RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 RIN2Q8WYP3 895 aaPredicted RBP20.2■□□□□ 0.82
CDKN1A-206ENST00000462537 ZMAT2Q96NC0 199 aaKnown RBP20.2■□□□□ 0.82
CDKN1A-206ENST00000462537 ACCSQ96QU6 501 aa20.2■□□□□ 0.82
CDKN1A-206ENST00000462537 PYM1Q9BRP8 204 aaKnown RBP20.2■□□□□ 0.82
CDKN1A-206ENST00000462537 MAGEF1Q9HAY2 307 aa20.2■□□□□ 0.82
CDKN1A-206ENST00000462537 KCNH3Q9ULD8 1083 aa20.2■□□□□ 0.82
CDKN1A-206ENST00000462537 PCDHB13Q9Y5F0 798 aa20.2■□□□□ 0.82
CDKN1A-206ENST00000462537 A0A0B4J269 797 aa20.19■□□□□ 0.82
CDKN1A-206ENST00000462537 TISP43B9A030 160 aa20.19■□□□□ 0.82
CDKN1A-206ENST00000462537 LILRB3O75022 631 aa20.19■□□□□ 0.82
CDKN1A-206ENST00000462537 B3GAT3O94766 335 aa20.19■□□□□ 0.82
CDKN1A-206ENST00000462537 SSTR3P32745 418 aaPredicted RBP20.19■□□□□ 0.82
CDKN1A-206ENST00000462537 SOX4Q06945 474 aaPredicted RBP20.19■□□□□ 0.82
CDKN1A-206ENST00000462537 ELAVL2Q12926 359 aaKnown RBP20.19■□□□□ 0.82
CDKN1A-206ENST00000462537 L1TD1Q5T7N2 865 aaKnown RBP20.19■□□□□ 0.82
CDKN1A-206ENST00000462537 FAM171A1Q5VUB5 890 aa20.19■□□□□ 0.82
CDKN1A-206ENST00000462537 ADALQ6DHV7 355 aa20.19■□□□□ 0.82
CDKN1A-206ENST00000462537 SLFN12LQ6IEE8 588 aa20.19■□□□□ 0.82
CDKN1A-206ENST00000462537 DCLRE1AQ6PJP8 1040 aa20.19■□□□□ 0.82
CDKN1A-206ENST00000462537 CEP57Q86XR8 500 aa20.19■□□□□ 0.82
CDKN1A-206ENST00000462537 CEP57L1Q8IYX8 460 aa20.19■□□□□ 0.82
CDKN1A-206ENST00000462537 SYCP3Q8IZU3 236 aa20.19■□□□□ 0.82
CDKN1A-206ENST00000462537 C18orf25Q96B23 403 aaPredicted RBP20.19■□□□□ 0.82
CDKN1A-206ENST00000462537 FAM212AQ96EL1 285 aa20.19■□□□□ 0.82
CDKN1A-206ENST00000462537 TRIM9Q9C026 710 aa20.19■□□□□ 0.82
CDKN1A-206ENST00000462537 SCAND2PQ9GZW5 306 aaPredicted RBP20.19■□□□□ 0.82
CDKN1A-206ENST00000462537 RPF1Q9H9Y2 349 aaKnown RBP20.19■□□□□ 0.82
CDKN1A-206ENST00000462537 CHST7Q9NS84 486 aa20.19■□□□□ 0.82
CDKN1A-206ENST00000462537 USP15Q9Y4E8 981 aaPredicted RBP20.19■□□□□ 0.82
CDKN1A-206ENST00000462537 TCHHQ07283 1943 aa20.19■□□□□ 0.82
CDKN1A-206ENST00000462537 PODXLO00592 558 aa20.18■□□□□ 0.82
CDKN1A-206ENST00000462537 MEFVO15553 781 aaPredicted RBP20.18■□□□□ 0.82
CDKN1A-206ENST00000462537 PPP1R37O75864 691 aa20.18■□□□□ 0.82
CDKN1A-206ENST00000462537 ADH1AP07327 375 aa20.18■□□□□ 0.82
CDKN1A-206ENST00000462537 HOXB8P17481 243 aaPredicted RBP20.18■□□□□ 0.82
CDKN1A-206ENST00000462537 AFMP43652 599 aa20.18■□□□□ 0.82
CDKN1A-206ENST00000462537 CASP5P51878 434 aa20.18■□□□□ 0.82
CDKN1A-206ENST00000462537 SPAG1Q07617 926 aa20.18■□□□□ 0.82
CDKN1A-206ENST00000462537 ALCAMQ13740 583 aa20.18■□□□□ 0.82
CDKN1A-206ENST00000462537 UPP1Q16831 310 aa20.18■□□□□ 0.82
CDKN1A-206ENST00000462537 ZBTB41Q5SVQ8 909 aa20.18■□□□□ 0.82
CDKN1A-206ENST00000462537 GLYCTKQ8IVS8 523 aa20.18■□□□□ 0.82
CDKN1A-206ENST00000462537 POMGNT1Q8WZA1 660 aa20.18■□□□□ 0.82
CDKN1A-206ENST00000462537 DDX27Q96GQ7 796 aaKnown RBP20.18■□□□□ 0.82
CDKN1A-206ENST00000462537 TTPALQ9BTX7 342 aa20.18■□□□□ 0.82
CDKN1A-206ENST00000462537 STRA6Q9BX79 667 aa20.18■□□□□ 0.82
CDKN1A-206ENST00000462537 IKZF4Q9H2S9 585 aa20.18■□□□□ 0.82
CDKN1A-206ENST00000462537 PLEKHA5Q9HAU0 1116 aa20.18■□□□□ 0.82
CDKN1A-206ENST00000462537 DZANK1Q9NVP4 752 aa20.18■□□□□ 0.82
CDKN1A-206ENST00000462537 PRKAG3Q9UGI9 489 aa20.18■□□□□ 0.82
CDKN1A-206ENST00000462537 AGO2Q9UKV8 859 aaKnown RBP20.18■□□□□ 0.82
CDKN1A-206ENST00000462537 A0A1B0GVL5 298 aa20.17■□□□□ 0.82
CDKN1A-206ENST00000462537 LACTBL1A8MY62 500 aa20.17■□□□□ 0.82
CDKN1A-206ENST00000462537 TMEM189-UBE2V1I3L0A0 370 aa20.17■□□□□ 0.82
CDKN1A-206ENST00000462537 TEX28O15482 410 aa20.17■□□□□ 0.82
CDKN1A-206ENST00000462537 FAM189A1O60320 539 aa20.17■□□□□ 0.82
CDKN1A-206ENST00000462537 PFKFB1P16118 471 aa20.17■□□□□ 0.82
CDKN1A-206ENST00000462537 CLCN4P51793 760 aa20.17■□□□□ 0.82
CDKN1A-206ENST00000462537 NUCB2P80303 420 aa20.17■□□□□ 0.82
CDKN1A-206ENST00000462537 CREMQ03060 361 aa20.17■□□□□ 0.82
CDKN1A-206ENST00000462537 KCNA1Q09470 495 aa20.17■□□□□ 0.82
CDKN1A-206ENST00000462537 RTP2Q5QGT7 225 aa20.17■□□□□ 0.82
CDKN1A-206ENST00000462537 SYCE2Q6PIF2 218 aa20.17■□□□□ 0.82
CDKN1A-206ENST00000462537 PRSS55Q6UWB4 352 aaPredicted RBP20.17■□□□□ 0.82
CDKN1A-206ENST00000462537 STXBP4Q6ZWJ1 553 aa20.17■□□□□ 0.82
CDKN1A-206ENST00000462537 SLC22A17Q8WUG5 538 aa20.17■□□□□ 0.82
CDKN1A-206ENST00000462537 KIF12Q96FN5 646 aa20.17■□□□□ 0.82
CDKN1A-206ENST00000462537 C7orf25Q9BPX7 421 aa20.17■□□□□ 0.82
CDKN1A-206ENST00000462537 FGFBP2Q9BYJ0 223 aa20.17■□□□□ 0.82
CDKN1A-206ENST00000462537 BLZF1Q9H2G9 400 aa20.17■□□□□ 0.82
CDKN1A-206ENST00000462537 RXFP1Q9HBX9 757 aa20.17■□□□□ 0.82
CDKN1A-206ENST00000462537 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.17■□□□□ 0.82
CDKN1A-206ENST00000462537 SERTAD1Q9UHV2 236 aa20.17■□□□□ 0.82
CDKN1A-206ENST00000462537 PLXNA3P51805 1871 aa20.17■□□□□ 0.82
CDKN1A-206ENST00000462537 TTC26A0AVF1 554 aa20.16■□□□□ 0.82
CDKN1A-206ENST00000462537 TRAPPC3O43617 180 aa20.16■□□□□ 0.82
CDKN1A-206ENST00000462537 PRPF6O94906 941 aaKnown RBP20.16■□□□□ 0.82
CDKN1A-206ENST00000462537 RPL17P18621 184 aaKnown RBP20.16■□□□□ 0.82
CDKN1A-206ENST00000462537 CMA1P23946 247 aa20.16■□□□□ 0.82
CDKN1A-206ENST00000462537 IGFBP6P24592 240 aaPredicted RBP20.16■□□□□ 0.82
CDKN1A-206ENST00000462537 ACOT2P49753 483 aa20.16■□□□□ 0.82
CDKN1A-206ENST00000462537 POSTNQ15063 836 aa20.16■□□□□ 0.82
CDKN1A-206ENST00000462537 ENOX2Q16206 610 aaKnown RBP20.16■□□□□ 0.82
CDKN1A-206ENST00000462537 RARS2Q5T160 578 aaKnown RBP20.16■□□□□ 0.82
CDKN1A-206ENST00000462537 ADHFE1Q8IWW8 467 aa20.16■□□□□ 0.82
CDKN1A-206ENST00000462537 C12orf76Q8N812 135 aaPredicted RBP20.16■□□□□ 0.82
CDKN1A-206ENST00000462537 C3orf58Q8NDZ4 430 aa20.16■□□□□ 0.82
CDKN1A-206ENST00000462537 HPS3Q969F9 1004 aa20.16■□□□□ 0.82
CDKN1A-206ENST00000462537 FBXL18Q96ME1 805 aa20.16■□□□□ 0.82
CDKN1A-206ENST00000462537 S1PR5Q9H228 398 aa20.16■□□□□ 0.82
CDKN1A-206ENST00000462537 TUBGCP4Q9UGJ1 667 aa20.16■□□□□ 0.82
CDKN1A-206ENST00000462537 CPSF3Q9UKF6 684 aaKnown RBP20.16■□□□□ 0.82
CDKN1A-206ENST00000462537 NUB1Q9Y5A7 615 aa20.16■□□□□ 0.82
CDKN1A-206ENST00000462537 I3L4J1 428 aa20.15■□□□□ 0.82
CDKN1A-206ENST00000462537 TULP1O00294 542 aaPredicted RBP20.15■□□□□ 0.82
CDKN1A-206ENST00000462537 GLUD1P00367 558 aa20.15■□□□□ 0.82
CDKN1A-206ENST00000462537 CASP1P29466 404 aa20.15■□□□□ 0.82
CDKN1A-206ENST00000462537 RPL9P32969 192 aaKnown RBP20.15■□□□□ 0.82
CDKN1A-206ENST00000462537 BRCC3P46736 316 aa20.15■□□□□ 0.82
CDKN1A-206ENST00000462537 ZP2Q05996 745 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms