RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 ADGBQ8N7X0 1667 aa5.98□□□□□ -1.45
VPS41-209ENST00000457055 SAMD9Q5K651 1589 aa5.97□□□□□ -1.45
VPS41-209ENST00000457055 TMEM94Q12767 1356 aa5.97□□□□□ -1.45
VPS41-209ENST00000457055 TNRQ92752 1358 aa5.97□□□□□ -1.45
VPS41-209ENST00000457055 F5H423 210 aaPredicted RBP5.97□□□□□ -1.45
VPS41-209ENST00000457055 POLR3GO15318 223 aaPredicted RBP5.97□□□□□ -1.45
VPS41-209ENST00000457055 APBB3O95704 486 aa5.97□□□□□ -1.45
VPS41-209ENST00000457055 IL33O95760 270 aa5.97□□□□□ -1.45
VPS41-209ENST00000457055 TNNT1P13805 278 aa5.97□□□□□ -1.45
VPS41-209ENST00000457055 PHKG2P15735 406 aa5.97□□□□□ -1.45
VPS41-209ENST00000457055 MUTP22033 750 aa5.97□□□□□ -1.45
VPS41-209ENST00000457055 ETFBP38117 255 aa5.97□□□□□ -1.45
VPS41-209ENST00000457055 STAT3P40763 770 aa5.97□□□□□ -1.45
VPS41-209ENST00000457055 RWDD2BP57060 319 aa5.97□□□□□ -1.45
VPS41-209ENST00000457055 ZNF280AP59817 542 aaPredicted RBP5.97□□□□□ -1.45
VPS41-209ENST00000457055 POLR2FP61218 127 aaKnown RBP5.97□□□□□ -1.45
VPS41-209ENST00000457055 CACNB2Q08289 660 aaPredicted RBP5.97□□□□□ -1.45
VPS41-209ENST00000457055 POSTNQ15063 836 aa5.97□□□□□ -1.45
VPS41-209ENST00000457055 GNPTABQ3T906 1256 aa5.97□□□□□ -1.45
VPS41-209ENST00000457055 KDELC1Q6UW63 502 aa5.97□□□□□ -1.45
VPS41-209ENST00000457055 DSTYKQ6XUX3 929 aa5.97□□□□□ -1.45
VPS41-209ENST00000457055 CCDC81Q6ZN84 652 aa5.97□□□□□ -1.45
VPS41-209ENST00000457055 FASTKD5Q7L8L6 764 aaKnown RBP5.97□□□□□ -1.45
VPS41-209ENST00000457055 B3GNT8Q7Z7M8 397 aa5.97□□□□□ -1.45
VPS41-209ENST00000457055 TBC1D1Q86TI0 1168 aaPredicted RBP5.97□□□□□ -1.45
VPS41-209ENST00000457055 FAM26EQ8N5C1 309 aa5.97□□□□□ -1.45
VPS41-209ENST00000457055 GBP7Q8N8V2 638 aaPredicted RBP5.97□□□□□ -1.45
VPS41-209ENST00000457055 HNRNPLLQ8WVV9 542 aaKnown RBP5.97□□□□□ -1.45
VPS41-209ENST00000457055 ZNF606Q8WXB4 792 aa5.97□□□□□ -1.45
VPS41-209ENST00000457055 EPSTI1Q96J88 318 aa5.97□□□□□ -1.45
VPS41-209ENST00000457055 SEC16BQ96JE7 1060 aa5.97□□□□□ -1.45
VPS41-209ENST00000457055 CRBNQ96SW2 442 aa5.97□□□□□ -1.45
VPS41-209ENST00000457055 MCMBPQ9BTE3 642 aa5.97□□□□□ -1.45
VPS41-209ENST00000457055 GBP3Q9H0R5 595 aa5.97□□□□□ -1.45
VPS41-209ENST00000457055 BCAS3Q9H6U6 928 aa5.97□□□□□ -1.45
VPS41-209ENST00000457055 MTRRQ9UBK8 725 aa5.97□□□□□ -1.45
VPS41-209ENST00000457055 LAMP5Q9UJQ1 280 aa5.97□□□□□ -1.45
VPS41-209ENST00000457055 RWDD3Q9Y3V2 267 aa5.97□□□□□ -1.45
VPS41-209ENST00000457055 MTF2Q9Y483 593 aaPredicted RBP5.97□□□□□ -1.45
VPS41-209ENST00000457055 PCDHGB3Q9Y5G1 929 aa5.97□□□□□ -1.45
VPS41-209ENST00000457055 EPN1Q9Y6I3 576 aaPredicted RBP5.97□□□□□ -1.45
VPS41-209ENST00000457055 UGGT1Q9NYU2 1555 aa5.97□□□□□ -1.45
VPS41-209ENST00000457055 SH3D21A4FU49 640 aa5.96□□□□□ -1.46
VPS41-209ENST00000457055 HNRNPCL2B2RXH8 293 aa5.96□□□□□ -1.46
VPS41-209ENST00000457055 APAF1O14727 1248 aa5.96□□□□□ -1.46
VPS41-209ENST00000457055 AURKAO14965 403 aa5.96□□□□□ -1.46
VPS41-209ENST00000457055 HNRNPCL1O60812 293 aaKnown RBP5.96□□□□□ -1.46
VPS41-209ENST00000457055 MYBL2P10244 700 aa5.96□□□□□ -1.46
VPS41-209ENST00000457055 GZMAP12544 262 aa5.96□□□□□ -1.46
VPS41-209ENST00000457055 EEF2P13639 858 aaKnown RBP5.96□□□□□ -1.46
VPS41-209ENST00000457055 SKIV2L2P42285 1042 aaKnown RBP5.96□□□□□ -1.46
VPS41-209ENST00000457055 NASPP49321 788 aaPredicted RBP5.96□□□□□ -1.46
VPS41-209ENST00000457055 DEUP1Q05D60 604 aa5.96□□□□□ -1.46
VPS41-209ENST00000457055 G3BP1Q13283 466 aaKnown RBP eCLIP5.96□□□□□ -1.46
VPS41-209ENST00000457055 SAFBQ15424 915 aaKnown RBP eCLIP5.96□□□□□ -1.46
VPS41-209ENST00000457055 CCNG2Q16589 344 aa5.96□□□□□ -1.46
VPS41-209ENST00000457055 SHROOM1Q2M3G4 852 aaPredicted RBP5.96□□□□□ -1.46
VPS41-209ENST00000457055 BOLA3Q53S33 107 aa5.96□□□□□ -1.46
VPS41-209ENST00000457055 MUM1L1Q5H9M0 696 aa5.96□□□□□ -1.46
VPS41-209ENST00000457055 ANGPTL8Q6UXH0 198 aa5.96□□□□□ -1.46
VPS41-209ENST00000457055 BRINP3Q76B58 766 aa5.96□□□□□ -1.46
VPS41-209ENST00000457055 CCDC186Q7Z3E2 898 aa5.96□□□□□ -1.46
VPS41-209ENST00000457055 ZBTB46Q86UZ6 589 aa5.96□□□□□ -1.46
VPS41-209ENST00000457055 THNSL2Q86YJ6 484 aa5.96□□□□□ -1.46
VPS41-209ENST00000457055 LZTR1Q8N653 840 aa5.96□□□□□ -1.46
VPS41-209ENST00000457055 GOLGA5Q8TBA6 731 aa5.96□□□□□ -1.46
VPS41-209ENST00000457055 CCT6BQ92526 530 aa5.96□□□□□ -1.46
VPS41-209ENST00000457055 LRRC45Q96CN5 670 aa5.96□□□□□ -1.46
VPS41-209ENST00000457055 TSPAN17Q96FV3 270 aa5.96□□□□□ -1.46
VPS41-209ENST00000457055 CAMKK2Q96RR4 588 aa5.96□□□□□ -1.46
VPS41-209ENST00000457055 CRACR2AQ9BSW2 395 aa5.96□□□□□ -1.46
VPS41-209ENST00000457055 KCTD10Q9H3F6 313 aa5.96□□□□□ -1.46
VPS41-209ENST00000457055 NFKBIL1Q9UBC1 381 aaPredicted RBP5.96□□□□□ -1.46
VPS41-209ENST00000457055 NUDT5Q9UKK9 219 aa5.96□□□□□ -1.46
VPS41-209ENST00000457055 DMTF1Q9Y222 760 aa5.96□□□□□ -1.46
VPS41-209ENST00000457055 FAM50BQ9Y247 325 aa5.96□□□□□ -1.46
VPS41-209ENST00000457055 SLC12A7Q9Y666 1083 aa5.96□□□□□ -1.46
VPS41-209ENST00000457055 SPATA31A6Q5VVP1 1343 aa5.96□□□□□ -1.46
VPS41-209ENST00000457055 SHPRHQ149N8 1683 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 FSD2A1L4K1 749 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 ASMTLO95671 621 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 GUCA1CO95843 209 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 P4HA1P13674 534 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 CHKAP35790 457 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 CD86P42081 329 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 MTHFRP42898 656 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 MAN2A2P49641 1150 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 SEPHS1P49903 392 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 HNRNPMP52272 730 aaKnown RBP eCLIP5.95□□□□□ -1.46
VPS41-209ENST00000457055 CTAG1AP78358 180 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 DLX2Q07687 328 aaPredicted RBP5.95□□□□□ -1.46
VPS41-209ENST00000457055 FAPQ12884 760 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 TCIRG1Q13488 830 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 SEMA3AQ14563 771 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 PPP1R7Q15435 360 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 OASLQ15646 514 aaKnown RBP5.95□□□□□ -1.46
VPS41-209ENST00000457055 CLUL1Q15846 466 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 INAQ16352 499 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 DPY19L1Q2PZI1 675 aa5.95□□□□□ -1.46
VPS41-209ENST00000457055 NBPF8Q3BBV2 869 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms