RNA–Protein interactions for RNA: ENST00000453466.1

PMPCB-205, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 5

Gene PMPCB, Length 1,509 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-205ENST00000453466 PDLIM2Q96JY6 352 aa21.78■■□□□ 1.08
PMPCB-205ENST00000453466 HAPLN2Q9GZV7 340 aa21.78■■□□□ 1.08
PMPCB-205ENST00000453466 LZTS1Q9Y250 596 aa21.78■■□□□ 1.08
PMPCB-205ENST00000453466 STYXL1Q9Y6J8 313 aa21.78■■□□□ 1.08
PMPCB-205ENST00000453466 TRANK1O15050 2925 aa21.78■■□□□ 1.08
PMPCB-205ENST00000453466 CDH23Q9H251 3354 aa21.77■■□□□ 1.08
PMPCB-205ENST00000453466 SLC11A1P49279 550 aa21.77■■□□□ 1.08
PMPCB-205ENST00000453466 DSC1Q08554 894 aa21.77■■□□□ 1.08
PMPCB-205ENST00000453466 BMT2Q1RMZ1 405 aa21.77■■□□□ 1.08
PMPCB-205ENST00000453466 SEZ6Q53EL9 994 aa21.77■■□□□ 1.08
PMPCB-205ENST00000453466 MICALL1Q8N3F8 863 aa21.77■■□□□ 1.08
PMPCB-205ENST00000453466 MAFAQ8NHW3 353 aaPredicted RBP21.77■■□□□ 1.08
PMPCB-205ENST00000453466 ZNF507Q8TCN5 953 aa21.77■■□□□ 1.08
PMPCB-205ENST00000453466 PPP1R9BQ96SB3 815 aa21.77■■□□□ 1.08
PMPCB-205ENST00000453466 PTGESO14684 152 aa21.76■■□□□ 1.07
PMPCB-205ENST00000453466 NRP1O14786 923 aa21.76■■□□□ 1.07
PMPCB-205ENST00000453466 OR1G1P47890 313 aa21.76■■□□□ 1.07
PMPCB-205ENST00000453466 STX17P56962 302 aa21.76■■□□□ 1.07
PMPCB-205ENST00000453466 LRRC63Q05C16 580 aa21.76■■□□□ 1.07
PMPCB-205ENST00000453466 CDKAL1Q5VV42 579 aa21.76■■□□□ 1.07
PMPCB-205ENST00000453466 ALKAL1Q6UXT8 129 aa21.76■■□□□ 1.07
PMPCB-205ENST00000453466 GLIS3Q8NEA6 775 aa21.76■■□□□ 1.07
PMPCB-205ENST00000453466 NOC3LQ8WTT2 800 aaKnown RBP21.76■■□□□ 1.07
PMPCB-205ENST00000453466 SCFD1Q8WVM8 642 aa21.76■■□□□ 1.07
PMPCB-205ENST00000453466 POMGNT1Q8WZA1 660 aa21.76■■□□□ 1.07
PMPCB-205ENST00000453466 IGSF21Q96ID5 467 aa21.76■■□□□ 1.07
PMPCB-205ENST00000453466 AGO2Q9UKV8 859 aaKnown RBP21.76■■□□□ 1.07
PMPCB-205ENST00000453466 RALGAPA2Q2PPJ7 1873 aa21.76■■□□□ 1.07
PMPCB-205ENST00000453466 B4GALT3O60512 393 aa21.75■■□□□ 1.07
PMPCB-205ENST00000453466 ADCY5O95622 1261 aa21.75■■□□□ 1.07
PMPCB-205ENST00000453466 PMS1P54277 932 aaKnown RBP21.75■■□□□ 1.07
PMPCB-205ENST00000453466 CCDC173Q0VFZ6 552 aa21.75■■□□□ 1.07
PMPCB-205ENST00000453466 TUSC3Q13454 348 aa21.75■■□□□ 1.07
PMPCB-205ENST00000453466 CCDC85BQ15834 202 aaPredicted RBP21.75■■□□□ 1.07
PMPCB-205ENST00000453466 XKR4Q5GH76 650 aa21.75■■□□□ 1.07
PMPCB-205ENST00000453466 PPM1EQ8WY54 764 aa21.75■■□□□ 1.07
PMPCB-205ENST00000453466 SNX27Q96L92 541 aa21.75■■□□□ 1.07
PMPCB-205ENST00000453466 COLEC11Q9BWP8 271 aa21.75■■□□□ 1.07
PMPCB-205ENST00000453466 PLEKHA5Q9HAU0 1116 aa21.75■■□□□ 1.07
PMPCB-205ENST00000453466 SMIM28A0A1B0GU29 152 aa21.75■■□□□ 1.07
PMPCB-205ENST00000453466 TISP43B9A030 160 aa21.75■■□□□ 1.07
PMPCB-205ENST00000453466 UBE4BO95155 1302 aa21.75■■□□□ 1.07
PMPCB-205ENST00000453466 SLC34A2O95436 690 aa21.75■■□□□ 1.07
PMPCB-205ENST00000453466 DNAJB1P25685 340 aa21.75■■□□□ 1.07
PMPCB-205ENST00000453466 SLC10A6Q3KNW5 377 aa21.75■■□□□ 1.07
PMPCB-205ENST00000453466 TIGD5Q53EQ6 642 aa21.75■■□□□ 1.07
PMPCB-205ENST00000453466 ANKRD40Q6AI12 368 aa21.75■■□□□ 1.07
PMPCB-205ENST00000453466 MICAL1Q8TDZ2 1067 aa21.75■■□□□ 1.07
PMPCB-205ENST00000453466 CXCL16Q9H2A7 254 aa21.75■■□□□ 1.07
PMPCB-205ENST00000453466 IKZF4Q9H2S9 585 aa21.75■■□□□ 1.07
PMPCB-205ENST00000453466 RPF1Q9H9Y2 349 aaKnown RBP21.75■■□□□ 1.07
PMPCB-205ENST00000453466 SAMSN1Q9NSI8 373 aaKnown RBP21.75■■□□□ 1.07
PMPCB-205ENST00000453466 SLC38A7Q9NVC3 462 aa21.75■■□□□ 1.07
PMPCB-205ENST00000453466 STK39Q9UEW8 545 aa21.75■■□□□ 1.07
PMPCB-205ENST00000453466 KCNE1P15382 129 aa21.74■■□□□ 1.07
PMPCB-205ENST00000453466 GARTP22102 1010 aa21.74■■□□□ 1.07
PMPCB-205ENST00000453466 ADSSP30520 456 aa21.74■■□□□ 1.07
PMPCB-205ENST00000453466 PLCB2Q00722 1185 aa21.74■■□□□ 1.07
PMPCB-205ENST00000453466 CAMK1Q14012 370 aa21.74■■□□□ 1.07
PMPCB-205ENST00000453466 BMS1Q14692 1282 aaKnown RBP21.74■■□□□ 1.07
PMPCB-205ENST00000453466 TPD52L1Q16890 204 aaPredicted RBP21.74■■□□□ 1.07
PMPCB-205ENST00000453466 GLRA4Q5JXX5 417 aa21.74■■□□□ 1.07
PMPCB-205ENST00000453466 PDE12Q6L8Q7 609 aaKnown RBP21.74■■□□□ 1.07
PMPCB-205ENST00000453466 PPP1R10Q96QC0 940 aaKnown RBP21.74■■□□□ 1.07
PMPCB-205ENST00000453466 DUSP9Q99956 384 aaKnown RBP21.74■■□□□ 1.07
PMPCB-205ENST00000453466 TRIM5Q9C035 493 aa21.74■■□□□ 1.07
PMPCB-205ENST00000453466 THAP9Q9H5L6 903 aa21.74■■□□□ 1.07
PMPCB-205ENST00000453466 TLR9Q9NR96 1032 aa21.74■■□□□ 1.07
PMPCB-205ENST00000453466 CNTN3Q9P232 1028 aa21.74■■□□□ 1.07
PMPCB-205ENST00000453466 PRG3Q9Y2Y8 225 aaPredicted RBP21.74■■□□□ 1.07
PMPCB-205ENST00000453466 FAM189A1O60320 539 aa21.73■■□□□ 1.07
PMPCB-205ENST00000453466 LDHAP00338 332 aaKnown RBP21.73■■□□□ 1.07
PMPCB-205ENST00000453466 CXCL8P10145 99 aa21.73■■□□□ 1.07
PMPCB-205ENST00000453466 TNFSF9P41273 254 aa21.73■■□□□ 1.07
PMPCB-205ENST00000453466 KNOP1Q1ED39 458 aaKnown RBP21.73■■□□□ 1.07
PMPCB-205ENST00000453466 ZCWPW2Q504Y3 356 aa21.73■■□□□ 1.07
PMPCB-205ENST00000453466 DDX53Q86TM3 631 aaKnown RBP21.73■■□□□ 1.07
PMPCB-205ENST00000453466 CD302Q8IX05 232 aa21.73■■□□□ 1.07
PMPCB-205ENST00000453466 PPP2R3CQ969Q6 453 aa21.73■■□□□ 1.07
PMPCB-205ENST00000453466 MRFAP1L1Q96HT8 127 aa21.73■■□□□ 1.07
PMPCB-205ENST00000453466 KCTD10Q9H3F6 313 aa21.73■■□□□ 1.07
PMPCB-205ENST00000453466 CPSF3Q9UKF6 684 aaKnown RBP21.73■■□□□ 1.07
PMPCB-205ENST00000453466 NLRC5Q86WI3 1866 aa21.73■■□□□ 1.07
PMPCB-205ENST00000453466 TTC26A0AVF1 554 aa21.72■■□□□ 1.07
PMPCB-205ENST00000453466 TRIM49BA6NDI0 452 aa21.72■■□□□ 1.07
PMPCB-205ENST00000453466 LRRC10BA6NIK2 292 aa21.72■■□□□ 1.07
PMPCB-205ENST00000453466 KIAA0391O15091 583 aaKnown RBP21.72■■□□□ 1.07
PMPCB-205ENST00000453466 CSPG5O95196 566 aa21.72■■□□□ 1.07
PMPCB-205ENST00000453466 ATP1A3P13637 1013 aa21.72■■□□□ 1.07
PMPCB-205ENST00000453466 HOXD13P35453 343 aa21.72■■□□□ 1.07
PMPCB-205ENST00000453466 ACOT2P49753 483 aa21.72■■□□□ 1.07
PMPCB-205ENST00000453466 ZNF75DP51815 510 aa21.72■■□□□ 1.07
PMPCB-205ENST00000453466 SNRPFP62306 86 aaKnown RBP21.72■■□□□ 1.07
PMPCB-205ENST00000453466 POU5F1Q01860 360 aaKnown RBP21.72■■□□□ 1.07
PMPCB-205ENST00000453466 PPP2R3AQ06190 1150 aa21.72■■□□□ 1.07
PMPCB-205ENST00000453466 SPAG1Q07617 926 aa21.72■■□□□ 1.07
PMPCB-205ENST00000453466 NAB2Q15742 525 aa21.72■■□□□ 1.07
PMPCB-205ENST00000453466 TMC7Q7Z402 723 aa21.72■■□□□ 1.07
PMPCB-205ENST00000453466 TMEM173Q86WV6 379 aaPredicted RBP21.72■■□□□ 1.07
PMPCB-205ENST00000453466 TSPAN18Q96SJ8 248 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms