RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 PIAS3Q9Y6X2 628 aa19.04■□□□□ 0.64
TOP3A-202ENST00000461127 M0R2N6 131 aa19.03■□□□□ 0.64
TOP3A-202ENST00000461127 ZNF197O14709 1029 aa19.03■□□□□ 0.64
TOP3A-202ENST00000461127 ZBTB39O15060 712 aa19.03■□□□□ 0.64
TOP3A-202ENST00000461127 DGAT1O75907 488 aa19.03■□□□□ 0.64
TOP3A-202ENST00000461127 GCFC2P16383 781 aaKnown RBP19.03■□□□□ 0.64
TOP3A-202ENST00000461127 FGFR3P22607 806 aa19.03■□□□□ 0.64
TOP3A-202ENST00000461127 PMLP29590 882 aa19.03■□□□□ 0.64
TOP3A-202ENST00000461127 SATB1Q01826 763 aa19.03■□□□□ 0.64
TOP3A-202ENST00000461127 CYP4A11Q02928 519 aa19.03■□□□□ 0.64
TOP3A-202ENST00000461127 CTTNQ14247 550 aaKnown RBP19.03■□□□□ 0.64
TOP3A-202ENST00000461127 PPP4R3AQ6IN85 833 aa19.03■□□□□ 0.64
TOP3A-202ENST00000461127 BLOC1S2Q6QNY1 142 aa19.03■□□□□ 0.64
TOP3A-202ENST00000461127 CEP68Q76N32 757 aa19.03■□□□□ 0.64
TOP3A-202ENST00000461127 LONP2Q86WA8 852 aa19.03■□□□□ 0.64
TOP3A-202ENST00000461127 TPH2Q8IWU9 490 aa19.03■□□□□ 0.64
TOP3A-202ENST00000461127 FAM177A1Q8N128 213 aaPredicted RBP19.03■□□□□ 0.64
TOP3A-202ENST00000461127 ASAP3Q8TDY4 903 aa19.03■□□□□ 0.64
TOP3A-202ENST00000461127 PRIMPOLQ96LW4 560 aa19.03■□□□□ 0.64
TOP3A-202ENST00000461127 JAKMIP1Q96N16 626 aaKnown RBP19.03■□□□□ 0.64
TOP3A-202ENST00000461127 UPF2Q9HAU5 1272 aaKnown RBP19.03■□□□□ 0.64
TOP3A-202ENST00000461127 ZNF334Q9HCZ1 680 aaPredicted RBP19.03■□□□□ 0.64
TOP3A-202ENST00000461127 RALYQ9UKM9 306 aaKnown RBP19.03■□□□□ 0.64
TOP3A-202ENST00000461127 VWA8A3KMH1 1905 aa19.03■□□□□ 0.64
TOP3A-202ENST00000461127 CHURC1-FNTBB4DL54 471 aa19.02■□□□□ 0.64
TOP3A-202ENST00000461127 PRRG1O14668 218 aa19.02■□□□□ 0.64
TOP3A-202ENST00000461127 PTGESO14684 152 aa19.02■□□□□ 0.64
TOP3A-202ENST00000461127 TBX3O15119 743 aa19.02■□□□□ 0.64
TOP3A-202ENST00000461127 HRO43593 1189 aa19.02■□□□□ 0.64
TOP3A-202ENST00000461127 TRAPPC3O43617 180 aa19.02■□□□□ 0.64
TOP3A-202ENST00000461127 REC8O95072 547 aa19.02■□□□□ 0.64
TOP3A-202ENST00000461127 PSMC3P17980 439 aa19.02■□□□□ 0.64
TOP3A-202ENST00000461127 GDI1P31150 447 aa19.02■□□□□ 0.64
TOP3A-202ENST00000461127 ARL2P36404 184 aa19.02■□□□□ 0.64
TOP3A-202ENST00000461127 FNTBP49356 437 aa19.02■□□□□ 0.64
TOP3A-202ENST00000461127 LIMK1P53667 647 aa19.02■□□□□ 0.64
TOP3A-202ENST00000461127 CCT2P78371 535 aaKnown RBP19.02■□□□□ 0.64
TOP3A-202ENST00000461127 LRRC32Q14392 662 aa19.02■□□□□ 0.64
TOP3A-202ENST00000461127 TMEM132AQ24JP5 1023 aa19.02■□□□□ 0.64
TOP3A-202ENST00000461127 FAM78AQ5JUQ0 283 aa19.02■□□□□ 0.64
TOP3A-202ENST00000461127 N4BP2L1Q5TBK1 243 aaPredicted RBP19.02■□□□□ 0.64
TOP3A-202ENST00000461127 ANKS3Q6ZW76 656 aa19.02■□□□□ 0.64
TOP3A-202ENST00000461127 FBXL16Q8N461 479 aa19.02■□□□□ 0.64
TOP3A-202ENST00000461127 SPEM1Q8N4L4 309 aa19.02■□□□□ 0.64
TOP3A-202ENST00000461127 NAP1L4Q99733 375 aaKnown RBP19.02■□□□□ 0.64
TOP3A-202ENST00000461127 NCOA5Q9HCD5 579 aaKnown RBP19.02■□□□□ 0.64
TOP3A-202ENST00000461127 PRMT7Q9NVM4 692 aaPredicted RBP19.02■□□□□ 0.64
TOP3A-202ENST00000461127 BACE2Q9Y5Z0 518 aa19.02■□□□□ 0.64
TOP3A-202ENST00000461127 CEP295Q9C0D2 2601 aa19.02■□□□□ 0.63
TOP3A-202ENST00000461127 CCDC194A0A1B0GVG4 234 aa19.01■□□□□ 0.63
TOP3A-202ENST00000461127 N4BP3O15049 544 aa19.01■□□□□ 0.63
TOP3A-202ENST00000461127 MICAL2O94851 1124 aa19.01■□□□□ 0.63
TOP3A-202ENST00000461127 DEXIO95424 95 aa19.01■□□□□ 0.63
TOP3A-202ENST00000461127 GLRA2P23416 452 aa19.01■□□□□ 0.63
TOP3A-202ENST00000461127 FCARP24071 287 aa19.01■□□□□ 0.63
TOP3A-202ENST00000461127 C1orf228Q6PIY5 440 aa19.01■□□□□ 0.63
TOP3A-202ENST00000461127 NEK8Q86SG6 692 aa19.01■□□□□ 0.63
TOP3A-202ENST00000461127 MAP4K3Q8IVH8 894 aa19.01■□□□□ 0.63
TOP3A-202ENST00000461127 C12orf50Q8NA57 414 aaPredicted RBP19.01■□□□□ 0.63
TOP3A-202ENST00000461127 DEPDC1BQ8WUY9 529 aa19.01■□□□□ 0.63
TOP3A-202ENST00000461127 ASB16Q96NS5 453 aa19.01■□□□□ 0.63
TOP3A-202ENST00000461127 CORO1BQ9BR76 489 aa19.01■□□□□ 0.63
TOP3A-202ENST00000461127 SH2B1Q9NRF2 756 aaPredicted RBP19.01■□□□□ 0.63
TOP3A-202ENST00000461127 SNTG2Q9NY99 539 aa19.01■□□□□ 0.63
TOP3A-202ENST00000461127 ARHGEF37A1IGU5 675 aa19■□□□□ 0.63
TOP3A-202ENST00000461127 LRRIQ4A6NIV6 560 aa19■□□□□ 0.63
TOP3A-202ENST00000461127 ZNF263O14978 683 aa19■□□□□ 0.63
TOP3A-202ENST00000461127 CCNT1O60563 726 aaKnown RBP19■□□□□ 0.63
TOP3A-202ENST00000461127 RECQL4O94761 1208 aa19■□□□□ 0.63
TOP3A-202ENST00000461127 B3GAT3O94766 335 aa19■□□□□ 0.63
TOP3A-202ENST00000461127 BAG4O95429 457 aaKnown RBP19■□□□□ 0.63
TOP3A-202ENST00000461127 CHRNB1P11230 501 aa19■□□□□ 0.63
TOP3A-202ENST00000461127 COL9A2Q14055 689 aaPredicted RBP19■□□□□ 0.63
TOP3A-202ENST00000461127 CYP4A22Q5TCH4 519 aa19■□□□□ 0.63
TOP3A-202ENST00000461127 PDZD4Q76G19 769 aaPredicted RBP19■□□□□ 0.63
TOP3A-202ENST00000461127 SLFN12Q8IYM2 578 aa19■□□□□ 0.63
TOP3A-202ENST00000461127 ELMOD1Q8N336 334 aa19■□□□□ 0.63
TOP3A-202ENST00000461127 ZNF461Q8TAF7 563 aa19■□□□□ 0.63
TOP3A-202ENST00000461127 SMARCD2Q92925 531 aa19■□□□□ 0.63
TOP3A-202ENST00000461127 MSANTD3Q96H12 275 aa19■□□□□ 0.63
TOP3A-202ENST00000461127 ADPGKQ9BRR6 497 aa19■□□□□ 0.63
TOP3A-202ENST00000461127 ANKEF1Q9NU02 776 aa19■□□□□ 0.63
TOP3A-202ENST00000461127 TICRRQ7Z2Z1 1910 aa19■□□□□ 0.63
TOP3A-202ENST00000461127 TMEM189-UBE2V1I3L0A0 370 aa18.99■□□□□ 0.63
TOP3A-202ENST00000461127 CPLX1O14810 134 aa18.99■□□□□ 0.63
TOP3A-202ENST00000461127 PAPSS2O95340 614 aaPredicted RBP18.99■□□□□ 0.63
TOP3A-202ENST00000461127 SEC24BO95487 1268 aa18.99■□□□□ 0.63
TOP3A-202ENST00000461127 CCNE1P24864 410 aa18.99■□□□□ 0.63
TOP3A-202ENST00000461127 PDIA3P30101 505 aaKnown RBP18.99■□□□□ 0.63
TOP3A-202ENST00000461127 RBM25P49756 843 aaKnown RBP18.99■□□□□ 0.63
TOP3A-202ENST00000461127 MLLT6P55198 1093 aaPredicted RBP18.99■□□□□ 0.63
TOP3A-202ENST00000461127 SRSF5Q13243 272 aaKnown RBP18.99■□□□□ 0.63
TOP3A-202ENST00000461127 PRSS36Q5K4E3 855 aa18.99■□□□□ 0.63
TOP3A-202ENST00000461127 HEATR6Q6AI08 1181 aaKnown RBP18.99■□□□□ 0.63
TOP3A-202ENST00000461127 VITQ6UXI7 678 aa18.99■□□□□ 0.63
TOP3A-202ENST00000461127 PPP4R3CPQ6ZMV5 832 aa18.99■□□□□ 0.63
TOP3A-202ENST00000461127 ZBTB8OSQ8IWT0 167 aa18.99■□□□□ 0.63
TOP3A-202ENST00000461127 FAM160A2Q8N612 972 aaPredicted RBP18.99■□□□□ 0.63
TOP3A-202ENST00000461127 CSGALNACT1Q8TDX6 532 aa18.99■□□□□ 0.63
TOP3A-202ENST00000461127 HAS1Q92839 578 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms