RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 PARM1Q6UWI2 310 aa17.63■□□□□ 0.41
GPC1-206ENST00000455111 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.63■□□□□ 0.41
GPC1-206ENST00000455111 CCDC105Q8IYK2 499 aa17.63■□□□□ 0.41
GPC1-206ENST00000455111 GPR152Q8TDT2 470 aa17.63■□□□□ 0.41
GPC1-206ENST00000455111 C18orf25Q96B23 403 aaPredicted RBP17.63■□□□□ 0.41
GPC1-206ENST00000455111 IFT74Q96LB3 600 aa17.63■□□□□ 0.41
GPC1-206ENST00000455111 PIDD1Q9HB75 910 aa17.63■□□□□ 0.41
GPC1-206ENST00000455111 DLGAP2Q9P1A6 1054 aa17.63■□□□□ 0.41
GPC1-206ENST00000455111 CA14Q9ULX7 337 aa17.63■□□□□ 0.41
GPC1-206ENST00000455111 PATJQ8NI35 1801 aa17.63■□□□□ 0.41
GPC1-206ENST00000455111 NPHP3-ACAD11A0A0J9YXS1 232 aa17.62■□□□□ 0.41
GPC1-206ENST00000455111 CCDC169A6NNP5 214 aa17.62■□□□□ 0.41
GPC1-206ENST00000455111 SLC16A4O15374 487 aa17.62■□□□□ 0.41
GPC1-206ENST00000455111 TBC1D4O60343 1298 aa17.62■□□□□ 0.41
GPC1-206ENST00000455111 SRFP11831 508 aa17.62■□□□□ 0.41
GPC1-206ENST00000455111 RAD51AP2Q09MP3 1159 aa17.62■□□□□ 0.41
GPC1-206ENST00000455111 TMEM132AQ24JP5 1023 aa17.62■□□□□ 0.41
GPC1-206ENST00000455111 SLC7A14Q8TBB6 771 aa17.62■□□□□ 0.41
GPC1-206ENST00000455111 SNX27Q96L92 541 aa17.62■□□□□ 0.41
GPC1-206ENST00000455111 PLIN2Q99541 437 aa17.62■□□□□ 0.41
GPC1-206ENST00000455111 MFSD1Q9H3U5 465 aa17.62■□□□□ 0.41
GPC1-206ENST00000455111 DNMT3BQ9UBC3 853 aaKnown RBP17.62■□□□□ 0.41
GPC1-206ENST00000455111 WNT16Q9UBV4 365 aa17.62■□□□□ 0.41
GPC1-206ENST00000455111 DPP7Q9UHL4 492 aa17.62■□□□□ 0.41
GPC1-206ENST00000455111 CDY1Q9Y6F8 540 aa17.62■□□□□ 0.41
GPC1-206ENST00000455111 FANCMQ8IYD8 2048 aa17.62■□□□□ 0.41
GPC1-206ENST00000455111 TSC2P49815 1807 aa17.61■□□□□ 0.41
GPC1-206ENST00000455111 B3GAT3O94766 335 aa17.61■□□□□ 0.41
GPC1-206ENST00000455111 FSHRP23945 695 aa17.61■□□□□ 0.41
GPC1-206ENST00000455111 SLC12A3P55017 1021 aa17.61■□□□□ 0.41
GPC1-206ENST00000455111 CACNB1Q02641 598 aaPredicted RBP17.61■□□□□ 0.41
GPC1-206ENST00000455111 CREMQ03060 361 aa17.61■□□□□ 0.41
GPC1-206ENST00000455111 GNL2Q13823 731 aaKnown RBP17.61■□□□□ 0.41
GPC1-206ENST00000455111 ZNF568Q3ZCX4 644 aa17.61■□□□□ 0.41
GPC1-206ENST00000455111 ARSHQ5FYA8 562 aa17.61■□□□□ 0.41
GPC1-206ENST00000455111 AXDND1Q5T1B0 1012 aaPredicted RBP17.61■□□□□ 0.41
GPC1-206ENST00000455111 DCLRE1AQ6PJP8 1040 aa17.61■□□□□ 0.41
GPC1-206ENST00000455111 FRMD5Q7Z6J6 570 aa17.61■□□□□ 0.41
GPC1-206ENST00000455111 TMEM161BQ8NDZ6 487 aa17.61■□□□□ 0.41
GPC1-206ENST00000455111 STAMQ92783 540 aa17.61■□□□□ 0.41
GPC1-206ENST00000455111 TMX3Q96JJ7 454 aa17.61■□□□□ 0.41
GPC1-206ENST00000455111 NTPCRQ9BSD7 190 aaKnown RBP17.61■□□□□ 0.41
GPC1-206ENST00000455111 DNM3Q9UQ16 869 aa17.61■□□□□ 0.41
GPC1-206ENST00000455111 MIA3Q5JRA6 1907 aa17.6■□□□□ 0.41
GPC1-206ENST00000455111 PRR23AA6NEV1 266 aa17.6■□□□□ 0.41
GPC1-206ENST00000455111 EIF5BO60841 1220 aaKnown RBP17.6■□□□□ 0.41
GPC1-206ENST00000455111 LRRN2O75325 713 aa17.6■□□□□ 0.41
GPC1-206ENST00000455111 GLULP15104 373 aa17.6■□□□□ 0.41
GPC1-206ENST00000455111 KCNE1P15382 129 aa17.6■□□□□ 0.41
GPC1-206ENST00000455111 GUCY2CP25092 1073 aa17.6■□□□□ 0.41
GPC1-206ENST00000455111 HOXA9P31269 272 aa17.6■□□□□ 0.41
GPC1-206ENST00000455111 GRIN1Q05586 938 aa17.6■□□□□ 0.41
GPC1-206ENST00000455111 SLC5A9Q2M3M2 681 aa17.6■□□□□ 0.41
GPC1-206ENST00000455111 SLC10A6Q3KNW5 377 aa17.6■□□□□ 0.41
GPC1-206ENST00000455111 TMEM119Q4V9L6 283 aa17.6■□□□□ 0.41
GPC1-206ENST00000455111 PPM1LQ5SGD2 360 aa17.6■□□□□ 0.41
GPC1-206ENST00000455111 KRT79Q5XKE5 535 aa17.6■□□□□ 0.41
GPC1-206ENST00000455111 DTHD1Q6ZMT9 781 aa17.6■□□□□ 0.41
GPC1-206ENST00000455111 DTWD2Q8NBA8 298 aa17.6■□□□□ 0.41
GPC1-206ENST00000455111 FGF13Q92913 245 aa17.6■□□□□ 0.41
GPC1-206ENST00000455111 MRPL4Q9BYD3 311 aaKnown RBP17.6■□□□□ 0.41
GPC1-206ENST00000455111 KMT5AQ9NQR1 393 aa17.6■□□□□ 0.41
GPC1-206ENST00000455111 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.6■□□□□ 0.41
GPC1-206ENST00000455111 CNTN3Q9P232 1028 aa17.6■□□□□ 0.41
GPC1-206ENST00000455111 FBXL21Q9UKT6 434 aa17.6■□□□□ 0.41
GPC1-206ENST00000455111 BACE2Q9Y5Z0 518 aa17.6■□□□□ 0.41
GPC1-206ENST00000455111 ZFHX2Q9C0A1 2572 aaPredicted RBP17.59■□□□□ 0.41
GPC1-206ENST00000455111 WDR27A2RRH5 827 aa17.59■□□□□ 0.41
GPC1-206ENST00000455111 SHISA7A6NL88 538 aa17.59■□□□□ 0.41
GPC1-206ENST00000455111 LAD1O00515 517 aa17.59■□□□□ 0.41
GPC1-206ENST00000455111 POU2F2P09086 479 aa17.59■□□□□ 0.41
GPC1-206ENST00000455111 HNRNPA1P09651 372 aaKnown RBP eCLIP17.59■□□□□ 0.41
GPC1-206ENST00000455111 MAPTP10636 758 aaKnown RBP17.59■□□□□ 0.41
GPC1-206ENST00000455111 MCF2P10911 925 aa17.59■□□□□ 0.41
GPC1-206ENST00000455111 GJB2P29033 226 aa17.59■□□□□ 0.41
GPC1-206ENST00000455111 GPC5P78333 572 aa17.59■□□□□ 0.41
GPC1-206ENST00000455111 ROR1Q01973 937 aa17.59■□□□□ 0.41
GPC1-206ENST00000455111 ELAVL2Q12926 359 aaKnown RBP17.59■□□□□ 0.41
GPC1-206ENST00000455111 MRPL58Q14197 206 aaKnown RBP17.59■□□□□ 0.41
GPC1-206ENST00000455111 SYT2Q8N9I0 419 aaPredicted RBP17.59■□□□□ 0.41
GPC1-206ENST00000455111 TBC1D17Q9HA65 648 aa17.59■□□□□ 0.41
GPC1-206ENST00000455111 SLC2A4RGQ9NR83 387 aa17.59■□□□□ 0.41
GPC1-206ENST00000455111 CDH7Q9ULB5 785 aa17.59■□□□□ 0.41
GPC1-206ENST00000455111 DCHS1Q96JQ0 3298 aa17.58■□□□□ 0.41
GPC1-206ENST00000455111 PODXLO00592 558 aa17.58■□□□□ 0.4
GPC1-206ENST00000455111 ST18O60284 1047 aa17.58■□□□□ 0.4
GPC1-206ENST00000455111 FAM189A1O60320 539 aa17.58■□□□□ 0.4
GPC1-206ENST00000455111 ABLIM3O94929 683 aa17.58■□□□□ 0.4
GPC1-206ENST00000455111 SEC24AO95486 1093 aa17.58■□□□□ 0.4
GPC1-206ENST00000455111 HARSP12081 509 aaKnown RBP17.58■□□□□ 0.4
GPC1-206ENST00000455111 DMP1Q13316 513 aaPredicted RBP17.58■□□□□ 0.4
GPC1-206ENST00000455111 RABEP1Q15276 862 aa17.58■□□□□ 0.4
GPC1-206ENST00000455111 ANGPT1Q15389 498 aa17.58■□□□□ 0.4
GPC1-206ENST00000455111 VARS2Q5ST30 1063 aaKnown RBP17.58■□□□□ 0.4
GPC1-206ENST00000455111 ZBTB41Q5SVQ8 909 aa17.58■□□□□ 0.4
GPC1-206ENST00000455111 SLC8B1Q6J4K2 584 aa17.58■□□□□ 0.4
GPC1-206ENST00000455111 ELMSAN1Q6PJG2 1045 aa17.58■□□□□ 0.4
GPC1-206ENST00000455111 MPZL3Q6UWV2 235 aa17.58■□□□□ 0.4
GPC1-206ENST00000455111 NPAS3Q8IXF0 933 aa17.58■□□□□ 0.4
GPC1-206ENST00000455111 SPIRE2Q8WWL2 714 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms