RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 SPATA21Q7Z572 469 aa15.62■□□□□ 0.09
PTPRU-205ENST00000460170 RDM1Q8NG50 284 aa15.62■□□□□ 0.09
PTPRU-205ENST00000460170 PPWD1Q96BP3 646 aaKnown RBP15.62■□□□□ 0.09
PTPRU-205ENST00000460170 PACSIN1Q9BY11 444 aa15.62■□□□□ 0.09
PTPRU-205ENST00000460170 VPS11Q9H270 941 aa15.62■□□□□ 0.09
PTPRU-205ENST00000460170 FAM96AQ9H5X1 160 aa15.62■□□□□ 0.09
PTPRU-205ENST00000460170 ECT2Q9H8V3 914 aa15.62■□□□□ 0.09
PTPRU-205ENST00000460170 DMGDHQ9UI17 866 aaKnown RBP15.62■□□□□ 0.09
PTPRU-205ENST00000460170 ASB14A6NK59 587 aa15.61■□□□□ 0.09
PTPRU-205ENST00000460170 NOP14P78316 857 aaKnown RBP15.61■□□□□ 0.09
PTPRU-205ENST00000460170 ZNF677Q86XU0 584 aa15.61■□□□□ 0.09
PTPRU-205ENST00000460170 CASKIN2Q8WXE0 1202 aa15.61■□□□□ 0.09
PTPRU-205ENST00000460170 PRMT6Q96LA8 375 aaPredicted RBP15.61■□□□□ 0.09
PTPRU-205ENST00000460170 TAAR1Q96RJ0 339 aa15.61■□□□□ 0.09
PTPRU-205ENST00000460170 SERPINI1Q99574 410 aa15.61■□□□□ 0.09
PTPRU-205ENST00000460170 GCOM2Q9BZD3 368 aaPredicted RBP15.61■□□□□ 0.09
PTPRU-205ENST00000460170 C17orf75Q9HAS0 396 aa15.61■□□□□ 0.09
PTPRU-205ENST00000460170 SCOCQ9UIL1 159 aa15.61■□□□□ 0.09
PTPRU-205ENST00000460170 DBR1Q9UK59 544 aaKnown RBP15.61■□□□□ 0.09
PTPRU-205ENST00000460170 TBX20Q9UMR3 447 aa15.61■□□□□ 0.09
PTPRU-205ENST00000460170 LRRIQ3A6PVS8 624 aaPredicted RBP15.61■□□□□ 0.09
PTPRU-205ENST00000460170 PHF20L1A8MW92 1017 aa15.61■□□□□ 0.09
PTPRU-205ENST00000460170 ICAM1P05362 532 aa15.61■□□□□ 0.09
PTPRU-205ENST00000460170 MX2P20592 715 aa15.61■□□□□ 0.09
PTPRU-205ENST00000460170 PIGHQ14442 188 aaPredicted RBP15.61■□□□□ 0.09
PTPRU-205ENST00000460170 Q4G0T1 1027 aa15.61■□□□□ 0.09
PTPRU-205ENST00000460170 FOXP3Q9BZS1 431 aa15.61■□□□□ 0.09
PTPRU-205ENST00000460170 CREB3O43889 395 aa15.61■□□□□ 0.09
PTPRU-205ENST00000460170 AKAP3O75969 853 aa15.61■□□□□ 0.09
PTPRU-205ENST00000460170 MYL3P08590 195 aa15.61■□□□□ 0.09
PTPRU-205ENST00000460170 RFC5P40937 340 aa15.61■□□□□ 0.09
PTPRU-205ENST00000460170 ANKMY2Q8IV38 441 aa15.61■□□□□ 0.09
PTPRU-205ENST00000460170 CEP120Q8N960 986 aa15.61■□□□□ 0.09
PTPRU-205ENST00000460170 DHX38Q92620 1227 aaKnown RBP15.61■□□□□ 0.09
PTPRU-205ENST00000460170 DUSP9Q99956 384 aaKnown RBP15.61■□□□□ 0.09
PTPRU-205ENST00000460170 ARL2BPQ9Y2Y0 163 aa15.61■□□□□ 0.09
PTPRU-205ENST00000460170 RGL2O15211 777 aa15.61■□□□□ 0.09
PTPRU-205ENST00000460170 EXTL3O43909 919 aa15.61■□□□□ 0.09
PTPRU-205ENST00000460170 ZFXP17010 805 aaPredicted RBP15.61■□□□□ 0.09
PTPRU-205ENST00000460170 HSD17B3P37058 310 aa15.61■□□□□ 0.09
PTPRU-205ENST00000460170 PARP9Q8IXQ6 854 aa15.61■□□□□ 0.09
PTPRU-205ENST00000460170 MCEEQ96PE7 176 aa15.61■□□□□ 0.09
PTPRU-205ENST00000460170 CYTH2Q99418 400 aa15.61■□□□□ 0.09
PTPRU-205ENST00000460170 PI4K2AQ9BTU6 479 aa15.61■□□□□ 0.09
PTPRU-205ENST00000460170 CHORDC1Q9UHD1 332 aaPredicted RBP15.61■□□□□ 0.09
PTPRU-205ENST00000460170 CFLARO15519 480 aa15.6■□□□□ 0.09
PTPRU-205ENST00000460170 C4orf50Q6ZRC1 276 aa15.6■□□□□ 0.09
PTPRU-205ENST00000460170 ACAP3Q96P50 834 aa15.6■□□□□ 0.09
PTPRU-205ENST00000460170 EFHD1Q9BUP0 239 aa15.6■□□□□ 0.09
PTPRU-205ENST00000460170 ROPN1BQ9BZX4 212 aaPredicted RBP15.6■□□□□ 0.09
PTPRU-205ENST00000460170 ANKZF1Q9H8Y5 726 aa15.6■□□□□ 0.09
PTPRU-205ENST00000460170 ROPN1Q9HAT0 212 aaPredicted RBP15.6■□□□□ 0.09
PTPRU-205ENST00000460170 SMG5Q9UPR3 1016 aaKnown RBP15.6■□□□□ 0.09
PTPRU-205ENST00000460170 POLRMTO00411 1230 aaKnown RBP15.6■□□□□ 0.09
PTPRU-205ENST00000460170 SMIM24O75264 130 aa15.6■□□□□ 0.09
PTPRU-205ENST00000460170 ADORA2BP29275 332 aa15.6■□□□□ 0.09
PTPRU-205ENST00000460170 ARPP19P56211 112 aa15.6■□□□□ 0.09
PTPRU-205ENST00000460170 ACTN3Q08043 901 aaPredicted RBP15.6■□□□□ 0.09
PTPRU-205ENST00000460170 EPC2Q52LR7 807 aa15.6■□□□□ 0.09
PTPRU-205ENST00000460170 KLC3Q6P597 504 aa15.6■□□□□ 0.09
PTPRU-205ENST00000460170 ATG4CQ96DT6 458 aa15.6■□□□□ 0.09
PTPRU-205ENST00000460170 PNMA5Q96PV4 448 aa15.6■□□□□ 0.09
PTPRU-205ENST00000460170 KLC4Q9NSK0 619 aa15.6■□□□□ 0.09
PTPRU-205ENST00000460170 AGAP1Q9UPQ3 857 aa15.6■□□□□ 0.09
PTPRU-205ENST00000460170 NEU2Q9Y3R4 380 aa15.6■□□□□ 0.09
PTPRU-205ENST00000460170 LRRC10BA6NIK2 292 aa15.6■□□□□ 0.09
PTPRU-205ENST00000460170 S100BP04271 92 aaPredicted RBP15.6■□□□□ 0.09
PTPRU-205ENST00000460170 SEC24CP53992 1094 aa15.6■□□□□ 0.09
PTPRU-205ENST00000460170 COG7P83436 770 aa15.6■□□□□ 0.09
PTPRU-205ENST00000460170 NUDCD3Q8IVD9 361 aa15.6■□□□□ 0.09
PTPRU-205ENST00000460170 ATP6V1E2Q96A05 226 aa15.6■□□□□ 0.09
PTPRU-205ENST00000460170 BFARQ9NZS9 450 aa15.6■□□□□ 0.09
PTPRU-205ENST00000460170 TYW5A2RUC4 315 aaKnown RBP15.6■□□□□ 0.09
PTPRU-205ENST00000460170 KPNA7A9QM74 516 aa15.6■□□□□ 0.09
PTPRU-205ENST00000460170 TRIM66O15016 1216 aa15.6■□□□□ 0.09
PTPRU-205ENST00000460170 ARP10275 920 aa15.6■□□□□ 0.09
PTPRU-205ENST00000460170 KYNUQ16719 465 aa15.6■□□□□ 0.09
PTPRU-205ENST00000460170 SLC13A5Q86YT5 568 aaPredicted RBP15.6■□□□□ 0.09
PTPRU-205ENST00000460170 SLC13A1Q9BZW2 595 aa15.6■□□□□ 0.09
PTPRU-205ENST00000460170 DONSONQ9NYP3 566 aa15.6■□□□□ 0.09
PTPRU-205ENST00000460170 DDTLA6NHG4 134 aaPredicted RBP15.59■□□□□ 0.09
PTPRU-205ENST00000460170 ASAP2O43150 1006 aa15.59■□□□□ 0.09
PTPRU-205ENST00000460170 PDGFRAP16234 1089 aa15.59■□□□□ 0.09
PTPRU-205ENST00000460170 COILP38432 576 aaPredicted RBP15.59■□□□□ 0.09
PTPRU-205ENST00000460170 GMCL1P1Q8NEA9 526 aa15.59■□□□□ 0.09
PTPRU-205ENST00000460170 ZSWIM1Q9BR11 485 aa15.59■□□□□ 0.09
PTPRU-205ENST00000460170 APOL1O14791 398 aa15.59■□□□□ 0.09
PTPRU-205ENST00000460170 MKRN4PQ13434 485 aaPredicted RBP15.59■□□□□ 0.09
PTPRU-205ENST00000460170 SLC29A2Q14542 456 aa15.59■□□□□ 0.09
PTPRU-205ENST00000460170 HSP90AA5PQ58FG0 334 aa15.59■□□□□ 0.09
PTPRU-205ENST00000460170 EFHC2Q5JST6 749 aa15.59■□□□□ 0.09
PTPRU-205ENST00000460170 LRRN4CLQ8ND94 238 aa15.59■□□□□ 0.09
PTPRU-205ENST00000460170 GPRASP2Q96D09 838 aa15.59■□□□□ 0.09
PTPRU-205ENST00000460170 KIFC3Q9BVG8 833 aa15.59■□□□□ 0.09
PTPRU-205ENST00000460170 KCND1Q9NSA2 647 aa15.59■□□□□ 0.09
PTPRU-205ENST00000460170 STOML1Q9UBI4 398 aa15.59■□□□□ 0.09
PTPRU-205ENST00000460170 TPX2Q9ULW0 747 aaKnown RBP15.59■□□□□ 0.09
PTPRU-205ENST00000460170 CYTH3O43739 400 aa15.59■□□□□ 0.09
PTPRU-205ENST00000460170 SLC4A1P02730 911 aa15.59■□□□□ 0.09
PTPRU-205ENST00000460170 PAMP19021 973 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms