RNA–Protein interactions for RNA: ENST00000457212.5

FAM3A-217, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-217ENST00000457212 RDH13Q8NBN7 331 aa22.31■■□□□ 1.16
FAM3A-217ENST00000457212 KIF12Q96FN5 646 aa22.31■■□□□ 1.16
FAM3A-217ENST00000457212 MFSD14AQ96MC6 490 aa22.31■■□□□ 1.16
FAM3A-217ENST00000457212 ZNF558Q96NG5 402 aa22.31■■□□□ 1.16
FAM3A-217ENST00000457212 MKNK1Q9BUB5 465 aa22.31■■□□□ 1.16
FAM3A-217ENST00000457212 PLVAPQ9BX97 442 aa22.31■■□□□ 1.16
FAM3A-217ENST00000457212 HCSTQ9UBK5 93 aa22.31■■□□□ 1.16
FAM3A-217ENST00000457212 UBQLN1Q9UMX0 589 aaKnown RBP22.31■■□□□ 1.16
FAM3A-217ENST00000457212 PCDHB12Q9Y5F1 795 aa22.31■■□□□ 1.16
FAM3A-217ENST00000457212 LAMA3Q16787 3333 aa22.31■■□□□ 1.16
FAM3A-217ENST00000457212 NLRC5Q86WI3 1866 aa22.3■■□□□ 1.16
FAM3A-217ENST00000457212 KIAA1671Q9BY89 1806 aa22.3■■□□□ 1.16
FAM3A-217ENST00000457212 C5orf67F2Z3F1 127 aa22.3■■□□□ 1.16
FAM3A-217ENST00000457212 ZC3H11AO75152 810 aaKnown RBP eCLIP22.3■■□□□ 1.16
FAM3A-217ENST00000457212 ALDH2P05091 517 aa22.3■■□□□ 1.16
FAM3A-217ENST00000457212 CYP3A5P20815 502 aa22.3■■□□□ 1.16
FAM3A-217ENST00000457212 PPM1AP35813 382 aa22.3■■□□□ 1.16
FAM3A-217ENST00000457212 PSMC2P35998 433 aaKnown RBP22.3■■□□□ 1.16
FAM3A-217ENST00000457212 ALDH7A1P49419 539 aaKnown RBP22.3■■□□□ 1.16
FAM3A-217ENST00000457212 BCAR1P56945 870 aa22.3■■□□□ 1.16
FAM3A-217ENST00000457212 CYP24A1Q07973 514 aa22.3■■□□□ 1.16
FAM3A-217ENST00000457212 PSMD6Q15008 389 aa22.3■■□□□ 1.16
FAM3A-217ENST00000457212 JADE1Q6IE81 842 aa22.3■■□□□ 1.16
FAM3A-217ENST00000457212 KCNT2Q6UVM3 1135 aa22.3■■□□□ 1.16
FAM3A-217ENST00000457212 COLGALT1Q8NBJ5 622 aa22.3■■□□□ 1.16
FAM3A-217ENST00000457212 CEP63Q96MT8 703 aa22.3■■□□□ 1.16
FAM3A-217ENST00000457212 UROC1Q96N76 676 aa22.3■■□□□ 1.16
FAM3A-217ENST00000457212 CTNNB1P35222 781 aa22.29■■□□□ 1.16
FAM3A-217ENST00000457212 CASP4P49662 377 aa22.29■■□□□ 1.16
FAM3A-217ENST00000457212 ENPEPQ07075 957 aa22.29■■□□□ 1.16
FAM3A-217ENST00000457212 TMEM132DQ14C87 1099 aa22.29■■□□□ 1.16
FAM3A-217ENST00000457212 EPC2Q52LR7 807 aa22.29■■□□□ 1.16
FAM3A-217ENST00000457212 DDX27Q96GQ7 796 aaKnown RBP22.29■■□□□ 1.16
FAM3A-217ENST00000457212 LRCH3Q96II8 777 aa22.29■■□□□ 1.16
FAM3A-217ENST00000457212 DUSP9Q99956 384 aaKnown RBP22.29■■□□□ 1.16
FAM3A-217ENST00000457212 C17orf80Q9BSJ5 609 aa22.29■■□□□ 1.16
FAM3A-217ENST00000457212 ZNF576Q9H609 170 aa22.29■■□□□ 1.16
FAM3A-217ENST00000457212 PDE11AQ9HCR9 933 aa22.29■■□□□ 1.16
FAM3A-217ENST00000457212 DNAJB4Q9UDY4 337 aa22.29■■□□□ 1.16
FAM3A-217ENST00000457212 FAN1Q9Y2M0 1017 aa22.29■■□□□ 1.16
FAM3A-217ENST00000457212 SLC16A3O15427 465 aaKnown RBP22.28■■□□□ 1.16
FAM3A-217ENST00000457212 B4GALT3O60512 393 aa22.28■■□□□ 1.16
FAM3A-217ENST00000457212 AKAP3O75969 853 aa22.28■■□□□ 1.16
FAM3A-217ENST00000457212 FGFR1OPO95684 399 aaKnown RBP22.28■■□□□ 1.16
FAM3A-217ENST00000457212 GALTP07902 379 aa22.28■■□□□ 1.16
FAM3A-217ENST00000457212 NFICP08651 508 aa22.28■■□□□ 1.16
FAM3A-217ENST00000457212 EPB41P11171 864 aaKnown RBP22.28■■□□□ 1.16
FAM3A-217ENST00000457212 SLC11A1P49279 550 aa22.28■■□□□ 1.16
FAM3A-217ENST00000457212 STX17P56962 302 aa22.28■■□□□ 1.16
FAM3A-217ENST00000457212 TYRO3Q06418 890 aa22.28■■□□□ 1.16
FAM3A-217ENST00000457212 SPAG1Q07617 926 aa22.28■■□□□ 1.16
FAM3A-217ENST00000457212 ZNF697Q5TEC3 545 aa22.28■■□□□ 1.16
FAM3A-217ENST00000457212 SPATA1Q5VX52 437 aa22.28■■□□□ 1.16
FAM3A-217ENST00000457212 INTS8Q75QN2 995 aaKnown RBP22.28■■□□□ 1.16
FAM3A-217ENST00000457212 USP37Q86T82 979 aa22.28■■□□□ 1.16
FAM3A-217ENST00000457212 FAM186BQ8IYM0 893 aa22.28■■□□□ 1.16
FAM3A-217ENST00000457212 CSGALNACT2Q8N6G5 542 aa22.28■■□□□ 1.16
FAM3A-217ENST00000457212 BEST2Q8NFU1 509 aa22.28■■□□□ 1.16
FAM3A-217ENST00000457212 CACTINQ8WUQ7 758 aaKnown RBP22.28■■□□□ 1.16
FAM3A-217ENST00000457212 FNBP1Q96RU3 617 aa22.28■■□□□ 1.16
FAM3A-217ENST00000457212 CCDC192P0DO97 292 aa22.27■■□□□ 1.16
FAM3A-217ENST00000457212 RPL9P32969 192 aaKnown RBP22.27■■□□□ 1.16
FAM3A-217ENST00000457212 OR1G1P47890 313 aa22.27■■□□□ 1.16
FAM3A-217ENST00000457212 WNT7BP56706 349 aa22.27■■□□□ 1.16
FAM3A-217ENST00000457212 FILIP1Q7Z7B0 1213 aa22.27■■□□□ 1.16
FAM3A-217ENST00000457212 WDR49Q8IV35 697 aa22.27■■□□□ 1.16
FAM3A-217ENST00000457212 SLC39A11Q8N1S5 342 aa22.27■■□□□ 1.16
FAM3A-217ENST00000457212 FBXO22Q8NEZ5 403 aa22.27■■□□□ 1.16
FAM3A-217ENST00000457212 TMC2Q8TDI7 906 aa22.27■■□□□ 1.16
FAM3A-217ENST00000457212 C18orf25Q96B23 403 aaPredicted RBP22.27■■□□□ 1.16
FAM3A-217ENST00000457212 C11orf84Q9BUA3 381 aaPredicted RBP22.27■■□□□ 1.16
FAM3A-217ENST00000457212 COLEC11Q9BWP8 271 aa22.27■■□□□ 1.16
FAM3A-217ENST00000457212 SPG21Q9NZD8 308 aa22.27■■□□□ 1.16
FAM3A-217ENST00000457212 CHD9Q3L8U1 2897 aa22.26■■□□□ 1.15
FAM3A-217ENST00000457212 CASTOR2A6NHX0 329 aa22.26■■□□□ 1.15
FAM3A-217ENST00000457212 NRP1O14786 923 aa22.26■■□□□ 1.15
FAM3A-217ENST00000457212 KRT13P13646 458 aa22.26■■□□□ 1.15
FAM3A-217ENST00000457212 LRPAP1P30533 357 aa22.26■■□□□ 1.15
FAM3A-217ENST00000457212 MCCD1P59942 119 aaPredicted RBP22.26■■□□□ 1.15
FAM3A-217ENST00000457212 SOX4Q06945 474 aaPredicted RBP22.26■■□□□ 1.15
FAM3A-217ENST00000457212 EFCAB13Q8IY85 973 aa22.26■■□□□ 1.15
FAM3A-217ENST00000457212 CCDC127Q96BQ5 260 aa22.26■■□□□ 1.15
FAM3A-217ENST00000457212 CGRRF1Q99675 332 aa22.26■■□□□ 1.15
FAM3A-217ENST00000457212 MTUS1Q9ULD2 1270 aa22.26■■□□□ 1.15
FAM3A-217ENST00000457212 SYCE3A1L190 88 aa22.25■■□□□ 1.15
FAM3A-217ENST00000457212 TULP1O00294 542 aaPredicted RBP22.25■■□□□ 1.15
FAM3A-217ENST00000457212 GNA14O95837 355 aa22.25■■□□□ 1.15
FAM3A-217ENST00000457212 AP3M2P53677 418 aa22.25■■□□□ 1.15
FAM3A-217ENST00000457212 CLDN10P78369 228 aa22.25■■□□□ 1.15
FAM3A-217ENST00000457212 TFAMQ00059 246 aaKnown RBP22.25■■□□□ 1.15
FAM3A-217ENST00000457212 PLCB3Q01970 1234 aa22.25■■□□□ 1.15
FAM3A-217ENST00000457212 DUOXA2Q1HG44 320 aa22.25■■□□□ 1.15
FAM3A-217ENST00000457212 ZSCAN23Q3MJ62 389 aa22.25■■□□□ 1.15
FAM3A-217ENST00000457212 DCLRE1AQ6PJP8 1040 aa22.25■■□□□ 1.15
FAM3A-217ENST00000457212 SPRED2Q7Z698 418 aa22.25■■□□□ 1.15
FAM3A-217ENST00000457212 KLHL23Q8NBE8 558 aa22.25■■□□□ 1.15
FAM3A-217ENST00000457212 PARD3BQ8TEW8 1205 aa22.25■■□□□ 1.15
FAM3A-217ENST00000457212 ARNTL2Q8WYA1 636 aa22.25■■□□□ 1.15
FAM3A-217ENST00000457212 TMEM169Q96HH4 297 aa22.25■■□□□ 1.15
FAM3A-217ENST00000457212 ANKRD36BP1Q96IX9 119 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms