RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 EVPLQ92817 2033 aa11.56□□□□□ -0.56
PKP4-206ENST00000452162 GOLGA8IPA6NC78 632 aa11.56□□□□□ -0.56
PKP4-206ENST00000452162 GOLGA8JA6NMD2 632 aa11.56□□□□□ -0.56
PKP4-206ENST00000452162 CD4P01730 458 aa11.56□□□□□ -0.56
PKP4-206ENST00000452162 ATP4AP20648 1035 aa11.56□□□□□ -0.56
PKP4-206ENST00000452162 STAT5BP51692 787 aa11.56□□□□□ -0.56
PKP4-206ENST00000452162 CETN1Q12798 172 aa11.56□□□□□ -0.56
PKP4-206ENST00000452162 SNRNP35Q16560 246 aaKnown RBP11.56□□□□□ -0.56
PKP4-206ENST00000452162 IFI16Q16666 785 aaKnown RBP11.56□□□□□ -0.56
PKP4-206ENST00000452162 XKR3Q5GH77 459 aa11.56□□□□□ -0.56
PKP4-206ENST00000452162 GDF6Q6KF10 455 aaPredicted RBP11.56□□□□□ -0.56
PKP4-206ENST00000452162 HDXQ7Z353 690 aa11.56□□□□□ -0.56
PKP4-206ENST00000452162 C7orf31Q8N865 590 aa11.56□□□□□ -0.56
PKP4-206ENST00000452162 PRDM5Q9NQX1 630 aaPredicted RBP11.56□□□□□ -0.56
PKP4-206ENST00000452162 RNF14Q9UBS8 474 aa11.56□□□□□ -0.56
PKP4-206ENST00000452162 NCANO14594 1321 aa11.56□□□□□ -0.56
PKP4-206ENST00000452162 TRIM43BA6NCK2 446 aa11.55□□□□□ -0.56
PKP4-206ENST00000452162 H0YGN5 161 aa11.55□□□□□ -0.56
PKP4-206ENST00000452162 FOXN3O00409 490 aaPredicted RBP11.55□□□□□ -0.56
PKP4-206ENST00000452162 LRRN2O75325 713 aa11.55□□□□□ -0.56
PKP4-206ENST00000452162 CLTBP09497 229 aa11.55□□□□□ -0.56
PKP4-206ENST00000452162 CCDC172P0C7W6 258 aa11.55□□□□□ -0.56
PKP4-206ENST00000452162 SMIM10L2AP0DMW4 78 aa11.55□□□□□ -0.56
PKP4-206ENST00000452162 SMIM10L2BP0DMW5 78 aa11.55□□□□□ -0.56
PKP4-206ENST00000452162 PAFAH1B1P43034 410 aa11.55□□□□□ -0.56
PKP4-206ENST00000452162 MXI1P50539 228 aa11.55□□□□□ -0.56
PKP4-206ENST00000452162 ZNF200P98182 395 aaPredicted RBP11.55□□□□□ -0.56
PKP4-206ENST00000452162 ARHGAP44Q17R89 818 aa11.55□□□□□ -0.56
PKP4-206ENST00000452162 CCDC181Q5TID7 509 aa11.55□□□□□ -0.56
PKP4-206ENST00000452162 TAS1R3Q7RTX0 852 aa11.55□□□□□ -0.56
PKP4-206ENST00000452162 SESTD1Q86VW0 696 aa11.55□□□□□ -0.56
PKP4-206ENST00000452162 GLYCTKQ8IVS8 523 aa11.55□□□□□ -0.56
PKP4-206ENST00000452162 TPCN2Q8NHX9 752 aa11.55□□□□□ -0.56
PKP4-206ENST00000452162 TRIM43Q96BQ3 446 aaPredicted RBP11.55□□□□□ -0.56
PKP4-206ENST00000452162 SAAL1Q96ER3 474 aa11.55□□□□□ -0.56
PKP4-206ENST00000452162 MS4A14Q96JA4 679 aa11.55□□□□□ -0.56
PKP4-206ENST00000452162 AZI2Q9H6S1 392 aa11.55□□□□□ -0.56
PKP4-206ENST00000452162 SUGCTQ9HAC7 445 aa11.55□□□□□ -0.56
PKP4-206ENST00000452162 ZNF302Q9NR11 478 aa11.55□□□□□ -0.56
PKP4-206ENST00000452162 ERAP1Q9NZ08 941 aa11.55□□□□□ -0.56
PKP4-206ENST00000452162 ARHGAP28Q9P2N2 729 aa11.55□□□□□ -0.56
PKP4-206ENST00000452162 GTF2IRD1Q9UHL9 959 aa11.55□□□□□ -0.56
PKP4-206ENST00000452162 MAFBQ9Y5Q3 323 aaPredicted RBP11.55□□□□□ -0.56
PKP4-206ENST00000452162 NR2E3Q9Y5X4 410 aa11.55□□□□□ -0.56
PKP4-206ENST00000452162 SIP14410 1827 aa11.55□□□□□ -0.56
PKP4-206ENST00000452162 GALCP54803 685 aa11.55□□□□□ -0.56
PKP4-206ENST00000452162 PLPPR4Q7Z2D5 763 aa11.55□□□□□ -0.56
PKP4-206ENST00000452162 SLFN11Q7Z7L1 901 aa11.55□□□□□ -0.56
PKP4-206ENST00000452162 HOMEZQ8IX15 550 aa11.55□□□□□ -0.56
PKP4-206ENST00000452162 RUBCNQ92622 972 aa11.55□□□□□ -0.56
PKP4-206ENST00000452162 KCNN1Q92952 543 aa11.55□□□□□ -0.56
PKP4-206ENST00000452162 MFSD14AQ96MC6 490 aa11.55□□□□□ -0.56
PKP4-206ENST00000452162 SEZ6LQ9BYH1 1024 aa11.55□□□□□ -0.56
PKP4-206ENST00000452162 POLR3FQ9H1D9 316 aaPredicted RBP11.55□□□□□ -0.56
PKP4-206ENST00000452162 UBE2TQ9NPD8 197 aaPredicted RBP11.55□□□□□ -0.56
PKP4-206ENST00000452162 TMEM39AQ9NV64 488 aa11.55□□□□□ -0.56
PKP4-206ENST00000452162 PACSIN2Q9UNF0 486 aaPredicted RBP11.55□□□□□ -0.56
PKP4-206ENST00000452162 LTBP2Q14767 1821 aa11.54□□□□□ -0.56
PKP4-206ENST00000452162 LAMA2P24043 3122 aaKnown RBP11.54□□□□□ -0.56
PKP4-206ENST00000452162 CES2O00748 559 aa11.54□□□□□ -0.56
PKP4-206ENST00000452162 OATP04181 439 aa11.54□□□□□ -0.56
PKP4-206ENST00000452162 TMEM253P0C7T8 217 aa11.54□□□□□ -0.56
PKP4-206ENST00000452162 CYP2C9P11712 490 aa11.54□□□□□ -0.56
PKP4-206ENST00000452162 ITGB8P26012 769 aa11.54□□□□□ -0.56
PKP4-206ENST00000452162 PTPN11Q06124 597 aaPredicted RBP11.54□□□□□ -0.56
PKP4-206ENST00000452162 SMC1AQ14683 1233 aaKnown RBP11.54□□□□□ -0.56
PKP4-206ENST00000452162 EMC2Q15006 297 aa11.54□□□□□ -0.56
PKP4-206ENST00000452162 PLCB4Q15147 1175 aa11.54□□□□□ -0.56
PKP4-206ENST00000452162 PTGISQ16647 500 aa11.54□□□□□ -0.56
PKP4-206ENST00000452162 MTERF2Q49AM1 385 aa11.54□□□□□ -0.56
PKP4-206ENST00000452162 CFAP221Q4G0U5 840 aa11.54□□□□□ -0.56
PKP4-206ENST00000452162 TMC2Q8TDI7 906 aa11.54□□□□□ -0.56
PKP4-206ENST00000452162 AFAP1L1Q8TED9 768 aa11.54□□□□□ -0.56
PKP4-206ENST00000452162 PARD3BQ8TEW8 1205 aa11.54□□□□□ -0.56
PKP4-206ENST00000452162 SETD4Q9NVD3 440 aa11.54□□□□□ -0.56
PKP4-206ENST00000452162 TBX21Q9UL17 535 aa11.54□□□□□ -0.56
PKP4-206ENST00000452162 COQ4Q9Y3A0 265 aa11.54□□□□□ -0.56
PKP4-206ENST00000452162 LAMA3Q16787 3333 aa11.54□□□□□ -0.56
PKP4-206ENST00000452162 LRRIQ3A6PVS8 624 aaPredicted RBP11.54□□□□□ -0.56
PKP4-206ENST00000452162 TULP1O00294 542 aaPredicted RBP11.54□□□□□ -0.56
PKP4-206ENST00000452162 TLR3O15455 904 aaKnown RBP11.54□□□□□ -0.56
PKP4-206ENST00000452162 KIF4AO95239 1232 aa11.54□□□□□ -0.56
PKP4-206ENST00000452162 GARTP22102 1010 aa11.54□□□□□ -0.56
PKP4-206ENST00000452162 NOP2P46087 812 aaKnown RBP11.54□□□□□ -0.56
PKP4-206ENST00000452162 ENPEPQ07075 957 aa11.54□□□□□ -0.56
PKP4-206ENST00000452162 CYP24A1Q07973 514 aa11.54□□□□□ -0.56
PKP4-206ENST00000452162 FAM160B1Q5W0V3 765 aa11.54□□□□□ -0.56
PKP4-206ENST00000452162 SEMA4DQ92854 862 aa11.54□□□□□ -0.56
PKP4-206ENST00000452162 IFT74Q96LB3 600 aa11.54□□□□□ -0.56
PKP4-206ENST00000452162 CEP89Q96ST8 783 aa11.54□□□□□ -0.56
PKP4-206ENST00000452162 LRRC1Q9BTT6 524 aa11.54□□□□□ -0.56
PKP4-206ENST00000452162 RBM12Q9NTZ6 932 aaKnown RBP11.54□□□□□ -0.56
PKP4-206ENST00000452162 H0YCG3 227 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 ZMYND10O75800 440 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 TNFAIP3P21580 790 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 HOXC8P31273 242 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 CASP8Q14790 479 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 RPS6KA1Q15418 735 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 CCDC70Q6NSX1 233 aa11.53□□□□□ -0.56
PKP4-206ENST00000452162 CCNI2Q6ZMN8 369 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms