RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 NFIL3Q16649 462 aa15.16■□□□□ 0.02
ERCC3-203ENST00000445889 TMEM63BQ5T3F8 832 aa15.16■□□□□ 0.02
ERCC3-203ENST00000445889 SPOPLQ6IQ16 392 aa15.16■□□□□ 0.02
ERCC3-203ENST00000445889 CYFIP1Q7L576 1253 aa15.16■□□□□ 0.02
ERCC3-203ENST00000445889 GSTA5Q7RTV2 222 aa15.16■□□□□ 0.02
ERCC3-203ENST00000445889 HELQQ8TDG4 1101 aa15.16■□□□□ 0.02
ERCC3-203ENST00000445889 L3MBTL3Q96JM7 780 aaPredicted RBP15.16■□□□□ 0.02
ERCC3-203ENST00000445889 ACCSQ96QU6 501 aa15.16■□□□□ 0.02
ERCC3-203ENST00000445889 LRRC19Q9H756 370 aa15.16■□□□□ 0.02
ERCC3-203ENST00000445889 NOP53Q9NZM5 478 aaKnown RBP15.16■□□□□ 0.02
ERCC3-203ENST00000445889 RASA4BC9J798 803 aa15.16■□□□□ 0.02
ERCC3-203ENST00000445889 NFIBO00712 420 aa15.16■□□□□ 0.02
ERCC3-203ENST00000445889 RASA4O43374 803 aa15.16■□□□□ 0.02
ERCC3-203ENST00000445889 BANF1O75531 89 aa15.16■□□□□ 0.02
ERCC3-203ENST00000445889 KRT10P13645 584 aa15.16■□□□□ 0.02
ERCC3-203ENST00000445889 TARSP26639 723 aaKnown RBP15.16■□□□□ 0.02
ERCC3-203ENST00000445889 HADHBP55084 474 aaKnown RBP15.16■□□□□ 0.02
ERCC3-203ENST00000445889 FASTKD3Q14CZ7 662 aaKnown RBP15.16■□□□□ 0.02
ERCC3-203ENST00000445889 MFSD5Q6N075 450 aa15.16■□□□□ 0.02
ERCC3-203ENST00000445889 ZNF449Q6P9G9 518 aa15.16■□□□□ 0.02
ERCC3-203ENST00000445889 CRELD2Q6UXH1 353 aaPredicted RBP15.16■□□□□ 0.02
ERCC3-203ENST00000445889 TRMT10CQ7L0Y3 403 aaKnown RBP15.16■□□□□ 0.02
ERCC3-203ENST00000445889 LDHDQ86WU2 507 aa15.16■□□□□ 0.02
ERCC3-203ENST00000445889 CKAP2Q8WWK9 683 aa15.16■□□□□ 0.02
ERCC3-203ENST00000445889 TMEM109Q9BVC6 243 aa15.16■□□□□ 0.02
ERCC3-203ENST00000445889 PITPNM3Q9BZ71 974 aa15.16■□□□□ 0.02
ERCC3-203ENST00000445889 TRIM6Q9C030 488 aaPredicted RBP15.16■□□□□ 0.02
ERCC3-203ENST00000445889 C12orf65Q9H3J6 166 aaKnown RBP15.16■□□□□ 0.02
ERCC3-203ENST00000445889 ARL2BPQ9Y2Y0 163 aa15.16■□□□□ 0.02
ERCC3-203ENST00000445889 PIK3CDO00329 1044 aa15.15■□□□□ 0.02
ERCC3-203ENST00000445889 GRIN3BO60391 1043 aa15.15■□□□□ 0.02
ERCC3-203ENST00000445889 CYP1A2P05177 515 aa15.15■□□□□ 0.02
ERCC3-203ENST00000445889 MFAP3P55082 362 aa15.15■□□□□ 0.02
ERCC3-203ENST00000445889 RIPK1Q13546 671 aa15.15■□□□□ 0.02
ERCC3-203ENST00000445889 GALNTL6Q49A17 601 aa15.15■□□□□ 0.02
ERCC3-203ENST00000445889 RHBDF2Q6PJF5 856 aa15.15■□□□□ 0.02
ERCC3-203ENST00000445889 CROCCP2Q86T23 111 aa15.15■□□□□ 0.02
ERCC3-203ENST00000445889 SLC9A9Q8IVB4 645 aa15.15■□□□□ 0.02
ERCC3-203ENST00000445889 SPDL1Q96EA4 605 aa15.15■□□□□ 0.02
ERCC3-203ENST00000445889 SNF8Q96H20 258 aa15.15■□□□□ 0.02
ERCC3-203ENST00000445889 C10orf88Q9H8K7 445 aa15.15■□□□□ 0.02
ERCC3-203ENST00000445889 STK24Q9Y6E0 443 aa15.15■□□□□ 0.02
ERCC3-203ENST00000445889 GOLGA8SH3BPF8 625 aa15.15■□□□□ 0.02
ERCC3-203ENST00000445889 GOLGA8MH3BSY2 632 aa15.15■□□□□ 0.02
ERCC3-203ENST00000445889 VIL1P09327 827 aaKnown RBP15.15■□□□□ 0.02
ERCC3-203ENST00000445889 MYBL1P10243 752 aa15.15■□□□□ 0.02
ERCC3-203ENST00000445889 GBP1P32455 592 aa15.15■□□□□ 0.02
ERCC3-203ENST00000445889 PEX19P40855 299 aa15.15■□□□□ 0.02
ERCC3-203ENST00000445889 WDR4P57081 412 aaKnown RBP15.15■□□□□ 0.02
ERCC3-203ENST00000445889 CDR2Q01850 454 aa15.15■□□□□ 0.02
ERCC3-203ENST00000445889 SCARA3Q6AZY7 606 aa15.15■□□□□ 0.02
ERCC3-203ENST00000445889 TRIM68Q6AZZ1 485 aa15.15■□□□□ 0.02
ERCC3-203ENST00000445889 BZW1Q7L1Q6 419 aaKnown RBP15.15■□□□□ 0.02
ERCC3-203ENST00000445889 MICAL1Q8TDZ2 1067 aa15.15■□□□□ 0.02
ERCC3-203ENST00000445889 SHC3Q92529 594 aa15.15■□□□□ 0.02
ERCC3-203ENST00000445889 SERPINB12Q96P63 405 aa15.15■□□□□ 0.02
ERCC3-203ENST00000445889 ROPN1BQ9BZX4 212 aaPredicted RBP15.15■□□□□ 0.02
ERCC3-203ENST00000445889 ROPN1Q9HAT0 212 aaPredicted RBP15.15■□□□□ 0.02
ERCC3-203ENST00000445889 KLHL14Q9P2G3 628 aa15.15■□□□□ 0.02
ERCC3-203ENST00000445889 NKX1-2Q9UD57 310 aaPredicted RBP15.15■□□□□ 0.02
ERCC3-203ENST00000445889 HAO1Q9UJM8 370 aa15.15■□□□□ 0.02
ERCC3-203ENST00000445889 GTF3C4Q9UKN8 822 aa15.15■□□□□ 0.02
ERCC3-203ENST00000445889 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.15■□□□□ 0.02
ERCC3-203ENST00000445889 WDR91A4D1P6 747 aa15.14■□□□□ 0.01
ERCC3-203ENST00000445889 H0Y3Z8 333 aa15.14■□□□□ 0.01
ERCC3-203ENST00000445889 FSCN2O14926 492 aa15.14■□□□□ 0.01
ERCC3-203ENST00000445889 MYCLP12524 364 aaPredicted RBP15.14■□□□□ 0.01
ERCC3-203ENST00000445889 GZMAP12544 262 aa15.14■□□□□ 0.01
ERCC3-203ENST00000445889 TCF4P15884 667 aa15.14■□□□□ 0.01
ERCC3-203ENST00000445889 CNGA1P29973 690 aa15.14■□□□□ 0.01
ERCC3-203ENST00000445889 TAS2R40P59535 323 aa15.14■□□□□ 0.01
ERCC3-203ENST00000445889 ZNF568Q3ZCX4 644 aa15.14■□□□□ 0.01
ERCC3-203ENST00000445889 SV2AQ7L0J3 742 aa15.14■□□□□ 0.01
ERCC3-203ENST00000445889 ADAM22Q9P0K1 906 aa15.14■□□□□ 0.01
ERCC3-203ENST00000445889 TELO2Q9Y4R8 837 aa15.14■□□□□ 0.01
ERCC3-203ENST00000445889 ECE2O60344 883 aa15.14■□□□□ 0.01
ERCC3-203ENST00000445889 ATP9AO75110 1047 aa15.14■□□□□ 0.01
ERCC3-203ENST00000445889 MYCNP04198 464 aaPredicted RBP15.14■□□□□ 0.01
ERCC3-203ENST00000445889 PLS3P13797 630 aa15.14■□□□□ 0.01
ERCC3-203ENST00000445889 EIF2AK2P19525 551 aaKnown RBP15.14■□□□□ 0.01
ERCC3-203ENST00000445889 YWHABP31946 246 aaKnown RBP15.14■□□□□ 0.01
ERCC3-203ENST00000445889 XKR9Q5GH70 373 aa15.14■□□□□ 0.01
ERCC3-203ENST00000445889 ACAD10Q6JQN1 1059 aa15.14■□□□□ 0.01
ERCC3-203ENST00000445889 DDX1Q92499 740 aaKnown RBP15.14■□□□□ 0.01
ERCC3-203ENST00000445889 ERP27Q96DN0 273 aa15.14■□□□□ 0.01
ERCC3-203ENST00000445889 C11orf70Q9BRQ4 267 aa15.14■□□□□ 0.01
ERCC3-203ENST00000445889 DCLK3Q9C098 648 aa15.14■□□□□ 0.01
ERCC3-203ENST00000445889 FHDC1Q9C0D6 1143 aaPredicted RBP15.14■□□□□ 0.01
ERCC3-203ENST00000445889 TMEM206Q9H813 350 aa15.14■□□□□ 0.01
ERCC3-203ENST00000445889 NKIRAS1Q9NYS0 192 aa15.14■□□□□ 0.01
ERCC3-203ENST00000445889 ZMYND8Q9ULU4 1186 aaPredicted RBP15.14■□□□□ 0.01
ERCC3-203ENST00000445889 MROH7Q68CQ1 1323 aa15.14■□□□□ 0.01
ERCC3-203ENST00000445889 GGPS1O95749 300 aa15.13■□□□□ 0.01
ERCC3-203ENST00000445889 ITIH2P19823 946 aa15.13■□□□□ 0.01
ERCC3-203ENST00000445889 TAC1P20366 129 aa15.13■□□□□ 0.01
ERCC3-203ENST00000445889 AOC3Q16853 763 aa15.13■□□□□ 0.01
ERCC3-203ENST00000445889 DACT2Q5SW24 774 aa15.13■□□□□ 0.01
ERCC3-203ENST00000445889 IZUMO3Q5VZ72 239 aa15.13■□□□□ 0.01
ERCC3-203ENST00000445889 ZNF365Q70YC5 407 aa15.13■□□□□ 0.01
ERCC3-203ENST00000445889 PARD3BQ8TEW8 1205 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms