RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 RIN2Q8WYP3 895 aaPredicted RBP13.91□□□□□ -0.18
PRPF40A-203ENST00000448428 C18orf25Q96B23 403 aaPredicted RBP13.91□□□□□ -0.18
PRPF40A-203ENST00000448428 DHX58Q96C10 678 aa13.91□□□□□ -0.18
PRPF40A-203ENST00000448428 UROC1Q96N76 676 aa13.91□□□□□ -0.18
PRPF40A-203ENST00000448428 MRPL44Q9H9J2 332 aaKnown RBP13.91□□□□□ -0.18
PRPF40A-203ENST00000448428 SLC38A7Q9NVC3 462 aa13.91□□□□□ -0.18
PRPF40A-203ENST00000448428 PANK4Q9NVE7 773 aa13.91□□□□□ -0.18
PRPF40A-203ENST00000448428 KBTBD4Q9NVX7 518 aa13.91□□□□□ -0.18
PRPF40A-203ENST00000448428 SEL1LQ9UBV2 794 aa13.91□□□□□ -0.18
PRPF40A-203ENST00000448428 CDH22Q9UJ99 828 aa13.91□□□□□ -0.18
PRPF40A-203ENST00000448428 SF3B1O75533 1304 aaKnown RBP eCLIP13.9□□□□□ -0.184e-7■■■■■ 86.2
PRPF40A-203ENST00000448428 A0A0B4J269 797 aa13.9□□□□□ -0.18
PRPF40A-203ENST00000448428 TTC26A0AVF1 554 aa13.9□□□□□ -0.18
PRPF40A-203ENST00000448428 FRMD3A2A2Y4 597 aa13.9□□□□□ -0.18
PRPF40A-203ENST00000448428 TISP43B9A030 160 aa13.9□□□□□ -0.18
PRPF40A-203ENST00000448428 TMEM189-UBE2V1I3L0A0 370 aa13.9□□□□□ -0.18
PRPF40A-203ENST00000448428 OGTO15294 1046 aa13.9□□□□□ -0.18
PRPF40A-203ENST00000448428 POLR2DO15514 142 aaKnown RBP13.9□□□□□ -0.18
PRPF40A-203ENST00000448428 FAM189A1O60320 539 aa13.9□□□□□ -0.18
PRPF40A-203ENST00000448428 PPP1R37O75864 691 aa13.9□□□□□ -0.18
PRPF40A-203ENST00000448428 CXCL8P10145 99 aa13.9□□□□□ -0.18
PRPF40A-203ENST00000448428 SPAG1Q07617 926 aa13.9□□□□□ -0.18
PRPF40A-203ENST00000448428 KCNA1Q09470 495 aa13.9□□□□□ -0.18
PRPF40A-203ENST00000448428 HERC4Q5GLZ8 1057 aaPredicted RBP13.9□□□□□ -0.18
PRPF40A-203ENST00000448428 RTP2Q5QGT7 225 aa13.9□□□□□ -0.18
PRPF40A-203ENST00000448428 ZBTB41Q5SVQ8 909 aa13.9□□□□□ -0.18
PRPF40A-203ENST00000448428 RARS2Q5T160 578 aaKnown RBP13.9□□□□□ -0.18
PRPF40A-203ENST00000448428 RESP18Q5W5W9 173 aa13.9□□□□□ -0.18
PRPF40A-203ENST00000448428 CEP57Q86XR8 500 aa13.9□□□□□ -0.18
PRPF40A-203ENST00000448428 IQUBQ8NA54 791 aa13.9□□□□□ -0.18
PRPF40A-203ENST00000448428 C3orf58Q8NDZ4 430 aa13.9□□□□□ -0.18
PRPF40A-203ENST00000448428 DDX27Q96GQ7 796 aaKnown RBP13.9□□□□□ -0.18
PRPF40A-203ENST00000448428 FBXL18Q96ME1 805 aa13.9□□□□□ -0.18
PRPF40A-203ENST00000448428 TTPALQ9BTX7 342 aa13.9□□□□□ -0.18
PRPF40A-203ENST00000448428 TNMDQ9H2S6 317 aa13.9□□□□□ -0.18
PRPF40A-203ENST00000448428 IKZF4Q9H2S9 585 aa13.9□□□□□ -0.18
PRPF40A-203ENST00000448428 ADAM7Q9H2U9 754 aa13.9□□□□□ -0.18
PRPF40A-203ENST00000448428 CUEDC2Q9H467 287 aa13.9□□□□□ -0.18
PRPF40A-203ENST00000448428 PLEKHA5Q9HAU0 1116 aa13.9□□□□□ -0.18
PRPF40A-203ENST00000448428 DZANK1Q9NVP4 752 aa13.9□□□□□ -0.18
PRPF40A-203ENST00000448428 FNIP2Q9P278 1114 aa13.9□□□□□ -0.18
PRPF40A-203ENST00000448428 ANK1P16157 1881 aa13.9□□□□□ -0.18
PRPF40A-203ENST00000448428 TTC28Q96AY4 2481 aa13.9□□□□□ -0.18
PRPF40A-203ENST00000448428 NCOR1O75376 2440 aa13.9□□□□□ -0.18
PRPF40A-203ENST00000448428 CUL9Q8IWT3 2517 aa13.89□□□□□ -0.19
PRPF40A-203ENST00000448428 LACTBL1A8MY62 500 aa13.89□□□□□ -0.19
PRPF40A-203ENST00000448428 I3L4J1 428 aa13.89□□□□□ -0.19
PRPF40A-203ENST00000448428 ADH1AP07327 375 aa13.89□□□□□ -0.19
PRPF40A-203ENST00000448428 WEE2P0C1S8 567 aa13.89□□□□□ -0.19
PRPF40A-203ENST00000448428 SPATA31D3P0C874 917 aa13.89□□□□□ -0.19
PRPF40A-203ENST00000448428 RPL17P18621 184 aaKnown RBP13.89□□□□□ -0.19
PRPF40A-203ENST00000448428 CASP5P51878 434 aa13.89□□□□□ -0.19
PRPF40A-203ENST00000448428 ITIH3Q06033 890 aa13.89□□□□□ -0.19
PRPF40A-203ENST00000448428 ELAVL2Q12926 359 aaKnown RBP13.89□□□□□ -0.19
PRPF40A-203ENST00000448428 CBX2Q14781 532 aaPredicted RBP13.89□□□□□ -0.19
PRPF40A-203ENST00000448428 ZBTB6Q15916 424 aa13.89□□□□□ -0.19
PRPF40A-203ENST00000448428 ENOX2Q16206 610 aaKnown RBP13.89□□□□□ -0.19
PRPF40A-203ENST00000448428 KYAT1Q16773 422 aa13.89□□□□□ -0.19
PRPF40A-203ENST00000448428 SLFN12LQ6IEE8 588 aa13.89□□□□□ -0.19
PRPF40A-203ENST00000448428 CES5AQ6NT32 575 aa13.89□□□□□ -0.19
PRPF40A-203ENST00000448428 SPATA31D4Q6ZUB0 917 aa13.89□□□□□ -0.19
PRPF40A-203ENST00000448428 PALB2Q86YC2 1186 aa13.89□□□□□ -0.19
PRPF40A-203ENST00000448428 GLYCTKQ8IVS8 523 aa13.89□□□□□ -0.19
PRPF40A-203ENST00000448428 TMEM130Q8N3G9 435 aa13.89□□□□□ -0.19
PRPF40A-203ENST00000448428 LNX1Q8TBB1 728 aaPredicted RBP13.89□□□□□ -0.19
PRPF40A-203ENST00000448428 FEZF2Q8TBJ5 459 aa13.89□□□□□ -0.19
PRPF40A-203ENST00000448428 LEO1Q8WVC0 666 aaPredicted RBP13.89□□□□□ -0.19
PRPF40A-203ENST00000448428 HVCN1Q96D96 273 aa13.89□□□□□ -0.19
PRPF40A-203ENST00000448428 POP1Q99575 1024 aaKnown RBP13.89□□□□□ -0.19
PRPF40A-203ENST00000448428 MSTO1Q9BUK6 570 aa13.89□□□□□ -0.19
PRPF40A-203ENST00000448428 PHF7Q9BWX1 381 aaPredicted RBP13.89□□□□□ -0.19
PRPF40A-203ENST00000448428 FGFBP2Q9BYJ0 223 aa13.89□□□□□ -0.19
PRPF40A-203ENST00000448428 LRRC27Q9C0I9 530 aa13.89□□□□□ -0.19
PRPF40A-203ENST00000448428 EPHX3Q9H6B9 360 aa13.89□□□□□ -0.19
PRPF40A-203ENST00000448428 OLFML3Q9NRN5 406 aa13.89□□□□□ -0.19
PRPF40A-203ENST00000448428 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.89□□□□□ -0.19
PRPF40A-203ENST00000448428 FAM13BQ9NYF5 915 aa13.89□□□□□ -0.19
PRPF40A-203ENST00000448428 STYXL1Q9Y6J8 313 aa13.89□□□□□ -0.19
PRPF40A-203ENST00000448428 C5orf42Q9H799 3197 aa13.89□□□□□ -0.19
PRPF40A-203ENST00000448428 C2orf16Q68DN1 1984 aa13.89□□□□□ -0.19
PRPF40A-203ENST00000448428 LOC730098B7Z3J9 87 aa13.88□□□□□ -0.19
PRPF40A-203ENST00000448428 PODXLO00592 558 aa13.88□□□□□ -0.19
PRPF40A-203ENST00000448428 GCNT3O95395 438 aa13.88□□□□□ -0.19
PRPF40A-203ENST00000448428 ADRB2P07550 413 aa13.88□□□□□ -0.19
PRPF40A-203ENST00000448428 MYBP10242 640 aa13.88□□□□□ -0.19
PRPF40A-203ENST00000448428 FGFR3P22607 806 aa13.88□□□□□ -0.19
PRPF40A-203ENST00000448428 RPL9P32969 192 aaKnown RBP13.88□□□□□ -0.19
PRPF40A-203ENST00000448428 BRCC3P46736 316 aa13.88□□□□□ -0.19
PRPF40A-203ENST00000448428 AMPD3Q01432 767 aa13.88□□□□□ -0.19
PRPF40A-203ENST00000448428 BECN1Q14457 450 aa13.88□□□□□ -0.19
PRPF40A-203ENST00000448428 ADALQ6DHV7 355 aa13.88□□□□□ -0.19
PRPF40A-203ENST00000448428 LILRA6Q6PI73 481 aa13.88□□□□□ -0.19
PRPF40A-203ENST00000448428 TMC5Q6UXY8 1006 aa13.88□□□□□ -0.19
PRPF40A-203ENST00000448428 CCDC65Q8IXS2 484 aa13.88□□□□□ -0.19
PRPF40A-203ENST00000448428 PIK3R5Q8WYR1 880 aa13.88□□□□□ -0.19
PRPF40A-203ENST00000448428 RPGRIP1Q96KN7 1286 aa13.88□□□□□ -0.19
PRPF40A-203ENST00000448428 ACCSQ96QU6 501 aa13.88□□□□□ -0.19
PRPF40A-203ENST00000448428 CLSTN3Q9BQT9 956 aa13.88□□□□□ -0.19
PRPF40A-203ENST00000448428 TRIM9Q9C026 710 aa13.88□□□□□ -0.19
PRPF40A-203ENST00000448428 RPF1Q9H9Y2 349 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms