RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 PDILTQ8N807 584 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 ACRBPQ8NEB7 543 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 CCDC148Q8NFR7 591 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 FAM76AQ8TAV0 307 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 CAVIN3Q969G5 261 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 ZKSCAN4Q969J2 545 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 OSBP2Q969R2 916 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 CABS1Q96KC9 395 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 CTAGE1Q96RT6 745 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 MMS19Q96T76 1030 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 ALG1Q9BT22 464 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 SELENOOQ9BVL4 669 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 CAPS2Q9BXY5 557 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 PLEKHA4Q9H4M7 779 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 HAUS4Q9H6D7 363 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 LZTFL1Q9NQ48 299 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 ABHD10Q9NUJ1 306 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 GNL3LQ9NVN8 582 aaKnown RBP4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 PAG1Q9NWQ8 432 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 MARCH2Q9P0N8 246 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 SCN11AQ9UI33 1791 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 HOOK1Q9UJC3 728 aaKnown RBP4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 SUFUQ9UMX1 484 aa4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 SRPRBQ9Y5M8 271 aaKnown RBP4.59□□□□□ -1.67
HMGB3P22-202ENST00000451823 MYH7P12883 1935 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 NUP188Q5SRE5 1749 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 TNRQ92752 1358 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 ZNF536O15090 1300 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 PRAMEF22A3QJZ6 481 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 GOLGA6CA6NDK9 693 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 GOLGA8BA8MQT2 603 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 C22orf46C9J442 243 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 DDX3XO00571 662 aaKnown RBP eCLIP4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 CHUKO15111 745 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 MEFVO15553 781 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 RANBP6O60518 1105 aaKnown RBP4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 CIAO1O76071 339 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 RECKO95980 971 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 FGAP02671 866 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 ATP1A1P05023 1023 aaKnown RBP4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 C8BP07358 591 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 ZFYP08048 801 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 GOLGA6DP0CG33 693 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 SOX9P48436 509 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 HERVK_113P62684 666 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 CKAP4Q07065 602 aaKnown RBP4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 ACTN3Q08043 901 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 GRB10Q13322 594 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 MEA1Q16626 185 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 TTMPQ5BVD1 217 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 ALS2CLQ60I27 953 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 CPZQ66K79 652 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 CPLX2Q6PUV4 134 aaKnown RBP4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 CYP26C1Q6V0L0 522 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 KDM7AQ6ZMT4 941 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 B4GALNT4Q76KP1 1039 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 CHST3Q7LGC8 479 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 MILR1Q7Z6M3 343 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 SGMS1Q86VZ5 419 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 MREGQ8N565 214 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 ZNF513Q8N8E2 541 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 KYQ8NBH2 561 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 NCOA7Q8NI08 942 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 IGDCC4Q8TDY8 1250 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 TBC1D22AQ8WUA7 517 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 CPLX3Q8WVH0 158 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 RIN2Q8WYP3 895 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 COPS5Q92905 334 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 MIEF2Q96C03 454 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 FAXDC2Q96IV6 333 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 C8orf49Q96NF6 230 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 AIFM3Q96NN9 605 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 GSDMAQ96QA5 445 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 MMP19Q99542 508 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 DNAJC7Q99615 494 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 VCPKMTQ9H867 229 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 AATFQ9NY61 560 aaKnown RBP eCLIP4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 GOLGA6AQ9NYA3 693 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 APEX2Q9UBZ4 518 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 FAM184BQ9ULE4 1060 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 INVSQ9Y283 1065 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 EPN1Q9Y6I3 576 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 KIF13AQ9H1H9 1805 aa4.58□□□□□ -1.68
HMGB3P22-202ENST00000451823 C1orf167Q5SNV9 1468 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 UBN2Q6ZU65 1347 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 SYNRGQ9UMZ2 1314 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 MYH8P13535 1937 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 AKAP11Q9UKA4 1901 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 A0A087X0B3 334 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 ANKRD34BA5PLL1 514 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 C5orf60A6NFR6 353 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 MROH6A6NGR9 719 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 GOLIM4O00461 696 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 AKAP8O43823 692 aaKnown RBP4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 OPA1O60313 960 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 CDKL5O76039 1030 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 NDUFA10O95299 355 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 PLATP00750 562 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 FSHBP01225 129 aa4.57□□□□□ -1.68
HMGB3P22-202ENST00000451823 MMP1P03956 469 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms