RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 CARNMT1Q8N4J0 409 aa10.27□□□□□ -0.77
LINC01940-201ENST00000455228 TGFBRAP1Q8WUH2 860 aa10.27□□□□□ -0.77
LINC01940-201ENST00000455228 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.27□□□□□ -0.77
LINC01940-201ENST00000455228 ANKS1AQ92625 1134 aa10.27□□□□□ -0.77
LINC01940-201ENST00000455228 RAD54LQ92698 747 aa10.27□□□□□ -0.77
LINC01940-201ENST00000455228 ANKRD36BP1Q96IX9 119 aa10.27□□□□□ -0.77
LINC01940-201ENST00000455228 OLFM3Q96PB7 478 aa10.27□□□□□ -0.77
LINC01940-201ENST00000455228 FAM129AQ9BZQ8 928 aa10.27□□□□□ -0.77
LINC01940-201ENST00000455228 ISCUQ9H1K1 167 aa10.27□□□□□ -0.77
LINC01940-201ENST00000455228 LARSQ9P2J5 1176 aaKnown RBP10.27□□□□□ -0.77
LINC01940-201ENST00000455228 A0A0B4J203 849 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 SMIM31A0A1B0GVY4 71 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 TLR2O60603 784 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 FKBP9O95302 570 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 KRT18P05783 430 aaKnown RBP10.26□□□□□ -0.77
LINC01940-201ENST00000455228 TKTP29401 623 aaKnown RBP10.26□□□□□ -0.77
LINC01940-201ENST00000455228 WDR45BQ5MNZ6 344 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 FIP1L1Q6UN15 594 aaKnown RBP10.26□□□□□ -0.77
LINC01940-201ENST00000455228 PDCD7Q8N8D1 485 aaKnown RBP10.26□□□□□ -0.77
LINC01940-201ENST00000455228 LSMEM1Q8N8F7 131 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 PLEKHO2Q8TD55 490 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 ZNF317Q96PQ6 595 aaPredicted RBP10.26□□□□□ -0.77
LINC01940-201ENST00000455228 PSKH2Q96QS6 385 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 PIGSQ96S52 555 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 GOLPH3Q9H4A6 298 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 TRPC7Q9HCX4 862 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 PLCB1Q9NQ66 1216 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 ARHGEF38Q9NXL2 777 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 CHMP2BQ9UQN3 213 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 LZTS1Q9Y250 596 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 M0QX08 132 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 KRIT1O00522 736 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 CDK4P11802 303 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 TBXAS1P24557 533 aaPredicted RBP10.26□□□□□ -0.77
LINC01940-201ENST00000455228 TNNI2P48788 182 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 MXI1P50539 228 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 THOP1P52888 689 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 ERVK-9P63128 1117 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 BIRC3Q13489 604 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 GKAP1Q5VSY0 366 aaPredicted RBP10.26□□□□□ -0.77
LINC01940-201ENST00000455228 SLC30A10Q6XR72 485 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 STK32AQ8WU08 396 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 NAT14Q8WUY8 206 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 ANKRD49Q8WVL7 239 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 PEX13Q92968 403 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 PNMA5Q96PV4 448 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 SPZ1Q9BXG8 430 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 MAP3K20Q9NYL2 800 aaKnown RBP10.26□□□□□ -0.77
LINC01940-201ENST00000455228 NOVA2Q9UNW9 492 aaKnown RBP10.26□□□□□ -0.77
LINC01940-201ENST00000455228 AGAP1Q9UPQ3 857 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 CACNA1SQ13698 1873 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 COL6A2P12110 1019 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 RPS8P62241 208 aaKnown RBP10.26□□□□□ -0.77
LINC01940-201ENST00000455228 IRF5Q13568 498 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 GRM2Q14416 872 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 KRT71Q3SY84 523 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 OR7G1Q8NGA0 311 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 ANGPTL6Q8NI99 470 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 SH3RF3Q8TEJ3 882 aaPredicted RBP10.26□□□□□ -0.77
LINC01940-201ENST00000455228 CYP39A1Q9NYL5 469 aa10.26□□□□□ -0.77
LINC01940-201ENST00000455228 SLIT2O94813 1529 aa10.25□□□□□ -0.77
LINC01940-201ENST00000455228 PGRMC1O00264 195 aaKnown RBP10.25□□□□□ -0.77
LINC01940-201ENST00000455228 FBP2O00757 339 aa10.25□□□□□ -0.77
LINC01940-201ENST00000455228 BACH1O14867 736 aa10.25□□□□□ -0.77
LINC01940-201ENST00000455228 PEX11AO75192 247 aa10.25□□□□□ -0.77
LINC01940-201ENST00000455228 UPP2O95045 317 aa10.25□□□□□ -0.77
LINC01940-201ENST00000455228 TDP2O95551 362 aa10.25□□□□□ -0.77
LINC01940-201ENST00000455228 MSH2P43246 934 aa10.25□□□□□ -0.77
LINC01940-201ENST00000455228 CDK7P50613 346 aa10.25□□□□□ -0.77
LINC01940-201ENST00000455228 COASYQ13057 564 aa10.25□□□□□ -0.77
LINC01940-201ENST00000455228 INSCQ1MX18 579 aa10.25□□□□□ -0.77
LINC01940-201ENST00000455228 HERC4Q5GLZ8 1057 aaPredicted RBP10.25□□□□□ -0.77
LINC01940-201ENST00000455228 BEND5Q7L4P6 421 aa10.25□□□□□ -0.77
LINC01940-201ENST00000455228 PEX26Q7Z412 305 aa10.25□□□□□ -0.77
LINC01940-201ENST00000455228 TREML1Q86YW5 311 aa10.25□□□□□ -0.77
LINC01940-201ENST00000455228 MAPKAPK5Q8IW41 473 aa10.25□□□□□ -0.77
LINC01940-201ENST00000455228 HCAR2Q8TDS4 363 aa10.25□□□□□ -0.77
LINC01940-201ENST00000455228 PBKQ96KB5 322 aa10.25□□□□□ -0.77
LINC01940-201ENST00000455228 UROC1Q96N76 676 aa10.25□□□□□ -0.77
LINC01940-201ENST00000455228 DDX47Q9H0S4 455 aaKnown RBP10.25□□□□□ -0.77
LINC01940-201ENST00000455228 BTBD7Q9P203 1132 aa10.25□□□□□ -0.77
LINC01940-201ENST00000455228 FBXL5Q9UKA1 691 aa10.25□□□□□ -0.77
LINC01940-201ENST00000455228 SCAF8Q9UPN6 1271 aaKnown RBP10.25□□□□□ -0.77
LINC01940-201ENST00000455228 PSME4Q14997 1843 aa10.25□□□□□ -0.77
LINC01940-201ENST00000455228 KDM4FA0A1W2PPD8 638 aa10.25□□□□□ -0.77
LINC01940-201ENST00000455228 TMEM114B3SHH9 223 aa10.25□□□□□ -0.77
LINC01940-201ENST00000455228 BHMG1C9JSJ3 638 aaPredicted RBP10.25□□□□□ -0.77
LINC01940-201ENST00000455228 AP1G1O43747 822 aa10.25□□□□□ -0.77
LINC01940-201ENST00000455228 NOL4O94818 638 aa10.25□□□□□ -0.77
LINC01940-201ENST00000455228 SERPINB6P35237 376 aa10.25□□□□□ -0.77
LINC01940-201ENST00000455228 CACNA2D1P54289 1103 aa10.25□□□□□ -0.77
LINC01940-201ENST00000455228 ZCWPW2Q504Y3 356 aa10.25□□□□□ -0.77
LINC01940-201ENST00000455228 BTBD8Q5XKL5 378 aa10.25□□□□□ -0.77
LINC01940-201ENST00000455228 PHLDB3Q6NSJ2 640 aa10.25□□□□□ -0.77
LINC01940-201ENST00000455228 FAM117BQ6P1L5 589 aa10.25□□□□□ -0.77
LINC01940-201ENST00000455228 ATL1Q8WXF7 558 aa10.25□□□□□ -0.77
LINC01940-201ENST00000455228 CEP295NLQ96MC4 621 aa10.25□□□□□ -0.77
LINC01940-201ENST00000455228 TMEM237Q96Q45 408 aa10.25□□□□□ -0.77
LINC01940-201ENST00000455228 PPP1R10Q96QC0 940 aaKnown RBP10.25□□□□□ -0.77
LINC01940-201ENST00000455228 EYA3Q99504 573 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms