RNA–Protein interactions for RNA: ENST00000447684.5

CNOT3-204, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2 BASIC

Gene CNOT3, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-204ENST00000447684 NAV1Q8NEY1 1877 aa17.03■□□□□ 0.32
CNOT3-204ENST00000447684 GSC2O15499 205 aa17.03■□□□□ 0.32
CNOT3-204ENST00000447684 RAD21O60216 631 aa17.03■□□□□ 0.32
CNOT3-204ENST00000447684 CCNFP41002 786 aa17.03■□□□□ 0.32
CNOT3-204ENST00000447684 CPA2P48052 419 aa17.03■□□□□ 0.32
CNOT3-204ENST00000447684 RTP1P59025 263 aa17.03■□□□□ 0.32
CNOT3-204ENST00000447684 ZNF564Q8TBZ8 553 aaPredicted RBP17.03■□□□□ 0.32
CNOT3-204ENST00000447684 SYT11Q9BT88 431 aa17.03■□□□□ 0.32
CNOT3-204ENST00000447684 SPATA16Q9BXB7 569 aa17.03■□□□□ 0.32
CNOT3-204ENST00000447684 HEMGNQ9BXL5 484 aa17.03■□□□□ 0.32
CNOT3-204ENST00000447684 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.03■□□□□ 0.32
CNOT3-204ENST00000447684 SLC16A3O15427 465 aaKnown RBP17.03■□□□□ 0.32
CNOT3-204ENST00000447684 PIK3CAP42336 1068 aa17.03■□□□□ 0.32
CNOT3-204ENST00000447684 MYL7Q01449 175 aa17.03■□□□□ 0.32
CNOT3-204ENST00000447684 DEUP1Q05D60 604 aa17.03■□□□□ 0.32
CNOT3-204ENST00000447684 STAT4Q14765 748 aa17.03■□□□□ 0.32
CNOT3-204ENST00000447684 PDK4Q16654 411 aa17.03■□□□□ 0.32
CNOT3-204ENST00000447684 WDR72Q3MJ13 1102 aa17.03■□□□□ 0.32
CNOT3-204ENST00000447684 SLC45A4Q5BKX6 768 aa17.03■□□□□ 0.32
CNOT3-204ENST00000447684 IZUMO2Q6UXV1 221 aa17.03■□□□□ 0.32
CNOT3-204ENST00000447684 ZNF365Q70YC5 407 aa17.03■□□□□ 0.32
CNOT3-204ENST00000447684 CATSPER3Q86XQ3 398 aa17.03■□□□□ 0.32
CNOT3-204ENST00000447684 CLEC10AQ8IUN9 316 aa17.03■□□□□ 0.32
CNOT3-204ENST00000447684 RFWD2Q8NHY2 731 aa17.03■□□□□ 0.32
CNOT3-204ENST00000447684 MXD3Q9BW11 206 aa17.03■□□□□ 0.32
CNOT3-204ENST00000447684 TRAIPQ9BWF2 469 aa17.03■□□□□ 0.32
CNOT3-204ENST00000447684 BHMT2Q9H2M3 363 aa17.03■□□□□ 0.32
CNOT3-204ENST00000447684 KRT82Q9NSB4 513 aa17.03■□□□□ 0.32
CNOT3-204ENST00000447684 DNAAF2Q9NVR5 837 aaKnown RBP17.03■□□□□ 0.32
CNOT3-204ENST00000447684 HEY2Q9UBP5 337 aa17.03■□□□□ 0.32
CNOT3-204ENST00000447684 GTPBP10A4D1E9 387 aaKnown RBP17.02■□□□□ 0.32
CNOT3-204ENST00000447684 TRAFD1O14545 582 aaPredicted RBP17.02■□□□□ 0.32
CNOT3-204ENST00000447684 SPATA31D3P0C874 917 aa17.02■□□□□ 0.32
CNOT3-204ENST00000447684 TROVE2P10155 538 aaKnown RBP eCLIP17.02■□□□□ 0.32
CNOT3-204ENST00000447684 RRM1P23921 792 aa17.02■□□□□ 0.32
CNOT3-204ENST00000447684 NMT1P30419 496 aaKnown RBP17.02■□□□□ 0.32
CNOT3-204ENST00000447684 CDK8P49336 464 aa17.02■□□□□ 0.32
CNOT3-204ENST00000447684 PLEKHG4Q58EX7 1191 aa17.02■□□□□ 0.32
CNOT3-204ENST00000447684 PHLDB3Q6NSJ2 640 aa17.02■□□□□ 0.32
CNOT3-204ENST00000447684 LVRNQ6Q4G3 990 aa17.02■□□□□ 0.32
CNOT3-204ENST00000447684 SPATA31D4Q6ZUB0 917 aa17.02■□□□□ 0.32
CNOT3-204ENST00000447684 TRABD2AQ86V40 505 aa17.02■□□□□ 0.32
CNOT3-204ENST00000447684 CELF1Q92879 486 aaKnown RBP17.02■□□□□ 0.32
CNOT3-204ENST00000447684 TTC1Q99614 292 aa17.02■□□□□ 0.32
CNOT3-204ENST00000447684 LRRC19Q9H756 370 aa17.02■□□□□ 0.32
CNOT3-204ENST00000447684 ATXN10Q9UBB4 475 aa17.02■□□□□ 0.32
CNOT3-204ENST00000447684 ABCA3Q99758 1704 aa17.02■□□□□ 0.32
CNOT3-204ENST00000447684 SNED1Q8TER0 1413 aa17.02■□□□□ 0.32
CNOT3-204ENST00000447684 USP17L15C9J2P7 530 aa17.02■□□□□ 0.31
CNOT3-204ENST00000447684 USP17L13C9JLJ4 530 aa17.02■□□□□ 0.31
CNOT3-204ENST00000447684 USP17L11C9JVI0 530 aa17.02■□□□□ 0.31
CNOT3-204ENST00000447684 USP17L18D6R9N7 530 aa17.02■□□□□ 0.31
CNOT3-204ENST00000447684 USP17L22D6RA61 530 aa17.02■□□□□ 0.31
CNOT3-204ENST00000447684 USP17L17D6RBQ6 530 aa17.02■□□□□ 0.31
CNOT3-204ENST00000447684 USP17L19D6RCP7 530 aa17.02■□□□□ 0.31
CNOT3-204ENST00000447684 USP17L20D6RJB6 530 aa17.02■□□□□ 0.31
CNOT3-204ENST00000447684 UBAP1LF5GYI3 381 aa17.02■□□□□ 0.31
CNOT3-204ENST00000447684 OPHN1O60890 802 aa17.02■□□□□ 0.31
CNOT3-204ENST00000447684 PSMC4P43686 418 aa17.02■□□□□ 0.31
CNOT3-204ENST00000447684 USP17L24Q0WX57 530 aa17.02■□□□□ 0.31
CNOT3-204ENST00000447684 SF3B3Q15393 1217 aaKnown RBP17.02■□□□□ 0.31
CNOT3-204ENST00000447684 USP17L6PQ6QN14 398 aa17.02■□□□□ 0.31
CNOT3-204ENST00000447684 PRR11Q96HE9 360 aaPredicted RBP17.02■□□□□ 0.31
CNOT3-204ENST00000447684 FAM161BQ96MY7 647 aa17.02■□□□□ 0.31
CNOT3-204ENST00000447684 FBXO6Q9NRD1 293 aaPredicted RBP17.02■□□□□ 0.31
CNOT3-204ENST00000447684 SLAIN2Q9P270 581 aa17.02■□□□□ 0.31
CNOT3-204ENST00000447684 PFDN1O60925 122 aa17.01■□□□□ 0.31
CNOT3-204ENST00000447684 FGFR1P11362 822 aa17.01■□□□□ 0.31
CNOT3-204ENST00000447684 SLC16A2P36021 539 aa17.01■□□□□ 0.31
CNOT3-204ENST00000447684 MYBPC3Q14896 1274 aa17.01■□□□□ 0.31
CNOT3-204ENST00000447684 CEP128Q6ZU80 1094 aa17.01■□□□□ 0.31
CNOT3-204ENST00000447684 PHLDB2Q86SQ0 1253 aa17.01■□□□□ 0.31
CNOT3-204ENST00000447684 MAML1Q92585 1016 aa17.01■□□□□ 0.31
CNOT3-204ENST00000447684 ZNF75CPQ92670 426 aaPredicted RBP17.01■□□□□ 0.31
CNOT3-204ENST00000447684 ZNF653Q96CK0 615 aa17.01■□□□□ 0.31
CNOT3-204ENST00000447684 RBM15Q96T37 977 aaKnown RBP eCLIP17.01■□□□□ 0.312e-6■■□□□ 12.2
CNOT3-204ENST00000447684 CENPKQ9BS16 269 aa17.01■□□□□ 0.31
CNOT3-204ENST00000447684 RIOX1Q9H6W3 641 aa17.01■□□□□ 0.31
CNOT3-204ENST00000447684 VPS37BQ9H9H4 285 aa17.01■□□□□ 0.31
CNOT3-204ENST00000447684 KIAA1586Q9HCI6 787 aa17.01■□□□□ 0.31
CNOT3-204ENST00000447684 SAYSD1Q9NPB0 183 aa17.01■□□□□ 0.31
CNOT3-204ENST00000447684 STX18Q9P2W9 335 aaKnown RBP17.01■□□□□ 0.31
CNOT3-204ENST00000447684 RPL26L1Q9UNX3 145 aaKnown RBP17.01■□□□□ 0.31
CNOT3-204ENST00000447684 MAGEB2O15479 319 aa17.01■□□□□ 0.31
CNOT3-204ENST00000447684 ZBED4O75132 1171 aa17.01■□□□□ 0.31
CNOT3-204ENST00000447684 POTEJP0CG39 1038 aa17.01■□□□□ 0.31
CNOT3-204ENST00000447684 ESRRAP11474 423 aaPredicted RBP17.01■□□□□ 0.31
CNOT3-204ENST00000447684 AMPD1P23109 780 aa17.01■□□□□ 0.31
CNOT3-204ENST00000447684 IZUMO3Q5VZ72 239 aa17.01■□□□□ 0.31
CNOT3-204ENST00000447684 RINLQ6ZS11 566 aa17.01■□□□□ 0.31
CNOT3-204ENST00000447684 GSTA5Q7RTV2 222 aa17.01■□□□□ 0.31
CNOT3-204ENST00000447684 ARHGAP18Q8N392 663 aa17.01■□□□□ 0.31
CNOT3-204ENST00000447684 SLC5A5Q92911 643 aa17.01■□□□□ 0.31
CNOT3-204ENST00000447684 C12orf65Q9H3J6 166 aaKnown RBP17.01■□□□□ 0.31
CNOT3-204ENST00000447684 TLE6Q9H808 572 aa17.01■□□□□ 0.31
CNOT3-204ENST00000447684 TMEM165Q9HC07 324 aa17.01■□□□□ 0.31
CNOT3-204ENST00000447684 LARSQ9P2J5 1176 aaKnown RBP17.01■□□□□ 0.31
CNOT3-204ENST00000447684 LNPEPQ9UIQ6 1025 aa17.01■□□□□ 0.31
CNOT3-204ENST00000447684 TGFB1I1O43294 461 aa17■□□□□ 0.31
CNOT3-204ENST00000447684 PLS3P13797 630 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms