RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 PPP2R3AQ06190 1150 aa22.43■■□□□ 1.18
RPUSD3-210ENST00000460909 SPAG1Q07617 926 aa22.43■■□□□ 1.18
RPUSD3-210ENST00000460909 HYAL1Q12794 435 aa22.43■■□□□ 1.18
RPUSD3-210ENST00000460909 COL19A1Q14993 1142 aa22.43■■□□□ 1.18
RPUSD3-210ENST00000460909 UPP1Q16831 310 aa22.43■■□□□ 1.18
RPUSD3-210ENST00000460909 KNOP1Q1ED39 458 aaKnown RBP22.43■■□□□ 1.18
RPUSD3-210ENST00000460909 SAAL1Q96ER3 474 aa22.43■■□□□ 1.18
RPUSD3-210ENST00000460909 PCIF1Q9H4Z3 704 aa22.43■■□□□ 1.18
RPUSD3-210ENST00000460909 NGRNQ9NPE2 291 aaKnown RBP22.43■■□□□ 1.18
RPUSD3-210ENST00000460909 AGPAT3Q9NRZ7 376 aa22.43■■□□□ 1.18
RPUSD3-210ENST00000460909 ADAM28Q9UKQ2 775 aa22.43■■□□□ 1.18
RPUSD3-210ENST00000460909 BRWD1Q9NSI6 2320 aa22.42■■□□□ 1.18
RPUSD3-210ENST00000460909 HIDE1A8MVS5 230 aa22.42■■□□□ 1.18
RPUSD3-210ENST00000460909 KIF4AO95239 1232 aa22.42■■□□□ 1.18
RPUSD3-210ENST00000460909 CTSAP10619 480 aa22.42■■□□□ 1.18
RPUSD3-210ENST00000460909 CLCNKBP51801 687 aa22.42■■□□□ 1.18
RPUSD3-210ENST00000460909 SNRPFP62306 86 aaKnown RBP22.42■■□□□ 1.18
RPUSD3-210ENST00000460909 ARMCX5Q6P1M9 558 aa22.42■■□□□ 1.18
RPUSD3-210ENST00000460909 CD300LGQ6UXG3 332 aa22.42■■□□□ 1.18
RPUSD3-210ENST00000460909 TAS1R1Q7RTX1 841 aa22.42■■□□□ 1.18
RPUSD3-210ENST00000460909 TMC7Q7Z402 723 aa22.42■■□□□ 1.18
RPUSD3-210ENST00000460909 CD302Q8IX05 232 aa22.42■■□□□ 1.18
RPUSD3-210ENST00000460909 MRPL43Q8N983 215 aaKnown RBP22.42■■□□□ 1.18
RPUSD3-210ENST00000460909 MICAL1Q8TDZ2 1067 aa22.42■■□□□ 1.18
RPUSD3-210ENST00000460909 UROC1Q96N76 676 aa22.42■■□□□ 1.18
RPUSD3-210ENST00000460909 TSPAN18Q96SJ8 248 aa22.42■■□□□ 1.18
RPUSD3-210ENST00000460909 FAM213AQ9BRX8 229 aa22.42■■□□□ 1.18
RPUSD3-210ENST00000460909 GPR62Q9BZJ7 368 aa22.42■■□□□ 1.18
RPUSD3-210ENST00000460909 PRDM6Q9NQX0 595 aa22.42■■□□□ 1.18
RPUSD3-210ENST00000460909 ENTPD7Q9NQZ7 604 aa22.42■■□□□ 1.18
RPUSD3-210ENST00000460909 STK39Q9UEW8 545 aa22.42■■□□□ 1.18
RPUSD3-210ENST00000460909 IRAK3Q9Y616 596 aa22.42■■□□□ 1.18
RPUSD3-210ENST00000460909 TMEM189-UBE2V1I3L0A0 370 aa22.41■■□□□ 1.18
RPUSD3-210ENST00000460909 EXTL3O43909 919 aa22.41■■□□□ 1.18
RPUSD3-210ENST00000460909 KINO60870 393 aaKnown RBP22.41■■□□□ 1.18
RPUSD3-210ENST00000460909 LDHAP00338 332 aaKnown RBP22.41■■□□□ 1.18
RPUSD3-210ENST00000460909 SOD2P04179 222 aa22.41■■□□□ 1.18
RPUSD3-210ENST00000460909 PLPP4Q5VZY2 271 aa22.41■■□□□ 1.18
RPUSD3-210ENST00000460909 DCLRE1AQ6PJP8 1040 aa22.41■■□□□ 1.18
RPUSD3-210ENST00000460909 TMEM130Q8N3G9 435 aa22.41■■□□□ 1.18
RPUSD3-210ENST00000460909 C3orf58Q8NDZ4 430 aa22.41■■□□□ 1.18
RPUSD3-210ENST00000460909 ERCC4Q92889 916 aaPredicted RBP22.41■■□□□ 1.18
RPUSD3-210ENST00000460909 CCDC47Q96A33 483 aaKnown RBP22.41■■□□□ 1.18
RPUSD3-210ENST00000460909 KCTD10Q9H3F6 313 aa22.41■■□□□ 1.18
RPUSD3-210ENST00000460909 ASB7Q9H672 318 aa22.41■■□□□ 1.18
RPUSD3-210ENST00000460909 CHST7Q9NS84 486 aa22.41■■□□□ 1.18
RPUSD3-210ENST00000460909 TUBGCP4Q9UGJ1 667 aa22.41■■□□□ 1.18
RPUSD3-210ENST00000460909 PCDHA5Q9Y5H7 936 aa22.41■■□□□ 1.18
RPUSD3-210ENST00000460909 GOLGA8IPA6NC78 632 aa22.4■■□□□ 1.18
RPUSD3-210ENST00000460909 C2orf71A6NGG8 1288 aa22.4■■□□□ 1.18
RPUSD3-210ENST00000460909 GOLGA8JA6NMD2 632 aa22.4■■□□□ 1.18
RPUSD3-210ENST00000460909 KIAA0391O15091 583 aaKnown RBP22.4■■□□□ 1.18
RPUSD3-210ENST00000460909 LILRB3O75022 631 aa22.4■■□□□ 1.18
RPUSD3-210ENST00000460909 CYP3A5P20815 502 aa22.4■■□□□ 1.18
RPUSD3-210ENST00000460909 GTF2F1P35269 517 aaKnown RBP eCLIP22.4■■□□□ 1.18
RPUSD3-210ENST00000460909 WNT7BP56706 349 aa22.4■■□□□ 1.18
RPUSD3-210ENST00000460909 SMC1AQ14683 1233 aaKnown RBP22.4■■□□□ 1.18
RPUSD3-210ENST00000460909 JADE1Q6IE81 842 aa22.4■■□□□ 1.18
RPUSD3-210ENST00000460909 FUT10Q6P4F1 479 aa22.4■■□□□ 1.18
RPUSD3-210ENST00000460909 C12orf56Q8IXR9 622 aa22.4■■□□□ 1.18
RPUSD3-210ENST00000460909 GPD1LQ8N335 351 aa22.4■■□□□ 1.18
RPUSD3-210ENST00000460909 HASPINQ8TF76 798 aa22.4■■□□□ 1.18
RPUSD3-210ENST00000460909 AUTS2Q8WXX7 1259 aa22.4■■□□□ 1.18
RPUSD3-210ENST00000460909 KIF12Q96FN5 646 aa22.4■■□□□ 1.18
RPUSD3-210ENST00000460909 DDX27Q96GQ7 796 aaKnown RBP22.4■■□□□ 1.18
RPUSD3-210ENST00000460909 FBXL18Q96ME1 805 aa22.4■■□□□ 1.18
RPUSD3-210ENST00000460909 GSDMAQ96QA5 445 aa22.4■■□□□ 1.18
RPUSD3-210ENST00000460909 HERC2P3Q9BVR0 1158 aa22.4■■□□□ 1.18
RPUSD3-210ENST00000460909 HSPBP1Q9NZL4 362 aa22.4■■□□□ 1.18
RPUSD3-210ENST00000460909 CGNQ9P2M7 1197 aaKnown RBP22.4■■□□□ 1.18
RPUSD3-210ENST00000460909 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.39■■□□□ 1.17
RPUSD3-210ENST00000460909 CLIC2O15247 247 aa22.39■■□□□ 1.17
RPUSD3-210ENST00000460909 TADA2AO75478 443 aa22.39■■□□□ 1.17
RPUSD3-210ENST00000460909 CXCL14O95715 111 aa22.39■■□□□ 1.17
RPUSD3-210ENST00000460909 NFICP08651 508 aa22.39■■□□□ 1.17
RPUSD3-210ENST00000460909 RPL9P32969 192 aaKnown RBP22.39■■□□□ 1.17
RPUSD3-210ENST00000460909 PTPN14Q15678 1187 aa22.39■■□□□ 1.17
RPUSD3-210ENST00000460909 CTC1Q2NKJ3 1217 aa22.39■■□□□ 1.17
RPUSD3-210ENST00000460909 KIAA0319Q5VV43 1072 aa22.39■■□□□ 1.17
RPUSD3-210ENST00000460909 HS2ST1Q7LGA3 356 aa22.39■■□□□ 1.17
RPUSD3-210ENST00000460909 BRSK2Q8IWQ3 736 aa22.39■■□□□ 1.17
RPUSD3-210ENST00000460909 FAM212AQ96EL1 285 aa22.39■■□□□ 1.17
RPUSD3-210ENST00000460909 UBQLN1Q9UMX0 589 aaKnown RBP22.39■■□□□ 1.17
RPUSD3-210ENST00000460909 DERAQ9Y315 318 aa22.39■■□□□ 1.17
RPUSD3-210ENST00000460909 C2CD2Q9Y426 696 aa22.39■■□□□ 1.17
RPUSD3-210ENST00000460909 PODXLO00592 558 aa22.38■■□□□ 1.17
RPUSD3-210ENST00000460909 B3GAT3O94766 335 aa22.38■■□□□ 1.17
RPUSD3-210ENST00000460909 LRPAP1P30533 357 aa22.38■■□□□ 1.17
RPUSD3-210ENST00000460909 NRIP1P48552 1158 aa22.38■■□□□ 1.17
RPUSD3-210ENST00000460909 SKIV2LQ15477 1246 aaKnown RBP22.38■■□□□ 1.17
RPUSD3-210ENST00000460909 DUSP6Q16828 381 aa22.38■■□□□ 1.17
RPUSD3-210ENST00000460909 SPATA1Q5VX52 437 aa22.38■■□□□ 1.17
RPUSD3-210ENST00000460909 RBM23Q86U06 439 aaKnown RBP22.38■■□□□ 1.17
RPUSD3-210ENST00000460909 CBWD2Q8IUF1 395 aa22.38■■□□□ 1.17
RPUSD3-210ENST00000460909 GUF1Q8N442 669 aaKnown RBP22.38■■□□□ 1.17
RPUSD3-210ENST00000460909 TMEM174Q8WUU8 243 aa22.38■■□□□ 1.17
RPUSD3-210ENST00000460909 TLE6Q9H808 572 aa22.38■■□□□ 1.17
RPUSD3-210ENST00000460909 LMBRD1Q9NUN5 540 aa22.38■■□□□ 1.17
RPUSD3-210ENST00000460909 HOOK1Q9UJC3 728 aaKnown RBP22.38■■□□□ 1.17
RPUSD3-210ENST00000460909 VWA8A3KMH1 1905 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms