RNA–Protein interactions for RNA: ENST00000454822.5

RPE-216, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 2,130 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-216ENST00000454822 GPR142Q7Z601 462 aa9.5□□□□□ -0.89
RPE-216ENST00000454822 DPP9Q86TI2 863 aa9.5□□□□□ -0.89
RPE-216ENST00000454822 RASGEF1CQ8N431 466 aa9.5□□□□□ -0.89
RPE-216ENST00000454822 MSL3Q8N5Y2 521 aaKnown RBP9.5□□□□□ -0.89
RPE-216ENST00000454822 AFG1LQ8WV93 481 aa9.5□□□□□ -0.89
RPE-216ENST00000454822 KRT12Q99456 494 aa9.5□□□□□ -0.89
RPE-216ENST00000454822 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.5□□□□□ -0.89
RPE-216ENST00000454822 RRAGCQ9HB90 399 aa9.5□□□□□ -0.89
RPE-216ENST00000454822 PTPRHQ9HD43 1115 aa9.5□□□□□ -0.89
RPE-216ENST00000454822 STIM2Q9P246 746 aa9.5□□□□□ -0.89
RPE-216ENST00000454822 CHORDC1Q9UHD1 332 aaPredicted RBP9.5□□□□□ -0.89
RPE-216ENST00000454822 ALG6Q9Y672 507 aa9.5□□□□□ -0.89
RPE-216ENST00000454822 PLXNB2O15031 1838 aa9.49□□□□□ -0.89
RPE-216ENST00000454822 EVPLQ92817 2033 aa9.49□□□□□ -0.89
RPE-216ENST00000454822 INO80B-WBP1J3KQ70 363 aa9.49□□□□□ -0.89
RPE-216ENST00000454822 PGRMC1O00264 195 aaKnown RBP9.49□□□□□ -0.89
RPE-216ENST00000454822 CYP1A2P05177 515 aa9.49□□□□□ -0.89
RPE-216ENST00000454822 ACO1P21399 889 aaKnown RBP9.49□□□□□ -0.89
RPE-216ENST00000454822 PROZP22891 400 aa9.49□□□□□ -0.89
RPE-216ENST00000454822 AP3M2P53677 418 aa9.49□□□□□ -0.89
RPE-216ENST00000454822 BPIFB4P59827 614 aa9.49□□□□□ -0.89
RPE-216ENST00000454822 PTENP60484 403 aa9.49□□□□□ -0.89
RPE-216ENST00000454822 IGBP1P78318 339 aa9.49□□□□□ -0.89
RPE-216ENST00000454822 GRM1Q13255 1194 aa9.49□□□□□ -0.89
RPE-216ENST00000454822 CUL2Q13617 745 aa9.49□□□□□ -0.89
RPE-216ENST00000454822 NCOA4Q13772 614 aa9.49□□□□□ -0.89
RPE-216ENST00000454822 CLEC16AQ2KHT3 1053 aa9.49□□□□□ -0.89
RPE-216ENST00000454822 GSPT2Q8IYD1 628 aaKnown RBP9.49□□□□□ -0.89
RPE-216ENST00000454822 PPTC7Q8NI37 304 aa9.49□□□□□ -0.89
RPE-216ENST00000454822 EMID1Q96A84 441 aaPredicted RBP9.49□□□□□ -0.89
RPE-216ENST00000454822 INO80BQ9C086 356 aaPredicted RBP9.49□□□□□ -0.89
RPE-216ENST00000454822 CPSF3Q9UKF6 684 aaKnown RBP9.49□□□□□ -0.89
RPE-216ENST00000454822 NUB1Q9Y5A7 615 aa9.49□□□□□ -0.89
RPE-216ENST00000454822 PCDHB2Q9Y5E7 798 aa9.49□□□□□ -0.89
RPE-216ENST00000454822 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.49□□□□□ -0.89
RPE-216ENST00000454822 MAGEB2O15479 319 aa9.49□□□□□ -0.89
RPE-216ENST00000454822 B4GALT5O43286 388 aa9.49□□□□□ -0.89
RPE-216ENST00000454822 ATMINO43313 823 aaPredicted RBP9.49□□□□□ -0.89
RPE-216ENST00000454822 PPFIA4O75335 1185 aa9.49□□□□□ -0.89
RPE-216ENST00000454822 MTA2O94776 668 aa9.49□□□□□ -0.89
RPE-216ENST00000454822 CST3P01034 146 aaPredicted RBP9.49□□□□□ -0.89
RPE-216ENST00000454822 GLI1P08151 1106 aa9.49□□□□□ -0.89
RPE-216ENST00000454822 CLTAP09496 248 aa9.49□□□□□ -0.89
RPE-216ENST00000454822 TNNC1P63316 161 aa9.49□□□□□ -0.89
RPE-216ENST00000454822 MBTD1Q05BQ5 628 aa9.49□□□□□ -0.89
RPE-216ENST00000454822 GRB14Q14449 540 aa9.49□□□□□ -0.89
RPE-216ENST00000454822 ATF7IP2Q5U623 682 aa9.49□□□□□ -0.89
RPE-216ENST00000454822 C11orf63Q6NUN7 778 aa9.49□□□□□ -0.89
RPE-216ENST00000454822 MPZL3Q6UWV2 235 aa9.49□□□□□ -0.89
RPE-216ENST00000454822 PLEKHH3Q7Z736 793 aa9.49□□□□□ -0.89
RPE-216ENST00000454822 WDR49Q8IV35 697 aa9.49□□□□□ -0.89
RPE-216ENST00000454822 KLHL7Q8IXQ5 586 aa9.49□□□□□ -0.89
RPE-216ENST00000454822 FAM212AQ96EL1 285 aa9.49□□□□□ -0.89
RPE-216ENST00000454822 PARK7Q99497 189 aaKnown RBP9.49□□□□□ -0.89
RPE-216ENST00000454822 AP1M1Q9BXS5 423 aa9.49□□□□□ -0.89
RPE-216ENST00000454822 MINDY3Q9H8M7 445 aa9.49□□□□□ -0.89
RPE-216ENST00000454822 NOC2LQ9Y3T9 749 aaKnown RBP9.49□□□□□ -0.89
RPE-216ENST00000454822 PCDHB4Q9Y5E5 795 aa9.49□□□□□ -0.89
RPE-216ENST00000454822 UMODL1Q5DID0 1318 aa9.48□□□□□ -0.89
RPE-216ENST00000454822 TMEM110-MUSTN1A8MSY1 372 aa9.48□□□□□ -0.89
RPE-216ENST00000454822 UNGP13051 313 aaPredicted RBP9.48□□□□□ -0.89
RPE-216ENST00000454822 SMPD1P17405 629 aa9.48□□□□□ -0.89
RPE-216ENST00000454822 TNNT3P45378 269 aaPredicted RBP9.48□□□□□ -0.89
RPE-216ENST00000454822 NOP14P78316 857 aaKnown RBP9.48□□□□□ -0.89
RPE-216ENST00000454822 MESDQ14696 234 aa9.48□□□□□ -0.89
RPE-216ENST00000454822 SURF1Q15526 300 aa9.48□□□□□ -0.89
RPE-216ENST00000454822 DUOXA2Q1HG44 320 aa9.48□□□□□ -0.89
RPE-216ENST00000454822 EEF1DP3Q658K8 133 aa9.48□□□□□ -0.89
RPE-216ENST00000454822 ZNF677Q86XU0 584 aa9.48□□□□□ -0.89
RPE-216ENST00000454822 THNSL1Q8IYQ7 743 aa9.48□□□□□ -0.89
RPE-216ENST00000454822 AENQ8WTP8 325 aaKnown RBP9.48□□□□□ -0.89
RPE-216ENST00000454822 ZNF653Q96CK0 615 aa9.48□□□□□ -0.89
RPE-216ENST00000454822 MAML3Q96JK9 1138 aa9.48□□□□□ -0.89
RPE-216ENST00000454822 GDAP1L1Q96MZ0 367 aa9.48□□□□□ -0.89
RPE-216ENST00000454822 RPS6KC1Q96S38 1066 aa9.48□□□□□ -0.89
RPE-216ENST00000454822 C16orf70Q9BSU1 422 aa9.48□□□□□ -0.89
RPE-216ENST00000454822 NUP85Q9BW27 656 aa9.48□□□□□ -0.89
RPE-216ENST00000454822 GDF3Q9NR23 364 aa9.48□□□□□ -0.89
RPE-216ENST00000454822 GTF3C4Q9UKN8 822 aa9.48□□□□□ -0.89
RPE-216ENST00000454822 TTC7AQ9ULT0 858 aaPredicted RBP9.48□□□□□ -0.89
RPE-216ENST00000454822 KRIT1O00522 736 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 RAD51CO43502 376 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 HEXIM1O94992 359 aaKnown RBP9.47□□□□□ -0.89
RPE-216ENST00000454822 IQCF3P0C7M6 154 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 ZNF286BP0CG31 522 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 COMTP21964 271 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 TBXAS1P24557 533 aaPredicted RBP9.47□□□□□ -0.89
RPE-216ENST00000454822 TNFRSF8P28908 595 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 OAS2P29728 719 aaKnown RBP9.47□□□□□ -0.89
RPE-216ENST00000454822 MAPK4P31152 587 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 POU5F1BQ06416 359 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 FAM110CQ1W6H9 321 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 TMEM132AQ24JP5 1023 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 ZNF568Q3ZCX4 644 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 DUSP28Q4G0W2 176 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 DCAF12L1Q5VU92 463 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 TMEM270Q6UE05 265 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 CDR2LQ86X02 465 aaPredicted RBP9.47□□□□□ -0.89
RPE-216ENST00000454822 IFT20Q8IY31 132 aa9.47□□□□□ -0.89
RPE-216ENST00000454822 LINC01465Q8N7H1 131 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms