RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 VSTM5A8MXK1 200 aa12.62□□□□□ -0.39
SYNE2-207ENST00000458046 CES2O00748 559 aa12.62□□□□□ -0.39
SYNE2-207ENST00000458046 CYP2J2P51589 502 aa12.62□□□□□ -0.39
SYNE2-207ENST00000458046 UAP1Q16222 522 aaPredicted RBP12.62□□□□□ -0.39
SYNE2-207ENST00000458046 ZNF354CQ86Y25 554 aa12.62□□□□□ -0.39
SYNE2-207ENST00000458046 THNSL2Q86YJ6 484 aa12.62□□□□□ -0.39
SYNE2-207ENST00000458046 CD302Q8IX05 232 aa12.62□□□□□ -0.39
SYNE2-207ENST00000458046 RDH13Q8NBN7 331 aa12.62□□□□□ -0.39
SYNE2-207ENST00000458046 LNX1Q8TBB1 728 aaPredicted RBP12.62□□□□□ -0.39
SYNE2-207ENST00000458046 FAM174AQ8TBP5 190 aa12.62□□□□□ -0.39
SYNE2-207ENST00000458046 PARD3BQ8TEW8 1205 aa12.62□□□□□ -0.39
SYNE2-207ENST00000458046 ZDHHC15Q96MV8 337 aa12.62□□□□□ -0.39
SYNE2-207ENST00000458046 SLC7A5P2Q9GIP4 190 aa12.62□□□□□ -0.39
SYNE2-207ENST00000458046 BCS1LQ9Y276 419 aa12.62□□□□□ -0.39
SYNE2-207ENST00000458046 TTI1O43156 1089 aa12.62□□□□□ -0.39
SYNE2-207ENST00000458046 CA12O43570 354 aa12.62□□□□□ -0.39
SYNE2-207ENST00000458046 SLITRK3O94933 977 aa12.62□□□□□ -0.39
SYNE2-207ENST00000458046 CFBP00751 764 aa12.62□□□□□ -0.39
SYNE2-207ENST00000458046 GH2P01242 217 aa12.62□□□□□ -0.39
SYNE2-207ENST00000458046 ZBTB48P10074 688 aaPredicted RBP12.62□□□□□ -0.39
SYNE2-207ENST00000458046 BMP3P12645 472 aa12.62□□□□□ -0.39
SYNE2-207ENST00000458046 CTNNA1P35221 906 aaKnown RBP12.62□□□□□ -0.39
SYNE2-207ENST00000458046 STAT1P42224 750 aa12.62□□□□□ -0.39
SYNE2-207ENST00000458046 PRPF4BQ13523 1007 aaKnown RBP12.62□□□□□ -0.39
SYNE2-207ENST00000458046 BMT2Q1RMZ1 405 aa12.62□□□□□ -0.39
SYNE2-207ENST00000458046 RSBN1LQ6PCB5 846 aaPredicted RBP12.62□□□□□ -0.39
SYNE2-207ENST00000458046 NT5DC3Q86UY8 548 aa12.62□□□□□ -0.39
SYNE2-207ENST00000458046 LMBR1Q8WVP7 490 aa12.62□□□□□ -0.39
SYNE2-207ENST00000458046 UBLCP1Q8WVY7 318 aaPredicted RBP12.62□□□□□ -0.39
SYNE2-207ENST00000458046 ZBTB10Q96DT7 871 aa12.62□□□□□ -0.39
SYNE2-207ENST00000458046 MKNK1Q9BUB5 465 aa12.62□□□□□ -0.39
SYNE2-207ENST00000458046 TRIM31Q9BZY9 425 aa12.62□□□□□ -0.39
SYNE2-207ENST00000458046 DPH5Q9H2P9 285 aa12.62□□□□□ -0.39
SYNE2-207ENST00000458046 SEPT11Q9NVA2 429 aaKnown RBP12.62□□□□□ -0.39
SYNE2-207ENST00000458046 ADAMTSL1Q8N6G6 1762 aa12.62□□□□□ -0.39
SYNE2-207ENST00000458046 MYH4Q9Y623 1939 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 A0A1W2PRG0 241 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 SYNDIG1LA6NDD5 238 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 GOLGA6L10A6NI86 522 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 BUB1BO60566 1050 aaPredicted RBP12.61□□□□□ -0.39
SYNE2-207ENST00000458046 ERLIN2O94905 339 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 RASGRP1O95267 797 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 TRIM49P0CI25 452 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 TRIM49CP0CI26 452 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 PSMC2P35998 433 aaKnown RBP12.61□□□□□ -0.39
SYNE2-207ENST00000458046 PLS1Q14651 629 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 DRAP1Q14919 205 aaPredicted RBP12.61□□□□□ -0.39
SYNE2-207ENST00000458046 TMEM179Q6ZVK1 233 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 SLC35G2Q8TBE7 412 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 LRRN4Q8WUT4 740 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 TMBIM4Q9HC24 238 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 ALG13Q9NP73 1137 aaKnown RBP12.61□□□□□ -0.39
SYNE2-207ENST00000458046 DNAJC12Q9UKB3 198 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 STXBP5LQ9Y2K9 1186 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 NR2E1Q9Y466 385 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 FOCADQ5VW36 1801 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 GCOM1H8Y6P7 765 aaPredicted RBP12.61□□□□□ -0.39
SYNE2-207ENST00000458046 SLC16A3O15427 465 aaKnown RBP12.61□□□□□ -0.39
SYNE2-207ENST00000458046 RASA4O43374 803 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 MYZAPP0CAP1 466 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 FERP16591 822 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 MZF1P28698 734 aaPredicted RBP12.61□□□□□ -0.39
SYNE2-207ENST00000458046 MDH1P40925 334 aaKnown RBP12.61□□□□□ -0.39
SYNE2-207ENST00000458046 ITGB3BPQ13352 177 aaPredicted RBP12.61□□□□□ -0.39
SYNE2-207ENST00000458046 CUL1Q13616 776 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 RRP1BQ14684 758 aaKnown RBP12.61□□□□□ -0.39
SYNE2-207ENST00000458046 ARHGAP44Q17R89 818 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 CBWD6Q4V339 395 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 CBWD3Q5JTY5 395 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 CBWD5Q5RIA9 395 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 IRGCQ6NXR0 463 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 TATDN1Q6P1N9 297 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 OTOP1Q7RTM1 612 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 SLFN11Q7Z7L1 901 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 GALNT5Q7Z7M9 940 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 HSD17B14Q9BPX1 270 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 HERPUD2Q9BSE4 406 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 WDR18Q9BV38 432 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 EPN3Q9H201 632 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 RPAP3Q9H6T3 665 aaPredicted RBP12.61□□□□□ -0.39
SYNE2-207ENST00000458046 PPANQ9NQ55 473 aaKnown RBP12.61□□□□□ -0.39
SYNE2-207ENST00000458046 FBXL5Q9UKA1 691 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 NENFQ9UMX5 172 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 DGKBQ9Y6T7 804 aa12.61□□□□□ -0.39
SYNE2-207ENST00000458046 A6NNZ2 444 aa12.6□□□□□ -0.39
SYNE2-207ENST00000458046 FGGP02679 453 aa12.6□□□□□ -0.39
SYNE2-207ENST00000458046 ATF7P17544 494 aaPredicted RBP12.6□□□□□ -0.39
SYNE2-207ENST00000458046 INPP5BP32019 993 aa12.6□□□□□ -0.39
SYNE2-207ENST00000458046 CIITAP33076 1130 aa12.6□□□□□ -0.39
SYNE2-207ENST00000458046 ECE1P42892 770 aa12.6□□□□□ -0.39
SYNE2-207ENST00000458046 TSPY1Q01534 308 aa12.6□□□□□ -0.39
SYNE2-207ENST00000458046 RAB33AQ14088 237 aa12.6□□□□□ -0.39
SYNE2-207ENST00000458046 DACT2Q5SW24 774 aa12.6□□□□□ -0.39
SYNE2-207ENST00000458046 LRCH2Q5VUJ6 765 aa12.6□□□□□ -0.39
SYNE2-207ENST00000458046 ZMAT2Q96NC0 199 aaKnown RBP12.6□□□□□ -0.39
SYNE2-207ENST00000458046 TDRD3Q9H7E2 651 aaKnown RBP12.6□□□□□ -0.39
SYNE2-207ENST00000458046 SUCLA2Q9P2R7 463 aaPredicted RBP12.6□□□□□ -0.39
SYNE2-207ENST00000458046 AMFRQ9UKV5 643 aa12.6□□□□□ -0.39
SYNE2-207ENST00000458046 ZMYM2Q9UBW7 1377 aa12.6□□□□□ -0.39
SYNE2-207ENST00000458046 IGSF9BQ9UPX0 1349 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms