RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 FNBP1Q96RU3 617 aa12.94□□□□□ -0.34
COL27A1-202ENST00000451716 CENPHQ9H3R5 247 aa12.94□□□□□ -0.34
COL27A1-202ENST00000451716 FBXO40Q9UH90 709 aa12.94□□□□□ -0.34
COL27A1-202ENST00000451716 AGO2Q9UKV8 859 aaKnown RBP12.94□□□□□ -0.34
COL27A1-202ENST00000451716 LCTP09848 1927 aa12.94□□□□□ -0.34
COL27A1-202ENST00000451716 SOWAHBA6NEL2 793 aa12.93□□□□□ -0.34
COL27A1-202ENST00000451716 K7ERI5 159 aa12.93□□□□□ -0.34
COL27A1-202ENST00000451716 TPD52L2O43399 206 aaKnown RBP12.93□□□□□ -0.34
COL27A1-202ENST00000451716 GRIN3BO60391 1043 aa12.93□□□□□ -0.34
COL27A1-202ENST00000451716 GARTP22102 1010 aa12.93□□□□□ -0.34
COL27A1-202ENST00000451716 MARK3P27448 753 aa12.93□□□□□ -0.34
COL27A1-202ENST00000451716 POU5F1Q01860 360 aaKnown RBP12.93□□□□□ -0.34
COL27A1-202ENST00000451716 PPFIA1Q13136 1202 aa12.93□□□□□ -0.34
COL27A1-202ENST00000451716 LY6KQ17RY6 165 aa12.93□□□□□ -0.34
COL27A1-202ENST00000451716 NOL9Q5SY16 702 aaKnown RBP12.93□□□□□ -0.34
COL27A1-202ENST00000451716 DEPTORQ8TB45 409 aa12.93□□□□□ -0.34
COL27A1-202ENST00000451716 CPA5Q8WXQ8 436 aa12.93□□□□□ -0.34
COL27A1-202ENST00000451716 C18orf8Q96DM3 657 aa12.93□□□□□ -0.34
COL27A1-202ENST00000451716 CLMNQ96JQ2 1002 aa12.93□□□□□ -0.34
COL27A1-202ENST00000451716 ZNF668Q96K58 619 aaPredicted RBP12.93□□□□□ -0.34
COL27A1-202ENST00000451716 PCYT2Q99447 389 aa12.93□□□□□ -0.34
COL27A1-202ENST00000451716 ARID2Q68CP9 1835 aa12.93□□□□□ -0.34
COL27A1-202ENST00000451716 GOLGA8KD6RF30 607 aa12.93□□□□□ -0.34
COL27A1-202ENST00000451716 SPOPO43791 374 aa12.93□□□□□ -0.34
COL27A1-202ENST00000451716 EXTL3O43909 919 aa12.93□□□□□ -0.34
COL27A1-202ENST00000451716 PGK2P07205 417 aa12.93□□□□□ -0.34
COL27A1-202ENST00000451716 PYGMP11217 842 aa12.93□□□□□ -0.34
COL27A1-202ENST00000451716 GZMAP12544 262 aa12.93□□□□□ -0.34
COL27A1-202ENST00000451716 HSD17B3P37058 310 aa12.93□□□□□ -0.34
COL27A1-202ENST00000451716 CUL1Q13616 776 aa12.93□□□□□ -0.34
COL27A1-202ENST00000451716 UAP1Q16222 522 aaPredicted RBP12.93□□□□□ -0.34
COL27A1-202ENST00000451716 TDRD10Q5VZ19 366 aaKnown RBP12.93□□□□□ -0.34
COL27A1-202ENST00000451716 CRELD2Q6UXH1 353 aaPredicted RBP12.93□□□□□ -0.34
COL27A1-202ENST00000451716 TRIM50Q86XT4 487 aa12.93□□□□□ -0.34
COL27A1-202ENST00000451716 SLC7A3Q8WY07 619 aa12.93□□□□□ -0.34
COL27A1-202ENST00000451716 VTI1AQ96AJ9 217 aa12.93□□□□□ -0.34
COL27A1-202ENST00000451716 ZSWIM1Q9BR11 485 aa12.93□□□□□ -0.34
COL27A1-202ENST00000451716 MAF1Q9H063 256 aa12.93□□□□□ -0.34
COL27A1-202ENST00000451716 PORCNQ9H237 461 aa12.93□□□□□ -0.34
COL27A1-202ENST00000451716 SLITRK6Q9H5Y7 841 aa12.93□□□□□ -0.34
COL27A1-202ENST00000451716 DHX33Q9H6R0 707 aaKnown RBP12.93□□□□□ -0.34
COL27A1-202ENST00000451716 ELP3Q9H9T3 547 aa12.93□□□□□ -0.34
COL27A1-202ENST00000451716 GSTTP1A0A1W2PQM5 241 aa12.92□□□□□ -0.34
COL27A1-202ENST00000451716 AP1G2O75843 785 aa12.92□□□□□ -0.34
COL27A1-202ENST00000451716 STAM2O75886 525 aa12.92□□□□□ -0.34
COL27A1-202ENST00000451716 HLA-DRAP01903 254 aa12.92□□□□□ -0.34
COL27A1-202ENST00000451716 CFHP08603 1231 aa12.92□□□□□ -0.34
COL27A1-202ENST00000451716 RTP1P59025 263 aa12.92□□□□□ -0.34
COL27A1-202ENST00000451716 SETDB1Q15047 1291 aa12.92□□□□□ -0.34
COL27A1-202ENST00000451716 CEP85LQ5SZL2 805 aa12.92□□□□□ -0.34
COL27A1-202ENST00000451716 DAB2IPQ5VWQ8 1189 aa12.92□□□□□ -0.34
COL27A1-202ENST00000451716 C11orf63Q6NUN7 778 aa12.92□□□□□ -0.34
COL27A1-202ENST00000451716 USP37Q86T82 979 aa12.92□□□□□ -0.34
COL27A1-202ENST00000451716 MREGQ8N565 214 aa12.92□□□□□ -0.34
COL27A1-202ENST00000451716 CHST13Q8NET6 341 aa12.92□□□□□ -0.34
COL27A1-202ENST00000451716 C1orf112Q9NSG2 853 aa12.92□□□□□ -0.34
COL27A1-202ENST00000451716 TTC7AQ9ULT0 858 aaPredicted RBP12.92□□□□□ -0.34
COL27A1-202ENST00000451716 UTP11Q9Y3A2 253 aaKnown RBP12.92□□□□□ -0.34
COL27A1-202ENST00000451716 FARP2O94887 1054 aaPredicted RBP12.92□□□□□ -0.34
COL27A1-202ENST00000451716 HSPA9P38646 679 aaKnown RBP12.92□□□□□ -0.34
COL27A1-202ENST00000451716 PIK3CAP42336 1068 aa12.92□□□□□ -0.34
COL27A1-202ENST00000451716 PEX5P50542 639 aa12.92□□□□□ -0.34
COL27A1-202ENST00000451716 PTENP60484 403 aa12.92□□□□□ -0.34
COL27A1-202ENST00000451716 DR1Q01658 176 aa12.92□□□□□ -0.34
COL27A1-202ENST00000451716 SH3D19Q5HYK7 790 aa12.92□□□□□ -0.34
COL27A1-202ENST00000451716 PASD1Q8IV76 773 aa12.92□□□□□ -0.34
COL27A1-202ENST00000451716 UBL4BQ8N7F7 174 aa12.92□□□□□ -0.34
COL27A1-202ENST00000451716 DNERQ8NFT8 737 aa12.92□□□□□ -0.34
COL27A1-202ENST00000451716 UBLCP1Q8WVY7 318 aaPredicted RBP12.92□□□□□ -0.34
COL27A1-202ENST00000451716 PSPC1Q8WXF1 523 aaKnown RBP12.92□□□□□ -0.34
COL27A1-202ENST00000451716 CNOT8Q9UFF9 292 aaKnown RBP12.92□□□□□ -0.34
COL27A1-202ENST00000451716 ZNFX1Q9P2E3 1918 aaKnown RBP12.92□□□□□ -0.34
COL27A1-202ENST00000451716 ATG7O95352 703 aa12.91□□□□□ -0.34
COL27A1-202ENST00000451716 VNN1O95497 513 aa12.91□□□□□ -0.34
COL27A1-202ENST00000451716 GTF2H1P32780 548 aa12.91□□□□□ -0.34
COL27A1-202ENST00000451716 HADHBP55084 474 aaKnown RBP12.91□□□□□ -0.34
COL27A1-202ENST00000451716 MSTO1Q9BUK6 570 aa12.91□□□□□ -0.34
COL27A1-202ENST00000451716 SPATC1LQ9H0A9 340 aa12.91□□□□□ -0.34
COL27A1-202ENST00000451716 RBAKQ9NYW8 714 aaPredicted RBP12.91□□□□□ -0.34
COL27A1-202ENST00000451716 CSADQ9Y600 493 aa12.91□□□□□ -0.34
COL27A1-202ENST00000451716 GGPS1O95749 300 aa12.91□□□□□ -0.34
COL27A1-202ENST00000451716 CYP1A2P05177 515 aa12.91□□□□□ -0.34
COL27A1-202ENST00000451716 TCF7P36402 384 aaPredicted RBP12.91□□□□□ -0.34
COL27A1-202ENST00000451716 MCCD1P59942 119 aaPredicted RBP12.91□□□□□ -0.34
COL27A1-202ENST00000451716 ZRSR2Q15696 482 aaKnown RBP12.91□□□□□ -0.34
COL27A1-202ENST00000451716 C15orf39Q6ZRI6 1047 aa12.91□□□□□ -0.34
COL27A1-202ENST00000451716 PRELID2Q8N945 189 aa12.91□□□□□ -0.34
COL27A1-202ENST00000451716 OR5B17Q8NGF7 314 aa12.91□□□□□ -0.34
COL27A1-202ENST00000451716 ZBTB10Q96DT7 871 aa12.91□□□□□ -0.34
COL27A1-202ENST00000451716 SH3GL3Q99963 347 aa12.91□□□□□ -0.34
COL27A1-202ENST00000451716 APOBEC3GQ9HC16 384 aaKnown RBP12.91□□□□□ -0.34
COL27A1-202ENST00000451716 LRRC4CQ9HCJ2 640 aa12.91□□□□□ -0.34
COL27A1-202ENST00000451716 SNX24Q9Y343 169 aa12.91□□□□□ -0.34
COL27A1-202ENST00000451716 UMODL1Q5DID0 1318 aa12.91□□□□□ -0.34
COL27A1-202ENST00000451716 GOLGA6L10A0A0M3HER8 536 aa12.91□□□□□ -0.34
COL27A1-202ENST00000451716 BHMG1C9JSJ3 638 aaPredicted RBP12.91□□□□□ -0.34
COL27A1-202ENST00000451716 ARIH2O95376 493 aa12.91□□□□□ -0.34
COL27A1-202ENST00000451716 C4BPAP04003 597 aaKnown RBP12.91□□□□□ -0.34
COL27A1-202ENST00000451716 ICAM3P32942 547 aa12.91□□□□□ -0.34
COL27A1-202ENST00000451716 CTNNA1P35221 906 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms