RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 DNAJC18Q9H819 358 aa13.14□□□□□ -0.31
UBE3B-204ENST00000449510 AGPAT3Q9NRZ7 376 aa13.14□□□□□ -0.31
UBE3B-204ENST00000449510 AJAP1Q9UKB5 411 aaPredicted RBP13.14□□□□□ -0.31
UBE3B-204ENST00000449510 MGRN1O60291 552 aa13.14□□□□□ -0.31
UBE3B-204ENST00000449510 STAMBPO95630 424 aa13.14□□□□□ -0.31
UBE3B-204ENST00000449510 RRM1P23921 792 aa13.14□□□□□ -0.31
UBE3B-204ENST00000449510 TNFRSF8P28908 595 aa13.14□□□□□ -0.31
UBE3B-204ENST00000449510 ARL1P40616 181 aaPredicted RBP13.14□□□□□ -0.31
UBE3B-204ENST00000449510 PSEN1P49768 467 aa13.14□□□□□ -0.31
UBE3B-204ENST00000449510 NPEPPSP55786 919 aa13.14□□□□□ -0.31
UBE3B-204ENST00000449510 DLG4P78352 724 aa13.14□□□□□ -0.31
UBE3B-204ENST00000449510 DMP1Q13316 513 aaPredicted RBP13.14□□□□□ -0.31
UBE3B-204ENST00000449510 KPNB1Q14974 876 aaKnown RBP13.14□□□□□ -0.31
UBE3B-204ENST00000449510 DUPD1Q68J44 220 aa13.14□□□□□ -0.31
UBE3B-204ENST00000449510 FAM228AQ86W67 206 aa13.14□□□□□ -0.31
UBE3B-204ENST00000449510 CCDC22O60826 627 aa13.13□□□□□ -0.31
UBE3B-204ENST00000449510 KRT36O76013 467 aa13.13□□□□□ -0.31
UBE3B-204ENST00000449510 STK10O94804 968 aaKnown RBP13.13□□□□□ -0.31
UBE3B-204ENST00000449510 FOSP01100 380 aaPredicted RBP13.13□□□□□ -0.31
UBE3B-204ENST00000449510 ETS1P14921 441 aa13.13□□□□□ -0.31
UBE3B-204ENST00000449510 CALB2P22676 271 aa13.13□□□□□ -0.31
UBE3B-204ENST00000449510 STAT4Q14765 748 aa13.13□□□□□ -0.31
UBE3B-204ENST00000449510 FAXCQ5TGI0 409 aa13.13□□□□□ -0.31
UBE3B-204ENST00000449510 HAUS6Q7Z4H7 955 aa13.13□□□□□ -0.31
UBE3B-204ENST00000449510 ZBTB33Q86T24 672 aa13.13□□□□□ -0.31
UBE3B-204ENST00000449510 ST13P4Q8IZP2 240 aaPredicted RBP13.13□□□□□ -0.31
UBE3B-204ENST00000449510 SCG3Q8WXD2 468 aaKnown RBP13.13□□□□□ -0.31
UBE3B-204ENST00000449510 SERPINB12Q96P63 405 aa13.13□□□□□ -0.31
UBE3B-204ENST00000449510 PACSIN3Q9UKS6 424 aa13.13□□□□□ -0.31
UBE3B-204ENST00000449510 SPATA31D1Q6ZQQ2 1576 aa13.13□□□□□ -0.31
UBE3B-204ENST00000449510 SPECC1L-ADORA2AF8WAN1 911 aa13.13□□□□□ -0.31
UBE3B-204ENST00000449510 SSTR1P30872 391 aa13.13□□□□□ -0.31
UBE3B-204ENST00000449510 EPHA7Q15375 998 aa13.13□□□□□ -0.31
UBE3B-204ENST00000449510 KCNT1Q5JUK3 1230 aa13.13□□□□□ -0.31
UBE3B-204ENST00000449510 LGSNQ5TDP6 509 aa13.13□□□□□ -0.31
UBE3B-204ENST00000449510 SYDE2Q5VT97 1194 aa13.13□□□□□ -0.31
UBE3B-204ENST00000449510 ARHGEF19Q8IW93 802 aa13.13□□□□□ -0.31
UBE3B-204ENST00000449510 PAF1Q8N7H5 531 aa13.13□□□□□ -0.31
UBE3B-204ENST00000449510 ZSWIM2Q8NEG5 633 aa13.13□□□□□ -0.31
UBE3B-204ENST00000449510 TBC1D22AQ8WUA7 517 aa13.13□□□□□ -0.31
UBE3B-204ENST00000449510 SEPT10Q9P0V9 454 aa13.13□□□□□ -0.31
UBE3B-204ENST00000449510 SAE1Q9UBE0 346 aaPredicted RBP13.13□□□□□ -0.31
UBE3B-204ENST00000449510 ANGPTL2Q9UKU9 493 aa13.13□□□□□ -0.31
UBE3B-204ENST00000449510 ZMYND8Q9ULU4 1186 aaPredicted RBP13.13□□□□□ -0.31
UBE3B-204ENST00000449510 WDR64B1ANS9 1081 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 NOP56O00567 594 aaKnown RBP13.12□□□□□ -0.31
UBE3B-204ENST00000449510 HNRNPCP07910 306 aaKnown RBP eCLIP13.12□□□□□ -0.31
UBE3B-204ENST00000449510 MMP13P45452 471 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 ACOT2P49753 483 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 CYTH1Q15438 398 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 SEZ6Q53EL9 994 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 CBWD2Q8IUF1 395 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 MTBPQ96DY7 904 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 MTMR9Q96QG7 549 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 CSRNP1Q96S65 589 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 RNPEPL1Q9HAU8 725 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 DENND3A2RUS2 1198 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 STAM2O75886 525 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 EYA4O95677 639 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 DESP17661 470 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 RPA1P27694 616 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 SERPINB3P29508 390 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 VHLP40337 213 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 RRP1BQ14684 758 aaKnown RBP13.12□□□□□ -0.31
UBE3B-204ENST00000449510 TRIP10Q15642 601 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 HIF1AQ16665 826 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 ATP13A4Q4VNC1 1196 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 C6orf89Q6UWU4 347 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 EFCAB3Q8N7B9 438 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 DAGLBQ8NCG7 672 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 STK32AQ8WU08 396 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 PPWD1Q96BP3 646 aaKnown RBP13.12□□□□□ -0.31
UBE3B-204ENST00000449510 GRAMD1AQ96CP6 724 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 TMEM121Q9BTD3 319 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 APOL6Q9BWW8 343 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 ROPN1BQ9BZX4 212 aaPredicted RBP13.12□□□□□ -0.31
UBE3B-204ENST00000449510 ROPN1Q9HAT0 212 aaPredicted RBP13.12□□□□□ -0.31
UBE3B-204ENST00000449510 TNS3Q68CZ2 1445 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 IPO5O00410 1097 aaKnown RBP13.12□□□□□ -0.31
UBE3B-204ENST00000449510 MX2P20592 715 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 ADRA1DP25100 572 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 RPA3P35244 121 aaPredicted RBP13.12□□□□□ -0.31
UBE3B-204ENST00000449510 TFAMQ00059 246 aaKnown RBP13.12□□□□□ -0.31
UBE3B-204ENST00000449510 SEMA3FQ13275 785 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 SH2D4BQ5SQS7 431 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 TTC27Q6P3X3 843 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 FAM196AQ6ZSG2 479 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 LRRC6Q86X45 466 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 KCTD6Q8NC69 237 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 B4GALNT2Q8NHY0 566 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 MORC4Q8TE76 937 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 RBM17Q96I25 401 aaKnown RBP13.12□□□□□ -0.31
UBE3B-204ENST00000449510 PPP1R16BQ96T49 567 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 HSPBP1Q9NZL4 362 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 CCPG1Q9ULG6 757 aa13.12□□□□□ -0.31
UBE3B-204ENST00000449510 SPDYE5A6NIY4 337 aa13.11□□□□□ -0.31
UBE3B-204ENST00000449510 MSH4O15457 936 aa13.11□□□□□ -0.31
UBE3B-204ENST00000449510 POLGP54098 1239 aaPredicted RBP13.11□□□□□ -0.31
UBE3B-204ENST00000449510 ASTE1Q2TB18 679 aaPredicted RBP13.11□□□□□ -0.31
UBE3B-204ENST00000449510 MAP7D1Q3KQU3 841 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms