RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 SPTLC3Q9NUV7 552 aa9.64□□□□□ -0.87
CDC42EP3-204ENST00000457889 NOD1Q9Y239 953 aa9.64□□□□□ -0.87
CDC42EP3-204ENST00000457889 DERAQ9Y315 318 aa9.64□□□□□ -0.87
CDC42EP3-204ENST00000457889 C2CD2Q9Y426 696 aa9.64□□□□□ -0.87
CDC42EP3-204ENST00000457889 MROH7Q68CQ1 1323 aa9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 A0A1W2PQ45 241 aaPredicted RBP9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 A0A1W2PQY0 241 aa9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 LRRC53A6NM62 1247 aa9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 KIF2AO00139 706 aaPredicted RBP9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 EPHB6O15197 1021 aa9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 GPR182O15218 404 aa9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 TNNC2P02585 160 aa9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 SERPING1P05155 500 aa9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 CCDC175P0C221 793 aa9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 HARSP12081 509 aaKnown RBP9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 FERP16591 822 aa9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 SLC9A1P19634 815 aa9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 TBXAS1P24557 533 aaPredicted RBP9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 PRKCIP41743 596 aa9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 STAT1P42224 750 aa9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 MFAP3P55082 362 aa9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 JAM2P57087 298 aa9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 PTPN21Q16825 1174 aa9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 WDR44Q5JSH3 913 aa9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 FAM26DQ5JW98 314 aa9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 EEF1DP3Q658K8 133 aa9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 FBXO46Q6PJ61 603 aaPredicted RBP9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 ZBTB33Q86T24 672 aa9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 VPS36Q86VN1 386 aa9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 LMO3Q8TAP4 145 aa9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 CAGE1Q8TC20 777 aa9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 DHX38Q92620 1227 aaKnown RBP9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 TAF4BQ92750 862 aa9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 ANKRD36BP1Q96IX9 119 aa9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 NT5C1BQ96P26 610 aa9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 ACAP3Q96P50 834 aa9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 TRAIPQ9BWF2 469 aa9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 PDE11AQ9HCR9 933 aa9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 SIX2Q9NPC8 291 aa9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 C1orf112Q9NSG2 853 aa9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 RAB20Q9NX57 234 aa9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 OGDHLQ9ULD0 1010 aa9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 PYCARDQ9ULZ3 195 aa9.63□□□□□ -0.87
CDC42EP3-204ENST00000457889 GRIN2DO15399 1336 aa9.62□□□□□ -0.87
CDC42EP3-204ENST00000457889 ATP8B3O60423 1300 aa9.62□□□□□ -0.87
CDC42EP3-204ENST00000457889 F8VZ95 297 aa9.62□□□□□ -0.87
CDC42EP3-204ENST00000457889 ARVCFO00192 962 aa9.62□□□□□ -0.87
CDC42EP3-204ENST00000457889 C4BPAP04003 597 aaKnown RBP9.62□□□□□ -0.87
CDC42EP3-204ENST00000457889 TMEM191BP0C7N4 346 aa9.62□□□□□ -0.87
CDC42EP3-204ENST00000457889 STAG3L1P0CL83 205 aa9.62□□□□□ -0.87
CDC42EP3-204ENST00000457889 SKIP12755 728 aa9.62□□□□□ -0.87
CDC42EP3-204ENST00000457889 HOXA11P31270 313 aaPredicted RBP9.62□□□□□ -0.87
CDC42EP3-204ENST00000457889 PIK3CAP42336 1068 aa9.62□□□□□ -0.87
CDC42EP3-204ENST00000457889 RAB27AP51159 221 aa9.62□□□□□ -0.87
CDC42EP3-204ENST00000457889 YARSP54577 528 aaKnown RBP9.62□□□□□ -0.87
CDC42EP3-204ENST00000457889 KRT83P78385 493 aa9.62□□□□□ -0.87
CDC42EP3-204ENST00000457889 ZNF200P98182 395 aaPredicted RBP9.62□□□□□ -0.87
CDC42EP3-204ENST00000457889 MGAT3Q09327 533 aa9.62□□□□□ -0.87
CDC42EP3-204ENST00000457889 BIRC3Q13489 604 aa9.62□□□□□ -0.87
CDC42EP3-204ENST00000457889 RAPGEF1Q13905 1077 aa9.62□□□□□ -0.87
CDC42EP3-204ENST00000457889 ENOX2Q16206 610 aaKnown RBP9.62□□□□□ -0.87
CDC42EP3-204ENST00000457889 ASIC2Q16515 512 aa9.62□□□□□ -0.87
CDC42EP3-204ENST00000457889 WDR59Q6PJI9 974 aa9.62□□□□□ -0.87
CDC42EP3-204ENST00000457889 THNSL1Q8IYQ7 743 aa9.62□□□□□ -0.87
CDC42EP3-204ENST00000457889 HS6ST3Q8IZP7 471 aa9.62□□□□□ -0.87
CDC42EP3-204ENST00000457889 CCAR2Q8N163 923 aaKnown RBP9.62□□□□□ -0.87
CDC42EP3-204ENST00000457889 DNAJC5GQ8N7S2 189 aa9.62□□□□□ -0.87
CDC42EP3-204ENST00000457889 ZSWIM2Q8NEG5 633 aa9.62□□□□□ -0.87
CDC42EP3-204ENST00000457889 SH3TC2Q8TF17 1288 aa9.62□□□□□ -0.87
CDC42EP3-204ENST00000457889 CCDC42Q96M95 316 aa9.62□□□□□ -0.87
CDC42EP3-204ENST00000457889 TRIM6Q9C030 488 aaPredicted RBP9.62□□□□□ -0.87
CDC42EP3-204ENST00000457889 UNC93B1Q9H1C4 597 aa9.62□□□□□ -0.87
CDC42EP3-204ENST00000457889 GINS2Q9Y248 185 aa9.62□□□□□ -0.87
CDC42EP3-204ENST00000457889 FHOD1Q9Y613 1164 aa9.62□□□□□ -0.87
CDC42EP3-204ENST00000457889 CDY2AQ9Y6F7 541 aa9.62□□□□□ -0.87
CDC42EP3-204ENST00000457889 TRIP12Q14669 1992 aaPredicted RBP9.62□□□□□ -0.87
CDC42EP3-204ENST00000457889 HTTP42858 3142 aa9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 EIF3CLB5ME19 914 aaKnown RBP9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 RNF225M0QZC1 329 aaPredicted RBP9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 XPOTO43592 962 aaKnown RBP9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 PHACTR2O75167 634 aa9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 RPS6KA5O75582 802 aa9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 NDUFA10O95299 355 aa9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 PARNO95453 639 aaKnown RBP9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 ACTN1P12814 892 aa9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 CCL5P13501 91 aa9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 ATICP31939 592 aa9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 SOX5P35711 763 aa9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 THPOP40225 353 aa9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 TNFSF9P41273 254 aa9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 KLHL30Q0D2K2 578 aa9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 TMEM62Q0P6H9 643 aa9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 NCOA4Q13772 614 aa9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 TRIM71Q2Q1W2 868 aaKnown RBP9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 ZBTB41Q5SVQ8 909 aa9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 C10orf76Q5T2E6 689 aa9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 TDRD10Q5VZ19 366 aaKnown RBP9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 IQCEQ6IPM2 695 aa9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 ZNF662Q6ZS27 426 aa9.61□□□□□ -0.87
CDC42EP3-204ENST00000457889 TTC39CQ8N584 583 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 184.1 ms