RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 ALKAL1Q6UXT8 129 aa23.68■■□□□ 1.38
SSNA1-202ENST00000459860 FMR1NBQ8N0W7 255 aaPredicted RBP23.68■■□□□ 1.38
SSNA1-202ENST00000459860 VPS52Q8N1B4 723 aa23.68■■□□□ 1.38
SSNA1-202ENST00000459860 CXCL16Q9H2A7 254 aa23.68■■□□□ 1.38
SSNA1-202ENST00000459860 SLC39A2Q9NP94 309 aa23.68■■□□□ 1.38
SSNA1-202ENST00000459860 MARCH5Q9NX47 278 aa23.68■■□□□ 1.38
SSNA1-202ENST00000459860 HOOK1Q9UJC3 728 aaKnown RBP23.68■■□□□ 1.38
SSNA1-202ENST00000459860 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.68■■□□□ 1.38
SSNA1-202ENST00000459860 FSCN2O14926 492 aa23.67■■□□□ 1.38
SSNA1-202ENST00000459860 XPOTO43592 962 aaKnown RBP23.67■■□□□ 1.38
SSNA1-202ENST00000459860 KLRC4O43908 158 aa23.67■■□□□ 1.38
SSNA1-202ENST00000459860 TADA2AO75478 443 aa23.67■■□□□ 1.38
SSNA1-202ENST00000459860 LDHAP00338 332 aaKnown RBP23.67■■□□□ 1.38
SSNA1-202ENST00000459860 RPN1P04843 607 aaKnown RBP23.67■■□□□ 1.38
SSNA1-202ENST00000459860 SLC10A6Q3KNW5 377 aa23.67■■□□□ 1.38
SSNA1-202ENST00000459860 PUS10Q3MIT2 529 aaKnown RBP23.67■■□□□ 1.38
SSNA1-202ENST00000459860 KMT5BQ4FZB7 885 aa23.67■■□□□ 1.38
SSNA1-202ENST00000459860 ARMCX5Q6P1M9 558 aa23.67■■□□□ 1.38
SSNA1-202ENST00000459860 CD302Q8IX05 232 aa23.67■■□□□ 1.38
SSNA1-202ENST00000459860 TMEM87AQ8NBN3 555 aa23.67■■□□□ 1.38
SSNA1-202ENST00000459860 GLIS3Q8NEA6 775 aa23.67■■□□□ 1.38
SSNA1-202ENST00000459860 ZBP1Q9H171 429 aa23.67■■□□□ 1.38
SSNA1-202ENST00000459860 CPSF3Q9UKF6 684 aaKnown RBP23.67■■□□□ 1.38
SSNA1-202ENST00000459860 ADAM28Q9UKQ2 775 aa23.67■■□□□ 1.38
SSNA1-202ENST00000459860 SF3B1O75533 1304 aaKnown RBP eCLIP23.66■■□□□ 1.38
SSNA1-202ENST00000459860 KIAA0391O15091 583 aaKnown RBP23.66■■□□□ 1.38
SSNA1-202ENST00000459860 FAM189A1O60320 539 aa23.66■■□□□ 1.38
SSNA1-202ENST00000459860 LTBRP36941 435 aa23.66■■□□□ 1.38
SSNA1-202ENST00000459860 NAB2Q15742 525 aa23.66■■□□□ 1.38
SSNA1-202ENST00000459860 EPM2AIP1Q7L775 607 aaPredicted RBP23.66■■□□□ 1.38
SSNA1-202ENST00000459860 ZNF507Q8TCN5 953 aa23.66■■□□□ 1.38
SSNA1-202ENST00000459860 FAM212AQ96EL1 285 aa23.66■■□□□ 1.38
SSNA1-202ENST00000459860 TSPAN18Q96SJ8 248 aa23.66■■□□□ 1.38
SSNA1-202ENST00000459860 IKZF4Q9H2S9 585 aa23.66■■□□□ 1.38
SSNA1-202ENST00000459860 TLE6Q9H808 572 aa23.66■■□□□ 1.38
SSNA1-202ENST00000459860 PCDHGC5Q9Y5F6 944 aa23.66■■□□□ 1.38
SSNA1-202ENST00000459860 ANK1P16157 1881 aa23.66■■□□□ 1.38
SSNA1-202ENST00000459860 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.65■■□□□ 1.38
SSNA1-202ENST00000459860 TTC26A0AVF1 554 aa23.65■■□□□ 1.38
SSNA1-202ENST00000459860 KINO60870 393 aaKnown RBP23.65■■□□□ 1.38
SSNA1-202ENST00000459860 SOD2P04179 222 aa23.65■■□□□ 1.38
SSNA1-202ENST00000459860 URODP06132 367 aa23.65■■□□□ 1.38
SSNA1-202ENST00000459860 PRR29P0C7W0 189 aa23.65■■□□□ 1.38
SSNA1-202ENST00000459860 CTSAP10619 480 aa23.65■■□□□ 1.38
SSNA1-202ENST00000459860 NRIP1P48552 1158 aa23.65■■□□□ 1.38
SSNA1-202ENST00000459860 ACOT2P49753 483 aa23.65■■□□□ 1.38
SSNA1-202ENST00000459860 DPYDQ12882 1025 aa23.65■■□□□ 1.38
SSNA1-202ENST00000459860 ENOX2Q16206 610 aaKnown RBP23.65■■□□□ 1.38
SSNA1-202ENST00000459860 CTC1Q2NKJ3 1217 aa23.65■■□□□ 1.38
SSNA1-202ENST00000459860 ZBTB41Q5SVQ8 909 aa23.65■■□□□ 1.38
SSNA1-202ENST00000459860 EP400NLQ6ZTU2 488 aa23.65■■□□□ 1.38
SSNA1-202ENST00000459860 HS2ST1Q7LGA3 356 aa23.65■■□□□ 1.38
SSNA1-202ENST00000459860 RBM23Q86U06 439 aaKnown RBP23.65■■□□□ 1.38
SSNA1-202ENST00000459860 RABGGTAQ92696 567 aa23.65■■□□□ 1.38
SSNA1-202ENST00000459860 KIF12Q96FN5 646 aa23.65■■□□□ 1.38
SSNA1-202ENST00000459860 DDX27Q96GQ7 796 aaKnown RBP23.65■■□□□ 1.38
SSNA1-202ENST00000459860 ZMAT2Q96NC0 199 aaKnown RBP23.65■■□□□ 1.38
SSNA1-202ENST00000459860 CDCA3Q99618 268 aaPredicted RBP23.65■■□□□ 1.38
SSNA1-202ENST00000459860 HERC2P3Q9BVR0 1158 aa23.65■■□□□ 1.38
SSNA1-202ENST00000459860 IGFLR1Q9H665 355 aa23.65■■□□□ 1.38
SSNA1-202ENST00000459860 TSHZ2Q9NRE2 1034 aa23.65■■□□□ 1.38
SSNA1-202ENST00000459860 SSX2IPQ9Y2D8 614 aa23.65■■□□□ 1.38
SSNA1-202ENST00000459860 KIF20AO95235 890 aa23.64■■□□□ 1.37
SSNA1-202ENST00000459860 KIF4AO95239 1232 aa23.64■■□□□ 1.37
SSNA1-202ENST00000459860 CXCL14O95715 111 aa23.64■■□□□ 1.37
SSNA1-202ENST00000459860 ADSSP30520 456 aa23.64■■□□□ 1.37
SSNA1-202ENST00000459860 POU5F1Q01860 360 aaKnown RBP23.64■■□□□ 1.37
SSNA1-202ENST00000459860 HYAL1Q12794 435 aa23.64■■□□□ 1.37
SSNA1-202ENST00000459860 KIAA1841Q6NSI8 718 aa23.64■■□□□ 1.37
SSNA1-202ENST00000459860 FUT10Q6P4F1 479 aa23.64■■□□□ 1.37
SSNA1-202ENST00000459860 ADGRD2Q7Z7M1 963 aa23.64■■□□□ 1.37
SSNA1-202ENST00000459860 NELFCDQ8IXH7 590 aa23.64■■□□□ 1.37
SSNA1-202ENST00000459860 ENGASEQ8NFI3 743 aa23.64■■□□□ 1.37
SSNA1-202ENST00000459860 NOC3LQ8WTT2 800 aaKnown RBP23.64■■□□□ 1.37
SSNA1-202ENST00000459860 SCFD1Q8WVM8 642 aa23.64■■□□□ 1.37
SSNA1-202ENST00000459860 TIGD1Q96MW7 591 aa23.64■■□□□ 1.37
SSNA1-202ENST00000459860 PAAF1Q9BRP4 392 aa23.64■■□□□ 1.37
SSNA1-202ENST00000459860 FAM213AQ9BRX8 229 aa23.64■■□□□ 1.37
SSNA1-202ENST00000459860 GOLGA2P5Q9HBQ8 144 aa23.64■■□□□ 1.37
SSNA1-202ENST00000459860 CLDND1Q9NY35 253 aa23.64■■□□□ 1.37
SSNA1-202ENST00000459860 CACNG4Q9UBN1 327 aa23.64■■□□□ 1.37
SSNA1-202ENST00000459860 UBQLN1Q9UMX0 589 aaKnown RBP23.64■■□□□ 1.37
SSNA1-202ENST00000459860 MYO7AQ13402 2215 aa23.64■■□□□ 1.37
SSNA1-202ENST00000459860 LACTBL1A8MY62 500 aa23.63■■□□□ 1.37
SSNA1-202ENST00000459860 SRGAP2BP0DMP2 458 aa23.63■■□□□ 1.37
SSNA1-202ENST00000459860 CLCNKBP51801 687 aa23.63■■□□□ 1.37
SSNA1-202ENST00000459860 SNRPFP62306 86 aaKnown RBP23.63■■□□□ 1.37
SSNA1-202ENST00000459860 ELAVL2Q12926 359 aaKnown RBP23.63■■□□□ 1.37
SSNA1-202ENST00000459860 SNW1Q13573 536 aaKnown RBP23.63■■□□□ 1.37
SSNA1-202ENST00000459860 BMT2Q1RMZ1 405 aa23.63■■□□□ 1.37
SSNA1-202ENST00000459860 DCLRE1AQ6PJP8 1040 aa23.63■■□□□ 1.37
SSNA1-202ENST00000459860 MRPL43Q8N983 215 aaKnown RBP23.63■■□□□ 1.37
SSNA1-202ENST00000459860 HASPINQ8TF76 798 aa23.63■■□□□ 1.37
SSNA1-202ENST00000459860 SAAL1Q96ER3 474 aa23.63■■□□□ 1.37
SSNA1-202ENST00000459860 CBWD1Q9BRT8 395 aa23.63■■□□□ 1.37
SSNA1-202ENST00000459860 VN1R3Q9BXE9 311 aa23.63■■□□□ 1.37
SSNA1-202ENST00000459860 MRPL17Q9NRX2 175 aaKnown RBP23.63■■□□□ 1.37
SSNA1-202ENST00000459860 RMND1Q9NWS8 449 aa23.63■■□□□ 1.37
SSNA1-202ENST00000459860 CGNQ9P2M7 1197 aaKnown RBP23.63■■□□□ 1.37
SSNA1-202ENST00000459860 HCN4Q9Y3Q4 1203 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms