RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 MKRN4PQ13434 485 aaPredicted RBP14.64□□□□□ -0.07
CLK3-203ENST00000454830 EXOC8Q8IYI6 725 aa14.64□□□□□ -0.07
CLK3-203ENST00000454830 UBL4BQ8N7F7 174 aa14.64□□□□□ -0.07
CLK3-203ENST00000454830 CGRRF1Q99675 332 aa14.64□□□□□ -0.07
CLK3-203ENST00000454830 A0A087WZ62 844 aa14.64□□□□□ -0.07
CLK3-203ENST00000454830 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.64□□□□□ -0.07
CLK3-203ENST00000454830 TMOD1P28289 359 aa14.64□□□□□ -0.07
CLK3-203ENST00000454830 UMODL1Q5DID0 1318 aa14.64□□□□□ -0.07
CLK3-203ENST00000454830 SHCBP1Q8NEM2 672 aa14.64□□□□□ -0.07
CLK3-203ENST00000454830 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.64□□□□□ -0.072e-8■■■□□ 17.6
CLK3-203ENST00000454830 FDXACB1Q9BRP7 624 aaPredicted RBP14.64□□□□□ -0.07
CLK3-203ENST00000454830 NOCTQ9UK39 431 aaKnown RBP14.64□□□□□ -0.07
CLK3-203ENST00000454830 OTOFQ9HC10 1997 aa14.64□□□□□ -0.07
CLK3-203ENST00000454830 OGTO15294 1046 aa14.64□□□□□ -0.07
CLK3-203ENST00000454830 ITGA4P13612 1032 aa14.64□□□□□ -0.07
CLK3-203ENST00000454830 GNA15P30679 374 aa14.64□□□□□ -0.07
CLK3-203ENST00000454830 EEF1DP3Q658K8 133 aa14.64□□□□□ -0.07
CLK3-203ENST00000454830 ENOSF1Q7L5Y1 443 aa14.64□□□□□ -0.07
CLK3-203ENST00000454830 GPR142Q7Z601 462 aa14.64□□□□□ -0.07
CLK3-203ENST00000454830 PARK7Q99497 189 aaKnown RBP14.64□□□□□ -0.07
CLK3-203ENST00000454830 C11orf70Q9BRQ4 267 aa14.64□□□□□ -0.07
CLK3-203ENST00000454830 RAD51CO43502 376 aa14.63□□□□□ -0.07
CLK3-203ENST00000454830 C4BPAP04003 597 aaKnown RBP14.63□□□□□ -0.07
CLK3-203ENST00000454830 GLI1P08151 1106 aa14.63□□□□□ -0.07
CLK3-203ENST00000454830 CD19P15391 556 aa14.63□□□□□ -0.07
CLK3-203ENST00000454830 GCNT1Q02742 428 aa14.63□□□□□ -0.07
CLK3-203ENST00000454830 CUL2Q13617 745 aa14.63□□□□□ -0.07
CLK3-203ENST00000454830 PRAMEF19Q5SWL8 479 aa14.63□□□□□ -0.07
CLK3-203ENST00000454830 ACO2Q99798 780 aaKnown RBP14.63□□□□□ -0.07
CLK3-203ENST00000454830 WDR90Q96KV7 1748 aa14.63□□□□□ -0.07
CLK3-203ENST00000454830 MSCO60682 206 aa14.63□□□□□ -0.07
CLK3-203ENST00000454830 TNNC2P02585 160 aa14.63□□□□□ -0.07
CLK3-203ENST00000454830 COMTP21964 271 aa14.63□□□□□ -0.07
CLK3-203ENST00000454830 GCLCP48506 637 aaPredicted RBP14.63□□□□□ -0.07
CLK3-203ENST00000454830 MYL6P60660 151 aa14.63□□□□□ -0.07
CLK3-203ENST00000454830 ZPBP2Q6X784 338 aa14.63□□□□□ -0.07
CLK3-203ENST00000454830 OR6J1Q8NGC5 347 aa14.63□□□□□ -0.07
CLK3-203ENST00000454830 GTF3C2Q8WUA4 911 aaPredicted RBP14.63□□□□□ -0.07
CLK3-203ENST00000454830 AMACRQ9UHK6 382 aa14.63□□□□□ -0.07
CLK3-203ENST00000454830 ANAPC7Q9UJX3 599 aa14.63□□□□□ -0.07
CLK3-203ENST00000454830 USTQ9Y2C2 406 aa14.63□□□□□ -0.07
CLK3-203ENST00000454830 NUB1Q9Y5A7 615 aa14.63□□□□□ -0.07
CLK3-203ENST00000454830 GOLGA6L10A0A0M3HER8 536 aa14.63□□□□□ -0.07
CLK3-203ENST00000454830 DYNC1LI2O43237 492 aaPredicted RBP14.63□□□□□ -0.07
CLK3-203ENST00000454830 WEE2P0C1S8 567 aa14.63□□□□□ -0.07
CLK3-203ENST00000454830 CARSP49589 748 aaKnown RBP14.63□□□□□ -0.07
CLK3-203ENST00000454830 BPIFB4P59827 614 aa14.63□□□□□ -0.07
CLK3-203ENST00000454830 DUOXA2Q1HG44 320 aa14.63□□□□□ -0.07
CLK3-203ENST00000454830 SKIDA1Q1XH10 827 aa14.63□□□□□ -0.07
CLK3-203ENST00000454830 AADACL2Q6P093 401 aa14.63□□□□□ -0.07
CLK3-203ENST00000454830 LLGL2Q6P1M3 1020 aa14.63□□□□□ -0.07
CLK3-203ENST00000454830 RBBP8NLQ8NC74 664 aaPredicted RBP14.63□□□□□ -0.07
CLK3-203ENST00000454830 CPB2Q96IY4 423 aa14.63□□□□□ -0.07
CLK3-203ENST00000454830 RNPC3Q96LT9 517 aaKnown RBP14.63□□□□□ -0.07
CLK3-203ENST00000454830 SYT11Q9BT88 431 aa14.63□□□□□ -0.07
CLK3-203ENST00000454830 DPH5Q9H2P9 285 aa14.63□□□□□ -0.07
CLK3-203ENST00000454830 RPF1Q9H9Y2 349 aaKnown RBP14.63□□□□□ -0.07
CLK3-203ENST00000454830 NCANO14594 1321 aa14.63□□□□□ -0.07
CLK3-203ENST00000454830 H3BRB1 525 aa14.62□□□□□ -0.07
CLK3-203ENST00000454830 GAS2O43903 313 aaKnown RBP14.62□□□□□ -0.07
CLK3-203ENST00000454830 VNN1O95497 513 aa14.62□□□□□ -0.07
CLK3-203ENST00000454830 MYCNP04198 464 aaPredicted RBP14.62□□□□□ -0.07
CLK3-203ENST00000454830 MAPK4P31152 587 aa14.62□□□□□ -0.07
CLK3-203ENST00000454830 PHKA2P46019 1235 aa14.62□□□□□ -0.07
CLK3-203ENST00000454830 ARHGAP1Q07960 439 aa14.62□□□□□ -0.07
CLK3-203ENST00000454830 CYFIP2Q96F07 1278 aa14.62□□□□□ -0.07
CLK3-203ENST00000454830 MS4A4AQ96JQ5 239 aa14.62□□□□□ -0.07
CLK3-203ENST00000454830 TUT1Q9H6E5 874 aaKnown RBP14.62□□□□□ -0.07
CLK3-203ENST00000454830 APOBEC3GQ9HC16 384 aaKnown RBP14.62□□□□□ -0.07
CLK3-203ENST00000454830 PCDHB2Q9Y5E7 798 aa14.62□□□□□ -0.07
CLK3-203ENST00000454830 WDR81Q562E7 1941 aa14.62□□□□□ -0.07
CLK3-203ENST00000454830 SART1O43290 800 aaKnown RBP14.62□□□□□ -0.07
CLK3-203ENST00000454830 LGR5O75473 907 aa14.62□□□□□ -0.07
CLK3-203ENST00000454830 CST3P01034 146 aaPredicted RBP14.62□□□□□ -0.07
CLK3-203ENST00000454830 CXCL8P10145 99 aa14.62□□□□□ -0.07
CLK3-203ENST00000454830 GZMAP12544 262 aa14.62□□□□□ -0.07
CLK3-203ENST00000454830 SLC26A2P50443 739 aa14.62□□□□□ -0.07
CLK3-203ENST00000454830 PPFIA1Q13136 1202 aa14.62□□□□□ -0.07
CLK3-203ENST00000454830 SEL1L2Q5TEA6 688 aa14.62□□□□□ -0.07
CLK3-203ENST00000454830 BRSK2Q8IWQ3 736 aa14.62□□□□□ -0.07
CLK3-203ENST00000454830 ISCUQ9H1K1 167 aa14.62□□□□□ -0.07
CLK3-203ENST00000454830 MINDY3Q9H8M7 445 aa14.62□□□□□ -0.07
CLK3-203ENST00000454830 ERICH4A6NGS2 130 aa14.62□□□□□ -0.07
CLK3-203ENST00000454830 PMM2O15305 246 aa14.62□□□□□ -0.07
CLK3-203ENST00000454830 ERLIN2O94905 339 aa14.62□□□□□ -0.07
CLK3-203ENST00000454830 MARCKSL1P49006 195 aa14.62□□□□□ -0.07
CLK3-203ENST00000454830 SCARA3Q6AZY7 606 aa14.62□□□□□ -0.07
CLK3-203ENST00000454830 MPZL3Q6UWV2 235 aa14.62□□□□□ -0.07
CLK3-203ENST00000454830 PLEKHH3Q7Z736 793 aa14.62□□□□□ -0.07
CLK3-203ENST00000454830 CPNE8Q86YQ8 564 aa14.62□□□□□ -0.07
CLK3-203ENST00000454830 TMEM174Q8WUU8 243 aa14.62□□□□□ -0.07
CLK3-203ENST00000454830 RIN2Q8WYP3 895 aaPredicted RBP14.62□□□□□ -0.07
CLK3-203ENST00000454830 KRT35Q92764 455 aa14.62□□□□□ -0.07
CLK3-203ENST00000454830 ANKRD36BP1Q96IX9 119 aa14.62□□□□□ -0.07
CLK3-203ENST00000454830 NENFQ9UMX5 172 aa14.62□□□□□ -0.07
CLK3-203ENST00000454830 H3BQF6 201 aa14.61□□□□□ -0.07
CLK3-203ENST00000454830 STRNO43815 780 aa14.61□□□□□ -0.07
CLK3-203ENST00000454830 ZC3H11AO75152 810 aaKnown RBP eCLIP14.61□□□□□ -0.07
CLK3-203ENST00000454830 CLTAP09496 248 aa14.61□□□□□ -0.07
CLK3-203ENST00000454830 FGFR4P22455 802 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms