RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 NT5DC4Q86YG4 428 aa13.1□□□□□ -0.31
SMPD4-212ENST00000451542 BEST2Q8NFU1 509 aa13.1□□□□□ -0.31
SMPD4-212ENST00000451542 GOLGA5Q8TBA6 731 aa13.1□□□□□ -0.31
SMPD4-212ENST00000451542 ZNF507Q8TCN5 953 aa13.1□□□□□ -0.31
SMPD4-212ENST00000451542 CASP10Q92851 521 aa13.1□□□□□ -0.31
SMPD4-212ENST00000451542 KIF12Q96FN5 646 aa13.1□□□□□ -0.31
SMPD4-212ENST00000451542 ASB2Q96Q27 587 aa13.1□□□□□ -0.31
SMPD4-212ENST00000451542 KIAA1586Q9HCI6 787 aa13.1□□□□□ -0.31
SMPD4-212ENST00000451542 MARCH5Q9NX47 278 aa13.1□□□□□ -0.31
SMPD4-212ENST00000451542 CPSF3Q9UKF6 684 aaKnown RBP13.1□□□□□ -0.31
SMPD4-212ENST00000451542 DERAQ9Y315 318 aa13.1□□□□□ -0.31
SMPD4-212ENST00000451542 BRWD1Q9NSI6 2320 aa13.1□□□□□ -0.31
SMPD4-212ENST00000451542 TTC26A0AVF1 554 aa13.09□□□□□ -0.31
SMPD4-212ENST00000451542 C2orf71A6NGG8 1288 aa13.09□□□□□ -0.31
SMPD4-212ENST00000451542 SPDYE4A6NLX3 237 aa13.09□□□□□ -0.31
SMPD4-212ENST00000451542 KINO60870 393 aaKnown RBP13.09□□□□□ -0.31
SMPD4-212ENST00000451542 IL18RAPO95256 599 aa13.09□□□□□ -0.31
SMPD4-212ENST00000451542 ADH1AP07327 375 aa13.09□□□□□ -0.31
SMPD4-212ENST00000451542 KLRC2P26717 231 aa13.09□□□□□ -0.31
SMPD4-212ENST00000451542 CASP5P51878 434 aa13.09□□□□□ -0.31
SMPD4-212ENST00000451542 FAM160A1Q05DH4 1040 aa13.09□□□□□ -0.31
SMPD4-212ENST00000451542 ADAM15Q13444 863 aa13.09□□□□□ -0.31
SMPD4-212ENST00000451542 SURF1Q15526 300 aa13.09□□□□□ -0.31
SMPD4-212ENST00000451542 SLC39A4Q6P5W5 647 aa13.09□□□□□ -0.31
SMPD4-212ENST00000451542 ADGRD2Q7Z7M1 963 aa13.09□□□□□ -0.31
SMPD4-212ENST00000451542 GTPBP4Q9BZE4 634 aaKnown RBP13.09□□□□□ -0.31
SMPD4-212ENST00000451542 PRDM6Q9NQX0 595 aa13.09□□□□□ -0.31
SMPD4-212ENST00000451542 RMND1Q9NWS8 449 aa13.09□□□□□ -0.31
SMPD4-212ENST00000451542 R3HCC1Q9Y3T6 440 aaKnown RBP13.09□□□□□ -0.31
SMPD4-212ENST00000451542 LAMA2P24043 3122 aaKnown RBP13.09□□□□□ -0.31
SMPD4-212ENST00000451542 ARHGEF37A1IGU5 675 aa13.08□□□□□ -0.32
SMPD4-212ENST00000451542 HIDE1A8MVS5 230 aa13.08□□□□□ -0.32
SMPD4-212ENST00000451542 TULP1O00294 542 aaPredicted RBP13.08□□□□□ -0.32
SMPD4-212ENST00000451542 PODXLO00592 558 aa13.08□□□□□ -0.32
SMPD4-212ENST00000451542 PER2O15055 1255 aa13.08□□□□□ -0.32
SMPD4-212ENST00000451542 EXTL3O43909 919 aa13.08□□□□□ -0.32
SMPD4-212ENST00000451542 KIF4AO95239 1232 aa13.08□□□□□ -0.32
SMPD4-212ENST00000451542 SMC2O95347 1197 aa13.08□□□□□ -0.32
SMPD4-212ENST00000451542 RPN1P04843 607 aaKnown RBP13.08□□□□□ -0.32
SMPD4-212ENST00000451542 HOXB8P17481 243 aaPredicted RBP13.08□□□□□ -0.32
SMPD4-212ENST00000451542 TNFSF9P41273 254 aa13.08□□□□□ -0.32
SMPD4-212ENST00000451542 ACOT2P49753 483 aa13.08□□□□□ -0.32
SMPD4-212ENST00000451542 CLCNKBP51801 687 aa13.08□□□□□ -0.32
SMPD4-212ENST00000451542 DSG1Q02413 1049 aa13.08□□□□□ -0.32
SMPD4-212ENST00000451542 KCNA1Q09470 495 aa13.08□□□□□ -0.32
SMPD4-212ENST00000451542 COL19A1Q14993 1142 aa13.08□□□□□ -0.32
SMPD4-212ENST00000451542 PTPN14Q15678 1187 aa13.08□□□□□ -0.32
SMPD4-212ENST00000451542 NAB2Q15742 525 aa13.08□□□□□ -0.32
SMPD4-212ENST00000451542 ENOX2Q16206 610 aaKnown RBP13.08□□□□□ -0.32
SMPD4-212ENST00000451542 UPP1Q16831 310 aa13.08□□□□□ -0.32
SMPD4-212ENST00000451542 CTC1Q2NKJ3 1217 aa13.08□□□□□ -0.32
SMPD4-212ENST00000451542 LEXMQ3ZCV2 418 aa13.08□□□□□ -0.32
SMPD4-212ENST00000451542 KMT5BQ4FZB7 885 aa13.08□□□□□ -0.32
SMPD4-212ENST00000451542 FAM171A1Q5VUB5 890 aa13.08□□□□□ -0.32
SMPD4-212ENST00000451542 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.08□□□□□ -0.32
SMPD4-212ENST00000451542 EPM2AIP1Q7L775 607 aaPredicted RBP13.08□□□□□ -0.32
SMPD4-212ENST00000451542 CEP57Q86XR8 500 aa13.08□□□□□ -0.32
SMPD4-212ENST00000451542 GRAMD1CQ8IYS0 662 aa13.08□□□□□ -0.32
SMPD4-212ENST00000451542 GPD1LQ8N335 351 aa13.08□□□□□ -0.32
SMPD4-212ENST00000451542 NOC3LQ8WTT2 800 aaKnown RBP13.08□□□□□ -0.32
SMPD4-212ENST00000451542 CACTINQ8WUQ7 758 aaKnown RBP13.08□□□□□ -0.32
SMPD4-212ENST00000451542 BCL7CQ8WUZ0 217 aaPredicted RBP13.08□□□□□ -0.32
SMPD4-212ENST00000451542 TIGD1Q96MW7 591 aa13.08□□□□□ -0.32
SMPD4-212ENST00000451542 TTPALQ9BTX7 342 aa13.08□□□□□ -0.32
SMPD4-212ENST00000451542 HAPLN2Q9GZV7 340 aa13.08□□□□□ -0.32
SMPD4-212ENST00000451542 SLC39A2Q9NP94 309 aa13.08□□□□□ -0.32
SMPD4-212ENST00000451542 C2CD2Q9Y426 696 aa13.08□□□□□ -0.32
SMPD4-212ENST00000451542 ZNF233A6NK53 670 aa13.07□□□□□ -0.32
SMPD4-212ENST00000451542 LACTBL1A8MY62 500 aa13.07□□□□□ -0.32
SMPD4-212ENST00000451542 C2CD2LO14523 706 aa13.07□□□□□ -0.32
SMPD4-212ENST00000451542 CLASP2O75122 1294 aaKnown RBP13.07□□□□□ -0.32
SMPD4-212ENST00000451542 C1RP00736 705 aa13.07□□□□□ -0.32
SMPD4-212ENST00000451542 ADRB2P07550 413 aa13.07□□□□□ -0.32
SMPD4-212ENST00000451542 CASP1P29466 404 aa13.07□□□□□ -0.32
SMPD4-212ENST00000451542 MCM4P33991 863 aa13.07□□□□□ -0.32
SMPD4-212ENST00000451542 EHHADHQ08426 723 aa13.07□□□□□ -0.32
SMPD4-212ENST00000451542 KCNB1Q14721 858 aa13.07□□□□□ -0.32
SMPD4-212ENST00000451542 TMEM132DQ14C87 1099 aa13.07□□□□□ -0.32
SMPD4-212ENST00000451542 KNOP1Q1ED39 458 aaKnown RBP13.07□□□□□ -0.32
SMPD4-212ENST00000451542 BMT2Q1RMZ1 405 aa13.07□□□□□ -0.32
SMPD4-212ENST00000451542 TMEM184AQ6ZMB5 413 aa13.07□□□□□ -0.32
SMPD4-212ENST00000451542 RNF168Q8IYW5 571 aaPredicted RBP13.07□□□□□ -0.32
SMPD4-212ENST00000451542 HASPINQ8TF76 798 aa13.07□□□□□ -0.32
SMPD4-212ENST00000451542 RIN2Q8WYP3 895 aaPredicted RBP13.07□□□□□ -0.32
SMPD4-212ENST00000451542 HPS3Q969F9 1004 aa13.07□□□□□ -0.32
SMPD4-212ENST00000451542 ZMAT2Q96NC0 199 aaKnown RBP13.07□□□□□ -0.32
SMPD4-212ENST00000451542 PAAF1Q9BRP4 392 aa13.07□□□□□ -0.32
SMPD4-212ENST00000451542 FAM213AQ9BRX8 229 aa13.07□□□□□ -0.32
SMPD4-212ENST00000451542 GPR62Q9BZJ7 368 aa13.07□□□□□ -0.32
SMPD4-212ENST00000451542 GOLPH3LQ9H4A5 285 aa13.07□□□□□ -0.32
SMPD4-212ENST00000451542 CHST7Q9NS84 486 aa13.07□□□□□ -0.32
SMPD4-212ENST00000451542 DZANK1Q9NVP4 752 aa13.07□□□□□ -0.32
SMPD4-212ENST00000451542 RBAKQ9NYW8 714 aaPredicted RBP13.07□□□□□ -0.32
SMPD4-212ENST00000451542 CD207Q9UJ71 328 aa13.07□□□□□ -0.32
SMPD4-212ENST00000451542 PCDHGC5Q9Y5F6 944 aa13.07□□□□□ -0.32
SMPD4-212ENST00000451542 ATG2AQ2TAZ0 1938 aa13.06□□□□□ -0.32
SMPD4-212ENST00000451542 TISP43B9A030 160 aa13.06□□□□□ -0.32
SMPD4-212ENST00000451542 H3BQ06 376 aaPredicted RBP13.06□□□□□ -0.32
SMPD4-212ENST00000451542 SYN3O14994 580 aa13.06□□□□□ -0.32
SMPD4-212ENST00000451542 KLRC4O43908 158 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms