RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 MAN1C1Q9NR34 630 aa16.81■□□□□ 0.28
VARS-219ENST00000461328 FAM13BQ9NYF5 915 aa16.81■□□□□ 0.28
VARS-219ENST00000461328 DPP7Q9UHL4 492 aa16.81■□□□□ 0.28
VARS-219ENST00000461328 RAPGEFL1Q9UHV5 662 aa16.81■□□□□ 0.28
VARS-219ENST00000461328 GAP43P17677 238 aa16.8■□□□□ 0.28
VARS-219ENST00000461328 KRT85P78386 507 aa16.8■□□□□ 0.28
VARS-219ENST00000461328 ELAVL2Q12926 359 aaKnown RBP16.8■□□□□ 0.28
VARS-219ENST00000461328 SEZ6Q53EL9 994 aa16.8■□□□□ 0.28
VARS-219ENST00000461328 FAM171A1Q5VUB5 890 aa16.8■□□□□ 0.28
VARS-219ENST00000461328 SHC4Q6S5L8 630 aa16.8■□□□□ 0.28
VARS-219ENST00000461328 GPR149Q86SP6 731 aa16.8■□□□□ 0.28
VARS-219ENST00000461328 CEP57Q86XR8 500 aa16.8■□□□□ 0.28
VARS-219ENST00000461328 SNX27Q96L92 541 aa16.8■□□□□ 0.28
VARS-219ENST00000461328 MRPL44Q9H9J2 332 aaKnown RBP16.8■□□□□ 0.28
VARS-219ENST00000461328 SLC38A7Q9NVC3 462 aa16.8■□□□□ 0.28
VARS-219ENST00000461328 TBC1D7Q9P0N9 293 aa16.8■□□□□ 0.28
VARS-219ENST00000461328 SEL1LQ9UBV2 794 aa16.8■□□□□ 0.28
VARS-219ENST00000461328 ATP6V1DQ9Y5K8 247 aa16.8■□□□□ 0.28
VARS-219ENST00000461328 SMIM28A0A1B0GU29 152 aa16.79■□□□□ 0.28
VARS-219ENST00000461328 ABLIM1O14639 778 aa16.79■□□□□ 0.28
VARS-219ENST00000461328 B3GAT3O94766 335 aa16.79■□□□□ 0.28
VARS-219ENST00000461328 MYBP10242 640 aa16.79■□□□□ 0.28
VARS-219ENST00000461328 CLCNKBP51801 687 aa16.79■□□□□ 0.28
VARS-219ENST00000461328 MCL1Q07820 350 aa16.79■□□□□ 0.28
VARS-219ENST00000461328 RTP2Q5QGT7 225 aa16.79■□□□□ 0.28
VARS-219ENST00000461328 PRSS55Q6UWB4 352 aaPredicted RBP16.79■□□□□ 0.28
VARS-219ENST00000461328 PALB2Q86YC2 1186 aa16.79■□□□□ 0.28
VARS-219ENST00000461328 MAP4K3Q8IVH8 894 aa16.79■□□□□ 0.28
VARS-219ENST00000461328 GLYCTKQ8IVS8 523 aa16.79■□□□□ 0.28
VARS-219ENST00000461328 IQUBQ8NA54 791 aa16.79■□□□□ 0.28
VARS-219ENST00000461328 STAMQ92783 540 aa16.79■□□□□ 0.28
VARS-219ENST00000461328 EDAQ92838 391 aa16.79■□□□□ 0.28
VARS-219ENST00000461328 UROC1Q96N76 676 aa16.79■□□□□ 0.28
VARS-219ENST00000461328 TTPALQ9BTX7 342 aa16.79■□□□□ 0.28
VARS-219ENST00000461328 LRRC27Q9C0I9 530 aa16.79■□□□□ 0.28
VARS-219ENST00000461328 TNMDQ9H2S6 317 aa16.79■□□□□ 0.28
VARS-219ENST00000461328 CUEDC2Q9H467 287 aa16.79■□□□□ 0.28
VARS-219ENST00000461328 FNIP2Q9P278 1114 aa16.79■□□□□ 0.28
VARS-219ENST00000461328 PCDHA7Q9UN72 937 aa16.79■□□□□ 0.28
VARS-219ENST00000461328 C2CD4DB7Z1M9 353 aa16.78■□□□□ 0.28
VARS-219ENST00000461328 TMEM189-UBE2V1I3L0A0 370 aa16.78■□□□□ 0.28
VARS-219ENST00000461328 GCNT3O95395 438 aa16.78■□□□□ 0.28
VARS-219ENST00000461328 SPATA31D3P0C874 917 aa16.78■□□□□ 0.28
VARS-219ENST00000461328 RPL17P18621 184 aaKnown RBP16.78■□□□□ 0.28
VARS-219ENST00000461328 GTF2BQ00403 316 aa16.78■□□□□ 0.28
VARS-219ENST00000461328 AMPD3Q01432 767 aa16.78■□□□□ 0.28
VARS-219ENST00000461328 ZC2HC1CQ53FD0 456 aaPredicted RBP16.78■□□□□ 0.28
VARS-219ENST00000461328 XKR4Q5GH76 650 aa16.78■□□□□ 0.28
VARS-219ENST00000461328 AXDND1Q5T1B0 1012 aaPredicted RBP16.78■□□□□ 0.28
VARS-219ENST00000461328 DCLRE1AQ6PJP8 1040 aa16.78■□□□□ 0.28
VARS-219ENST00000461328 SPATA31D4Q6ZUB0 917 aa16.78■□□□□ 0.28
VARS-219ENST00000461328 CCDC65Q8IXS2 484 aa16.78■□□□□ 0.28
VARS-219ENST00000461328 TDRD5Q8NAT2 981 aaKnown RBP16.78■□□□□ 0.28
VARS-219ENST00000461328 KCNN1Q92952 543 aa16.78■□□□□ 0.28
VARS-219ENST00000461328 HVCN1Q96D96 273 aa16.78■□□□□ 0.28
VARS-219ENST00000461328 DNAJC19Q96DA6 116 aa16.78■□□□□ 0.28
VARS-219ENST00000461328 SPATA32Q96LK8 384 aa16.78■□□□□ 0.28
VARS-219ENST00000461328 FIZ1Q96SL8 496 aa16.78■□□□□ 0.28
VARS-219ENST00000461328 MSTO1Q9BUK6 570 aa16.78■□□□□ 0.28
VARS-219ENST00000461328 GOLGA2P5Q9HBQ8 144 aa16.78■□□□□ 0.28
VARS-219ENST00000461328 PANK4Q9NVE7 773 aa16.78■□□□□ 0.28
VARS-219ENST00000461328 HCN4Q9Y3Q4 1203 aa16.78■□□□□ 0.28
VARS-219ENST00000461328 POLR2DO15514 142 aaKnown RBP16.77■□□□□ 0.28
VARS-219ENST00000461328 PIGRP01833 764 aa16.77■□□□□ 0.28
VARS-219ENST00000461328 CLTAP09496 248 aa16.77■□□□□ 0.28
VARS-219ENST00000461328 CXCL8P10145 99 aa16.77■□□□□ 0.28
VARS-219ENST00000461328 KCNE1P15382 129 aa16.77■□□□□ 0.28
VARS-219ENST00000461328 ASIC1P78348 528 aa16.77■□□□□ 0.28
VARS-219ENST00000461328 PPP2R3AQ06190 1150 aa16.77■□□□□ 0.28
VARS-219ENST00000461328 PSMD5Q16401 504 aa16.77■□□□□ 0.28
VARS-219ENST00000461328 KYAT1Q16773 422 aa16.77■□□□□ 0.28
VARS-219ENST00000461328 PTPN21Q16825 1174 aa16.77■□□□□ 0.28
VARS-219ENST00000461328 UPP1Q16831 310 aa16.77■□□□□ 0.28
VARS-219ENST00000461328 PDXDC1Q6P996 788 aa16.77■□□□□ 0.28
VARS-219ENST00000461328 ALKAL1Q6UXT8 129 aa16.77■□□□□ 0.28
VARS-219ENST00000461328 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.77■□□□□ 0.28
VARS-219ENST00000461328 C15orf39Q6ZRI6 1047 aa16.77■□□□□ 0.28
VARS-219ENST00000461328 CCDC149Q6ZUS6 474 aa16.77■□□□□ 0.28
VARS-219ENST00000461328 CMASQ8NFW8 434 aaPredicted RBP16.77■□□□□ 0.28
VARS-219ENST00000461328 FEZF2Q8TBJ5 459 aa16.77■□□□□ 0.28
VARS-219ENST00000461328 HDAC7Q8WUI4 952 aa16.77■□□□□ 0.28
VARS-219ENST00000461328 PIK3R5Q8WYR1 880 aa16.77■□□□□ 0.28
VARS-219ENST00000461328 DDX27Q96GQ7 796 aaKnown RBP16.77■□□□□ 0.28
VARS-219ENST00000461328 ZMAT2Q96NC0 199 aaKnown RBP16.77■□□□□ 0.28
VARS-219ENST00000461328 ST6GALNAC4Q9H4F1 302 aa16.77■□□□□ 0.28
VARS-219ENST00000461328 MAGEF1Q9HAY2 307 aa16.77■□□□□ 0.28
VARS-219ENST00000461328 CNTN3Q9P232 1028 aa16.77■□□□□ 0.28
VARS-219ENST00000461328 RCOR1Q9UKL0 485 aa16.77■□□□□ 0.28
VARS-219ENST00000461328 EXOC7Q9UPT5 735 aa16.77■□□□□ 0.28
VARS-219ENST00000461328 ZDHHC9Q9Y397 364 aa16.77■□□□□ 0.28
VARS-219ENST00000461328 PLXNA3P51805 1871 aa16.77■□□□□ 0.27
VARS-219ENST00000461328 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.76■□□□□ 0.27
VARS-219ENST00000461328 CCDC195A0A1B0GUA6 201 aa16.76■□□□□ 0.27
VARS-219ENST00000461328 OGTO15294 1046 aa16.76■□□□□ 0.27
VARS-219ENST00000461328 TGM5O43548 720 aa16.76■□□□□ 0.27
VARS-219ENST00000461328 TRAPPC3O43617 180 aa16.76■□□□□ 0.27
VARS-219ENST00000461328 C1RP00736 705 aa16.76■□□□□ 0.27
VARS-219ENST00000461328 ZXDAP98168 799 aa16.76■□□□□ 0.27
VARS-219ENST00000461328 SOX4Q06945 474 aaPredicted RBP16.76■□□□□ 0.27
VARS-219ENST00000461328 E2F4Q16254 413 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms