RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 NAB2Q15742 525 aa25.67■■□□□ 1.7
PTPRA-208ENST00000455631 LAIR1Q6GTX8 287 aa25.67■■□□□ 1.7
PTPRA-208ENST00000455631 RTL10Q7L3V2 364 aa25.67■■□□□ 1.7
PTPRA-208ENST00000455631 MAEAQ7L5Y9 396 aa25.67■■□□□ 1.7
PTPRA-208ENST00000455631 PDZD7Q9H5P4 517 aa25.67■■□□□ 1.7
PTPRA-208ENST00000455631 BRD9Q9H8M2 597 aa25.67■■□□□ 1.7
PTPRA-208ENST00000455631 GPRC5CQ9NQ84 441 aa25.67■■□□□ 1.7
PTPRA-208ENST00000455631 LOC105378220A0A1B0GUY1 285 aaPredicted RBP25.66■■□□□ 1.7
PTPRA-208ENST00000455631 MAN2B1O00754 1011 aa25.66■■□□□ 1.7
PTPRA-208ENST00000455631 N4BP3O15049 544 aa25.66■■□□□ 1.7
PTPRA-208ENST00000455631 FGFR3P22607 806 aa25.66■■□□□ 1.7
PTPRA-208ENST00000455631 RUFY3Q7L099 469 aa25.66■■□□□ 1.7
PTPRA-208ENST00000455631 ZBTB8OSQ8IWT0 167 aa25.66■■□□□ 1.7
PTPRA-208ENST00000455631 OXER1Q8TDS5 423 aa25.66■■□□□ 1.7
PTPRA-208ENST00000455631 CHAMP1Q96JM3 812 aa25.66■■□□□ 1.7
PTPRA-208ENST00000455631 SLC30A4O14863 429 aa25.65■■□□□ 1.7
PTPRA-208ENST00000455631 B3GAT3O94766 335 aa25.65■■□□□ 1.7
PTPRA-208ENST00000455631 POTEHQ6S545 545 aa25.65■■□□□ 1.7
PTPRA-208ENST00000455631 NOSTRINQ8IVI9 506 aa25.65■■□□□ 1.7
PTPRA-208ENST00000455631 CELF5Q8N6W0 485 aaKnown RBP25.65■■□□□ 1.7
PTPRA-208ENST00000455631 PIGOQ8TEQ8 1089 aa25.65■■□□□ 1.7
PTPRA-208ENST00000455631 ZNF274Q96GC6 653 aaPredicted RBP25.65■■□□□ 1.7
PTPRA-208ENST00000455631 HSD17B14Q9BPX1 270 aa25.65■■□□□ 1.7
PTPRA-208ENST00000455631 TICRRQ7Z2Z1 1910 aa25.65■■□□□ 1.7
PTPRA-208ENST00000455631 ZFHX4Q86UP3 3567 aa25.64■■□□□ 1.7
PTPRA-208ENST00000455631 COL4A2P08572 1712 aa25.64■■□□□ 1.7
PTPRA-208ENST00000455631 TTLL13PA6NNM8 815 aa25.64■■□□□ 1.7
PTPRA-208ENST00000455631 LRG1P02750 347 aa25.64■■□□□ 1.7
PTPRA-208ENST00000455631 XBP1P17861 261 aa25.64■■□□□ 1.7
PTPRA-208ENST00000455631 FCARP24071 287 aa25.64■■□□□ 1.7
PTPRA-208ENST00000455631 TKTP29401 623 aaKnown RBP25.64■■□□□ 1.7
PTPRA-208ENST00000455631 CDCA2Q69YH5 1023 aaPredicted RBP25.64■■□□□ 1.7
PTPRA-208ENST00000455631 ZNF687Q8N1G0 1237 aa25.64■■□□□ 1.7
PTPRA-208ENST00000455631 ADPGKQ9BRR6 497 aa25.64■■□□□ 1.7
PTPRA-208ENST00000455631 IER2Q9BTL4 223 aa25.64■■□□□ 1.7
PTPRA-208ENST00000455631 ZFP14Q9HCL3 533 aa25.64■■□□□ 1.7
PTPRA-208ENST00000455631 AVENQ9NQS1 362 aaPredicted RBP25.64■■□□□ 1.7
PTPRA-208ENST00000455631 GJB4Q9NTQ9 266 aa25.64■■□□□ 1.7
PTPRA-208ENST00000455631 PCDHA12Q9UN75 941 aa25.64■■□□□ 1.7
PTPRA-208ENST00000455631 GDAQ9Y2T3 454 aa25.64■■□□□ 1.7
PTPRA-208ENST00000455631 A0A087WWV3 80 aa25.63■■□□□ 1.69
PTPRA-208ENST00000455631 TMEM189-UBE2V1I3L0A0 370 aa25.63■■□□□ 1.69
PTPRA-208ENST00000455631 PTPN2P17706 415 aa25.63■■□□□ 1.69
PTPRA-208ENST00000455631 KCNA4P22459 653 aa25.63■■□□□ 1.69
PTPRA-208ENST00000455631 IGFBP6P24592 240 aaPredicted RBP25.63■■□□□ 1.69
PTPRA-208ENST00000455631 CCR3P51677 355 aa25.63■■□□□ 1.69
PTPRA-208ENST00000455631 PRPF4BQ13523 1007 aaKnown RBP25.63■■□□□ 1.69
PTPRA-208ENST00000455631 FAM187BQ17R55 369 aa25.63■■□□□ 1.69
PTPRA-208ENST00000455631 EARS2Q5JPH6 523 aaKnown RBP25.63■■□□□ 1.69
PTPRA-208ENST00000455631 GLRA4Q5JXX5 417 aa25.63■■□□□ 1.69
PTPRA-208ENST00000455631 ANKS3Q6ZW76 656 aa25.63■■□□□ 1.69
PTPRA-208ENST00000455631 FAM3CQ92520 227 aa25.63■■□□□ 1.69
PTPRA-208ENST00000455631 DDX27Q96GQ7 796 aaKnown RBP25.63■■□□□ 1.69
PTPRA-208ENST00000455631 CORO1BQ9BR76 489 aa25.63■■□□□ 1.69
PTPRA-208ENST00000455631 TRMT61BQ9BVS5 477 aaKnown RBP25.63■■□□□ 1.69
PTPRA-208ENST00000455631 FZD8Q9H461 694 aa25.63■■□□□ 1.69
PTPRA-208ENST00000455631 BACE2Q9Y5Z0 518 aa25.63■■□□□ 1.69
PTPRA-208ENST00000455631 FAM205CA6NFA0 338 aa25.62■■□□□ 1.69
PTPRA-208ENST00000455631 I3L4J1 428 aa25.62■■□□□ 1.69
PTPRA-208ENST00000455631 PRRG1O14668 218 aa25.62■■□□□ 1.69
PTPRA-208ENST00000455631 RETP07949 1114 aa25.62■■□□□ 1.69
PTPRA-208ENST00000455631 LIG1P18858 919 aa25.62■■□□□ 1.69
PTPRA-208ENST00000455631 CLCNKBP51801 687 aa25.62■■□□□ 1.69
PTPRA-208ENST00000455631 FAM78AQ5JUQ0 283 aa25.62■■□□□ 1.69
PTPRA-208ENST00000455631 LMAN1LQ9HAT1 526 aa25.62■■□□□ 1.69
PTPRA-208ENST00000455631 SEMA4GQ9NTN9 838 aa25.62■■□□□ 1.69
PTPRA-208ENST00000455631 LRP3O75074 770 aa25.61■■□□□ 1.69
PTPRA-208ENST00000455631 ELF1P32519 619 aa25.61■■□□□ 1.69
PTPRA-208ENST00000455631 ROR1Q01973 937 aa25.61■■□□□ 1.69
PTPRA-208ENST00000455631 MAPK6Q16659 721 aa25.61■■□□□ 1.69
PTPRA-208ENST00000455631 PRSS36Q5K4E3 855 aa25.61■■□□□ 1.69
PTPRA-208ENST00000455631 IRF7Q92985 503 aa25.61■■□□□ 1.69
PTPRA-208ENST00000455631 TCEAL4Q96EI5 215 aa25.61■■□□□ 1.69
PTPRA-208ENST00000455631 C2orf40Q9H1Z8 148 aa25.61■■□□□ 1.69
PTPRA-208ENST00000455631 ZSWIM6Q9HCJ5 1215 aa25.61■■□□□ 1.69
PTPRA-208ENST00000455631 USP20Q9Y2K6 914 aa25.61■■□□□ 1.69
PTPRA-208ENST00000455631 CYP46A1Q9Y6A2 500 aa25.61■■□□□ 1.69
PTPRA-208ENST00000455631 PIAS3Q9Y6X2 628 aa25.61■■□□□ 1.69
PTPRA-208ENST00000455631 F5P12259 2224 aa25.6■■□□□ 1.69
PTPRA-208ENST00000455631 RALGAPA1Q6GYQ0 2036 aa25.6■■□□□ 1.69
PTPRA-208ENST00000455631 ARHGEF37A1IGU5 675 aa25.6■■□□□ 1.69
PTPRA-208ENST00000455631 TRAPPC3O43617 180 aa25.6■■□□□ 1.69
PTPRA-208ENST00000455631 CDKL5O76039 1030 aa25.6■■□□□ 1.69
PTPRA-208ENST00000455631 PRKCBP05771 671 aa25.6■■□□□ 1.69
PTPRA-208ENST00000455631 RBM25P49756 843 aaKnown RBP25.6■■□□□ 1.69
PTPRA-208ENST00000455631 SATB1Q01826 763 aa25.6■■□□□ 1.69
PTPRA-208ENST00000455631 SIM2Q14190 667 aaPredicted RBP25.6■■□□□ 1.69
PTPRA-208ENST00000455631 CALCRLQ16602 461 aa25.6■■□□□ 1.69
PTPRA-208ENST00000455631 MAMSTRQ6ZN01 415 aa25.6■■□□□ 1.69
PTPRA-208ENST00000455631 PRR23CQ6ZRP0 262 aa25.6■■□□□ 1.69
PTPRA-208ENST00000455631 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.6■■□□□ 1.69
PTPRA-208ENST00000455631 MCPH1Q8NEM0 835 aa25.6■■□□□ 1.69
PTPRA-208ENST00000455631 TTC12Q9H892 705 aaPredicted RBP25.6■■□□□ 1.69
PTPRA-208ENST00000455631 GDI1P31150 447 aa25.59■■□□□ 1.69
PTPRA-208ENST00000455631 BRCC3P46736 316 aa25.59■■□□□ 1.69
PTPRA-208ENST00000455631 PDZD4Q76G19 769 aaPredicted RBP25.59■■□□□ 1.69
PTPRA-208ENST00000455631 ZNF461Q8TAF7 563 aa25.59■■□□□ 1.69
PTPRA-208ENST00000455631 ASB16Q96NS5 453 aa25.59■■□□□ 1.69
PTPRA-208ENST00000455631 GOLGA2P5Q9HBQ8 144 aa25.59■■□□□ 1.69
PTPRA-208ENST00000455631 ZNF334Q9HCZ1 680 aaPredicted RBP25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms