RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 DAW1Q8N136 415 aa23.67■■□□□ 1.38
C9orf3-208ENST00000451893 ZDHHC7Q9NXF8 308 aa23.67■■□□□ 1.38
C9orf3-208ENST00000451893 LARSQ9P2J5 1176 aaKnown RBP23.67■■□□□ 1.38
C9orf3-208ENST00000451893 RCOR1Q9UKL0 485 aa23.67■■□□□ 1.38
C9orf3-208ENST00000451893 EFEMP2O95967 443 aa23.66■■□□□ 1.38
C9orf3-208ENST00000451893 MCF2P10911 925 aa23.66■■□□□ 1.38
C9orf3-208ENST00000451893 UBE2HP62256 183 aa23.66■■□□□ 1.38
C9orf3-208ENST00000451893 HYIQ5T013 277 aa23.66■■□□□ 1.38
C9orf3-208ENST00000451893 DCLRE1AQ6PJP8 1040 aa23.66■■□□□ 1.38
C9orf3-208ENST00000451893 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.66■■□□□ 1.38
C9orf3-208ENST00000451893 CEP120Q8N960 986 aa23.66■■□□□ 1.38
C9orf3-208ENST00000451893 PIK3R5Q8WYR1 880 aa23.66■■□□□ 1.38
C9orf3-208ENST00000451893 PNMA5Q96PV4 448 aa23.66■■□□□ 1.38
C9orf3-208ENST00000451893 ZHX3Q9H4I2 956 aa23.66■■□□□ 1.38
C9orf3-208ENST00000451893 SLC26A4O43511 780 aa23.65■■□□□ 1.38
C9orf3-208ENST00000451893 FAM13AO94988 1023 aa23.65■■□□□ 1.38
C9orf3-208ENST00000451893 C1RP00736 705 aa23.65■■□□□ 1.38
C9orf3-208ENST00000451893 CLCNKBP51801 687 aa23.65■■□□□ 1.38
C9orf3-208ENST00000451893 CACNB1Q02641 598 aaPredicted RBP23.65■■□□□ 1.38
C9orf3-208ENST00000451893 MAPK7Q13164 816 aa23.65■■□□□ 1.38
C9orf3-208ENST00000451893 NOLC1Q14978 699 aaKnown RBP eCLIP23.65■■□□□ 1.38
C9orf3-208ENST00000451893 PPM1LQ5SGD2 360 aa23.65■■□□□ 1.38
C9orf3-208ENST00000451893 GPBP1Q86WP2 473 aa23.65■■□□□ 1.38
C9orf3-208ENST00000451893 SPIRE2Q8WWL2 714 aa23.65■■□□□ 1.38
C9orf3-208ENST00000451893 ASIC4Q96FT7 647 aa23.65■■□□□ 1.38
C9orf3-208ENST00000451893 SPATA32Q96LK8 384 aa23.65■■□□□ 1.38
C9orf3-208ENST00000451893 CXCL16Q9H2A7 254 aa23.65■■□□□ 1.38
C9orf3-208ENST00000451893 WDR6Q9NNW5 1121 aaKnown RBP23.65■■□□□ 1.38
C9orf3-208ENST00000451893 FBXL21Q9UKT6 434 aa23.65■■□□□ 1.38
C9orf3-208ENST00000451893 POLIQ9UNA4 740 aa23.65■■□□□ 1.38
C9orf3-208ENST00000451893 NUB1Q9Y5A7 615 aa23.65■■□□□ 1.38
C9orf3-208ENST00000451893 MUC6Q6W4X9 2439 aa23.65■■□□□ 1.38
C9orf3-208ENST00000451893 SMIM28A0A1B0GU29 152 aa23.64■■□□□ 1.37
C9orf3-208ENST00000451893 RFX1P22670 979 aa23.64■■□□□ 1.37
C9orf3-208ENST00000451893 SLC12A3P55017 1021 aa23.64■■□□□ 1.37
C9orf3-208ENST00000451893 FAM173BQ6P4H8 233 aa23.64■■□□□ 1.37
C9orf3-208ENST00000451893 GET4Q7L5D6 327 aaPredicted RBP23.64■■□□□ 1.37
C9orf3-208ENST00000451893 LEO1Q8WVC0 666 aaPredicted RBP23.64■■□□□ 1.37
C9orf3-208ENST00000451893 DDX27Q96GQ7 796 aaKnown RBP23.64■■□□□ 1.37
C9orf3-208ENST00000451893 PPP1R10Q96QC0 940 aaKnown RBP23.64■■□□□ 1.37
C9orf3-208ENST00000451893 GOLGA2P5Q9HBQ8 144 aa23.64■■□□□ 1.37
C9orf3-208ENST00000451893 CLDN3O15551 220 aa23.63■■□□□ 1.37
C9orf3-208ENST00000451893 TOM1L1O75674 476 aa23.63■■□□□ 1.37
C9orf3-208ENST00000451893 YEATS4O95619 227 aa23.63■■□□□ 1.37
C9orf3-208ENST00000451893 LONP1P36776 959 aaKnown RBP23.63■■□□□ 1.37
C9orf3-208ENST00000451893 PTPN5P54829 565 aa23.63■■□□□ 1.37
C9orf3-208ENST00000451893 SF3A1Q15459 793 aaKnown RBP23.63■■□□□ 1.37
C9orf3-208ENST00000451893 TMEM119Q4V9L6 283 aa23.63■■□□□ 1.37
C9orf3-208ENST00000451893 LNX1Q8TBB1 728 aaPredicted RBP23.63■■□□□ 1.37
C9orf3-208ENST00000451893 FEZF2Q8TBJ5 459 aa23.63■■□□□ 1.37
C9orf3-208ENST00000451893 PRKD2Q9BZL6 878 aa23.63■■□□□ 1.37
C9orf3-208ENST00000451893 TFIP11Q9UBB9 837 aaKnown RBP23.63■■□□□ 1.37
C9orf3-208ENST00000451893 ZNF318Q5VUA4 2279 aa23.63■■□□□ 1.37
C9orf3-208ENST00000451893 NPHP3-ACAD11A0A0J9YXS1 232 aa23.62■■□□□ 1.37
C9orf3-208ENST00000451893 TMEM189-UBE2V1I3L0A0 370 aa23.62■■□□□ 1.37
C9orf3-208ENST00000451893 K7ENM7 598 aa23.62■■□□□ 1.37
C9orf3-208ENST00000451893 XYLBO75191 536 aa23.62■■□□□ 1.37
C9orf3-208ENST00000451893 TBCAO75347 108 aaKnown RBP23.62■■□□□ 1.37
C9orf3-208ENST00000451893 ZMYND10O75800 440 aa23.62■■□□□ 1.37
C9orf3-208ENST00000451893 LIG4P49917 911 aa23.62■■□□□ 1.37
C9orf3-208ENST00000451893 TDGQ13569 410 aa23.62■■□□□ 1.37
C9orf3-208ENST00000451893 NAB2Q15742 525 aa23.62■■□□□ 1.37
C9orf3-208ENST00000451893 ANKS3Q6ZW76 656 aa23.62■■□□□ 1.37
C9orf3-208ENST00000451893 TAS1R3Q7RTX0 852 aa23.62■■□□□ 1.37
C9orf3-208ENST00000451893 MYCT1Q8N699 235 aa23.62■■□□□ 1.37
C9orf3-208ENST00000451893 CHAMP1Q96JM3 812 aa23.62■■□□□ 1.37
C9orf3-208ENST00000451893 SNX27Q96L92 541 aa23.62■■□□□ 1.37
C9orf3-208ENST00000451893 IGSF9Q9P2J2 1179 aa23.62■■□□□ 1.37
C9orf3-208ENST00000451893 ODF2LQ9ULJ1 636 aa23.62■■□□□ 1.37
C9orf3-208ENST00000451893 VWA8A3KMH1 1905 aa23.62■■□□□ 1.37
C9orf3-208ENST00000451893 TCHHQ07283 1943 aa23.62■■□□□ 1.37
C9orf3-208ENST00000451893 PODXLO00592 558 aa23.61■■□□□ 1.37
C9orf3-208ENST00000451893 C8AP07357 584 aa23.61■■□□□ 1.37
C9orf3-208ENST00000451893 OR1D2P34982 312 aa23.61■■□□□ 1.37
C9orf3-208ENST00000451893 TXLNAP40222 546 aa23.61■■□□□ 1.37
C9orf3-208ENST00000451893 NASPP49321 788 aaPredicted RBP23.61■■□□□ 1.37
C9orf3-208ENST00000451893 NHLH1Q02575 133 aa23.61■■□□□ 1.37
C9orf3-208ENST00000451893 UPP1Q16831 310 aa23.61■■□□□ 1.37
C9orf3-208ENST00000451893 TMEM161BQ8NDZ6 487 aa23.61■■□□□ 1.37
C9orf3-208ENST00000451893 KCNG4Q8TDN1 519 aa23.61■■□□□ 1.37
C9orf3-208ENST00000451893 USP28Q96RU2 1077 aa23.61■■□□□ 1.37
C9orf3-208ENST00000451893 CLSTN3Q9BQT9 956 aa23.61■■□□□ 1.37
C9orf3-208ENST00000451893 NTPCRQ9BSD7 190 aaKnown RBP23.61■■□□□ 1.37
C9orf3-208ENST00000451893 RHOBTB2Q9BYZ6 727 aa23.61■■□□□ 1.37
C9orf3-208ENST00000451893 SMOC2Q9H3U7 446 aa23.61■■□□□ 1.37
C9orf3-208ENST00000451893 KCNK12Q9HB15 430 aa23.61■■□□□ 1.37
C9orf3-208ENST00000451893 PTPRHQ9HD43 1115 aa23.61■■□□□ 1.37
C9orf3-208ENST00000451893 FBXW11Q9UKB1 542 aa23.61■■□□□ 1.37
C9orf3-208ENST00000451893 KMT2EQ8IZD2 1858 aa23.6■■□□□ 1.37
C9orf3-208ENST00000451893 GOLGA6L4A6NEF3 574 aa23.6■■□□□ 1.37
C9orf3-208ENST00000451893 I3L4J1 428 aa23.6■■□□□ 1.37
C9orf3-208ENST00000451893 MAPTP10636 758 aaKnown RBP23.6■■□□□ 1.37
C9orf3-208ENST00000451893 PLCG1P19174 1290 aa23.6■■□□□ 1.37
C9orf3-208ENST00000451893 TKTP29401 623 aaKnown RBP23.6■■□□□ 1.37
C9orf3-208ENST00000451893 AVPR2P30518 371 aa23.6■■□□□ 1.37
C9orf3-208ENST00000451893 KARSQ15046 597 aaKnown RBP23.6■■□□□ 1.37
C9orf3-208ENST00000451893 LILRA6Q6PI73 481 aa23.6■■□□□ 1.37
C9orf3-208ENST00000451893 ZPBP2Q6X784 338 aa23.6■■□□□ 1.37
C9orf3-208ENST00000451893 ALYREFQ86V81 257 aaKnown RBP23.6■■□□□ 1.37
C9orf3-208ENST00000451893 ZBTB45Q96K62 511 aaPredicted RBP23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms