RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 CITO14578 2027 aa6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 PDCD11Q14690 1871 aaKnown RBP6.62□□□□□ -1.35
HLA-DPA3-207ENST00000454398 DCDC2BA2VCK2 349 aa6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 CARNS1A5YM72 827 aa6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 LAMTOR5O43504 91 aa6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 PFKFB2O60825 505 aa6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 RHOP08100 348 aa6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 SOX9P48436 509 aa6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 STARD6P59095 220 aa6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 ROR1Q01973 937 aa6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 CREMQ03060 361 aa6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 DMWDQ09019 674 aa6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 MTAPQ13126 283 aa6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 ECM1Q16610 540 aa6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 ME3Q16798 604 aa6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 SEZ6Q53EL9 994 aa6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 SLC44A4Q53GD3 710 aa6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 TANGO2Q6ICL3 276 aa6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 CATSPER3Q86XQ3 398 aa6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 ZBTB8OSQ8IWT0 167 aa6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 SLFN12Q8IYM2 578 aa6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 ZNF687Q8N1G0 1237 aa6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 NSUN7Q8NE18 718 aaKnown RBP6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 DEPTORQ8TB45 409 aa6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 GTF3C6Q969F1 213 aa6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 C18orf25Q96B23 403 aaPredicted RBP6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 CORO1BQ9BR76 489 aa6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 DDX23Q9BUQ8 820 aaKnown RBP6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 BCO2Q9BYV7 579 aa6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 RBM12Q9NTZ6 932 aaKnown RBP6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 ANKEF1Q9NU02 776 aa6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 C2orf42Q9NWW7 574 aa6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 MTRRQ9UBK8 725 aa6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 STK39Q9UEW8 545 aa6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 TUBGCP4Q9UGJ1 667 aa6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 RALYQ9UKM9 306 aaKnown RBP6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 USP18Q9UMW8 372 aa6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 PCDHA12Q9UN75 941 aa6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 SSX2IPQ9Y2D8 614 aa6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 MRPS23Q9Y3D9 190 aaKnown RBP6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 PPME1Q9Y570 386 aa6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.61□□□□□ -1.35
HLA-DPA3-207ENST00000454398 ANK1P16157 1881 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 KIF26AQ9ULI4 1882 aaPredicted RBP6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 LAMA1P25391 3075 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 ASPMQ8IZT6 3477 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 WDR27A2RRH5 827 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 ARHGEF35A5YM69 484 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 PP2D1A8MPX8 630 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 PRRG1O14668 218 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 N4BP3O15049 544 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 ASAP2O43150 1006 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 XYLBO75191 536 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 LYPLA2O95372 231 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 BAG4O95429 457 aaKnown RBP6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 SEC24AO95486 1093 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 THP07101 528 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 HNRNPA1P09651 372 aaKnown RBP eCLIP6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 OR4Q2P0C623 313 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 TDGF1P13385 188 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 XBP1P17861 261 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 FGFR3P22607 806 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 VIPR2P41587 438 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 GUCY2FP51841 1108 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 SPAG1Q07617 926 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 NCBP1Q09161 790 aaKnown RBP6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 PUM1Q14671 1186 aaKnown RBP eCLIP6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 MAPK6Q16659 721 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 ZNF568Q3ZCX4 644 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 FAM78AQ5JUQ0 283 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 VARS2Q5ST30 1063 aaKnown RBP6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 STXBP5Q5T5C0 1151 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 NT5DC1Q5TFE4 455 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 ATF7IP2Q5U623 682 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 HEATR6Q6AI08 1181 aaKnown RBP6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 PADI6Q6TGC4 694 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 PPP4R3CPQ6ZMV5 832 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 PRR23BQ6ZRT6 265 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 Q6ZS52 159 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 MTSS1LQ765P7 747 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 HS6ST3Q8IZP7 471 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 TTC9BQ8N6N2 239 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 TTC8Q8TAM2 541 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 RSPRY1Q96DX4 576 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 ZSWIM3Q96MP5 696 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 ZMAT2Q96NC0 199 aaKnown RBP6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 PGLYRP2Q96PD5 576 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 PPP1R10Q96QC0 940 aaKnown RBP6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 MTMR9Q96QG7 549 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 NFKBIZQ9BYH8 718 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 RHOBTB2Q9BYZ6 727 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 CDT1Q9H211 546 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 FZD8Q9H461 694 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 BRMS1Q9HCU9 246 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 PRMT8Q9NR22 394 aaPredicted RBP6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 PRMT7Q9NVM4 692 aaPredicted RBP6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 DLL3Q9NYJ7 618 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 ANKFY1Q9P2R3 1169 aa6.6□□□□□ -1.35
HLA-DPA3-207ENST00000454398 DPP7Q9UHL4 492 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms