RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 FAM81BQ96LP2 452 aa18.75■□□□□ 0.59
SMC6-206ENST00000446852 FZD8Q9H461 694 aa18.75■□□□□ 0.59
SMC6-206ENST00000446852 STIM2Q9P246 746 aa18.75■□□□□ 0.59
SMC6-206ENST00000446852 KAT6AQ92794 2004 aa18.74■□□□□ 0.59
SMC6-206ENST00000446852 UMODL1Q5DID0 1318 aa18.74■□□□□ 0.59
SMC6-206ENST00000446852 OGTO15294 1046 aa18.74■□□□□ 0.59
SMC6-206ENST00000446852 ACO1P21399 889 aaKnown RBP18.74■□□□□ 0.59
SMC6-206ENST00000446852 PROZP22891 400 aa18.74■□□□□ 0.59
SMC6-206ENST00000446852 EMID1Q96A84 441 aaPredicted RBP18.74■□□□□ 0.59
SMC6-206ENST00000446852 INO80B-WBP1J3KQ70 363 aa18.74■□□□□ 0.59
SMC6-206ENST00000446852 DDX3YO15523 660 aaKnown RBP18.74■□□□□ 0.59
SMC6-206ENST00000446852 IQCF3P0C7M6 154 aa18.74■□□□□ 0.59
SMC6-206ENST00000446852 MBTD1Q05BQ5 628 aa18.74■□□□□ 0.59
SMC6-206ENST00000446852 CUL2Q13617 745 aa18.74■□□□□ 0.59
SMC6-206ENST00000446852 TFDP1Q14186 410 aa18.74■□□□□ 0.59
SMC6-206ENST00000446852 DCAF12L1Q5VU92 463 aa18.74■□□□□ 0.59
SMC6-206ENST00000446852 TSHZ1Q6ZSZ6 1077 aa18.74■□□□□ 0.59
SMC6-206ENST00000446852 DPP9Q86TI2 863 aa18.74■□□□□ 0.59
SMC6-206ENST00000446852 MAML3Q96JK9 1138 aa18.74■□□□□ 0.59
SMC6-206ENST00000446852 PARK7Q99497 189 aaKnown RBP18.74■□□□□ 0.59
SMC6-206ENST00000446852 INO80BQ9C086 356 aaPredicted RBP18.74■□□□□ 0.59
SMC6-206ENST00000446852 PTPRHQ9HD43 1115 aa18.74■□□□□ 0.59
SMC6-206ENST00000446852 CPSF3Q9UKF6 684 aaKnown RBP18.74■□□□□ 0.59
SMC6-206ENST00000446852 NOC2LQ9Y3T9 749 aaKnown RBP18.74■□□□□ 0.59
SMC6-206ENST00000446852 NUB1Q9Y5A7 615 aa18.74■□□□□ 0.59
SMC6-206ENST00000446852 ZNF236Q9UL36 1845 aa18.73■□□□□ 0.59
SMC6-206ENST00000446852 ACKR2O00590 384 aa18.73■□□□□ 0.59
SMC6-206ENST00000446852 PTENP60484 403 aa18.73■□□□□ 0.59
SMC6-206ENST00000446852 ZNF484Q5JVG2 852 aa18.73■□□□□ 0.59
SMC6-206ENST00000446852 CDR2LQ86X02 465 aaPredicted RBP18.73■□□□□ 0.59
SMC6-206ENST00000446852 RASGEF1CQ8N431 466 aa18.73■□□□□ 0.59
SMC6-206ENST00000446852 RUBCNQ92622 972 aa18.73■□□□□ 0.59
SMC6-206ENST00000446852 KRT12Q99456 494 aa18.73■□□□□ 0.59
SMC6-206ENST00000446852 C16orf70Q9BSU1 422 aa18.73■□□□□ 0.59
SMC6-206ENST00000446852 SELENOOQ9BVL4 669 aa18.73■□□□□ 0.59
SMC6-206ENST00000446852 PGRMC1O00264 195 aaKnown RBP18.73■□□□□ 0.59
SMC6-206ENST00000446852 NOP14P78316 857 aaKnown RBP18.73■□□□□ 0.59
SMC6-206ENST00000446852 NCOA4Q13772 614 aa18.73■□□□□ 0.59
SMC6-206ENST00000446852 SMC1AQ14683 1233 aaKnown RBP18.73■□□□□ 0.59
SMC6-206ENST00000446852 FAM110CQ1W6H9 321 aa18.73■□□□□ 0.59
SMC6-206ENST00000446852 GLE1Q53GS7 698 aaKnown RBP18.73■□□□□ 0.59
SMC6-206ENST00000446852 EEF1DP3Q658K8 133 aa18.73■□□□□ 0.59
SMC6-206ENST00000446852 C11orf63Q6NUN7 778 aa18.73■□□□□ 0.59
SMC6-206ENST00000446852 WDR49Q8IV35 697 aa18.73■□□□□ 0.59
SMC6-206ENST00000446852 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.73■□□□□ 0.598e-7■□□□□ 11
SMC6-206ENST00000446852 CLTAP09496 248 aa18.72■□□□□ 0.59
SMC6-206ENST00000446852 CLEC16AQ2KHT3 1053 aa18.72■□□□□ 0.59
SMC6-206ENST00000446852 MAP9Q49MG5 647 aa18.72■□□□□ 0.59
SMC6-206ENST00000446852 ATF7IP2Q5U623 682 aa18.72■□□□□ 0.59
SMC6-206ENST00000446852 MPZL3Q6UWV2 235 aa18.72■□□□□ 0.59
SMC6-206ENST00000446852 LINC01465Q8N7H1 131 aa18.72■□□□□ 0.59
SMC6-206ENST00000446852 GDAP1L1Q96MZ0 367 aa18.72■□□□□ 0.59
SMC6-206ENST00000446852 MTMR12Q9C0I1 747 aa18.72■□□□□ 0.59
SMC6-206ENST00000446852 IFT122Q9HBG6 1241 aa18.72■□□□□ 0.59
SMC6-206ENST00000446852 PCDHB2Q9Y5E7 798 aa18.72■□□□□ 0.59
SMC6-206ENST00000446852 ALG6Q9Y672 507 aa18.72■□□□□ 0.59
SMC6-206ENST00000446852 PHACTR2O75167 634 aa18.72■□□□□ 0.59
SMC6-206ENST00000446852 MTA2O94776 668 aa18.72■□□□□ 0.59
SMC6-206ENST00000446852 CST3P01034 146 aaPredicted RBP18.72■□□□□ 0.59
SMC6-206ENST00000446852 CYP1A2P05177 515 aa18.72■□□□□ 0.59
SMC6-206ENST00000446852 GLI1P08151 1106 aa18.72■□□□□ 0.59
SMC6-206ENST00000446852 GRM1Q13255 1194 aa18.72■□□□□ 0.59
SMC6-206ENST00000446852 ZNF568Q3ZCX4 644 aa18.72■□□□□ 0.59
SMC6-206ENST00000446852 CEP120Q8N960 986 aa18.72■□□□□ 0.59
SMC6-206ENST00000446852 AENQ8WTP8 325 aaKnown RBP18.72■□□□□ 0.59
SMC6-206ENST00000446852 ZBTB9Q96C00 473 aa18.72■□□□□ 0.59
SMC6-206ENST00000446852 ZNF653Q96CK0 615 aa18.72■□□□□ 0.59
SMC6-206ENST00000446852 FAM212AQ96EL1 285 aa18.72■□□□□ 0.59
SMC6-206ENST00000446852 PLEKHA4Q9H4M7 779 aa18.72■□□□□ 0.59
SMC6-206ENST00000446852 GTF3C4Q9UKN8 822 aa18.72■□□□□ 0.59
SMC6-206ENST00000446852 ZSCAN5CA6NGD5 496 aaPredicted RBP18.71■□□□□ 0.59
SMC6-206ENST00000446852 SMPD1P17405 629 aa18.71■□□□□ 0.59
SMC6-206ENST00000446852 CST9Q5W186 159 aa18.71■□□□□ 0.59
SMC6-206ENST00000446852 ACAD10Q6JQN1 1059 aa18.71■□□□□ 0.59
SMC6-206ENST00000446852 PLEKHH3Q7Z736 793 aa18.71■□□□□ 0.59
SMC6-206ENST00000446852 PPP1R16BQ96T49 567 aa18.71■□□□□ 0.59
SMC6-206ENST00000446852 AP1M1Q9BXS5 423 aa18.71■□□□□ 0.59
SMC6-206ENST00000446852 TRPM7Q96QT4 1865 aa18.71■□□□□ 0.59
SMC6-206ENST00000446852 ASAP2O43150 1006 aa18.71■□□□□ 0.58
SMC6-206ENST00000446852 ADCY6O43306 1168 aa18.71■□□□□ 0.58
SMC6-206ENST00000446852 CSDE1O75534 798 aaKnown RBP18.71■□□□□ 0.58
SMC6-206ENST00000446852 UNGP13051 313 aaPredicted RBP18.71■□□□□ 0.58
SMC6-206ENST00000446852 KLHL7Q8IXQ5 586 aa18.71■□□□□ 0.58
SMC6-206ENST00000446852 THNSL1Q8IYQ7 743 aa18.71■□□□□ 0.58
SMC6-206ENST00000446852 NPLOC4Q8TAT6 608 aa18.71■□□□□ 0.58
SMC6-206ENST00000446852 ALG3Q92685 438 aa18.71■□□□□ 0.58
SMC6-206ENST00000446852 TINF2Q9BSI4 451 aa18.71■□□□□ 0.58
SMC6-206ENST00000446852 NUP85Q9BW27 656 aa18.71■□□□□ 0.58
SMC6-206ENST00000446852 NFKBIZQ9BYH8 718 aa18.71■□□□□ 0.58
SMC6-206ENST00000446852 TMEM110-MUSTN1A8MSY1 372 aa18.7■□□□□ 0.58
SMC6-206ENST00000446852 HOXC6P09630 235 aa18.7■□□□□ 0.58
SMC6-206ENST00000446852 OSTNP61366 133 aa18.7■□□□□ 0.58
SMC6-206ENST00000446852 TNNC1P63316 161 aa18.7■□□□□ 0.58
SMC6-206ENST00000446852 TMEM270Q6UE05 265 aa18.7■□□□□ 0.58
SMC6-206ENST00000446852 MSL3Q8N5Y2 521 aaKnown RBP18.7■□□□□ 0.58
SMC6-206ENST00000446852 CDT1Q9H211 546 aa18.7■□□□□ 0.58
SMC6-206ENST00000446852 H3BQF6 201 aa18.69■□□□□ 0.58
SMC6-206ENST00000446852 PPFIA4O75335 1185 aa18.69■□□□□ 0.58
SMC6-206ENST00000446852 HEXIM1O94992 359 aaKnown RBP18.69■□□□□ 0.58
SMC6-206ENST00000446852 ASS1P00966 412 aaKnown RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms