RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 USP41Q3LFD5 358 aa20.5■□□□□ 0.87
HDAC4-203ENST00000445704 HERC4Q5GLZ8 1057 aaPredicted RBP20.5■□□□□ 0.87
HDAC4-203ENST00000445704 RTP2Q5QGT7 225 aa20.5■□□□□ 0.87
HDAC4-203ENST00000445704 IQUBQ8NA54 791 aa20.5■□□□□ 0.87
HDAC4-203ENST00000445704 FEZF2Q8TBJ5 459 aa20.5■□□□□ 0.87
HDAC4-203ENST00000445704 LEO1Q8WVC0 666 aaPredicted RBP20.5■□□□□ 0.87
HDAC4-203ENST00000445704 SUSD6Q92537 303 aa20.5■□□□□ 0.87
HDAC4-203ENST00000445704 CUEDC2Q9H467 287 aa20.5■□□□□ 0.87
HDAC4-203ENST00000445704 RXFP1Q9HBX9 757 aa20.5■□□□□ 0.87
HDAC4-203ENST00000445704 OLFML3Q9NRN5 406 aa20.5■□□□□ 0.87
HDAC4-203ENST00000445704 PANK4Q9NVE7 773 aa20.5■□□□□ 0.87
HDAC4-203ENST00000445704 TTC26A0AVF1 554 aa20.49■□□□□ 0.87
HDAC4-203ENST00000445704 OGTO15294 1046 aa20.49■□□□□ 0.87
HDAC4-203ENST00000445704 POLR2DO15514 142 aaKnown RBP20.49■□□□□ 0.87
HDAC4-203ENST00000445704 CLTAP09496 248 aa20.49■□□□□ 0.87
HDAC4-203ENST00000445704 ABCD1P33897 745 aa20.49■□□□□ 0.87
HDAC4-203ENST00000445704 KIAA1841Q6NSI8 718 aa20.49■□□□□ 0.87
HDAC4-203ENST00000445704 KANK3Q6NY19 840 aa20.49■□□□□ 0.87
HDAC4-203ENST00000445704 PRSS55Q6UWB4 352 aaPredicted RBP20.49■□□□□ 0.87
HDAC4-203ENST00000445704 ADHFE1Q8IWW8 467 aa20.49■□□□□ 0.87
HDAC4-203ENST00000445704 RIN2Q8WYP3 895 aaPredicted RBP20.49■□□□□ 0.87
HDAC4-203ENST00000445704 KHSRPQ92945 711 aaKnown RBP eCLIP20.49■□□□□ 0.87
HDAC4-203ENST00000445704 HVCN1Q96D96 273 aa20.49■□□□□ 0.87
HDAC4-203ENST00000445704 UROC1Q96N76 676 aa20.49■□□□□ 0.87
HDAC4-203ENST00000445704 MSTO1Q9BUK6 570 aa20.49■□□□□ 0.87
HDAC4-203ENST00000445704 TRIM9Q9C026 710 aa20.49■□□□□ 0.87
HDAC4-203ENST00000445704 SLC38A7Q9NVC3 462 aa20.49■□□□□ 0.87
HDAC4-203ENST00000445704 FAM13BQ9NYF5 915 aa20.49■□□□□ 0.87
HDAC4-203ENST00000445704 PRKAG3Q9UGI9 489 aa20.49■□□□□ 0.87
HDAC4-203ENST00000445704 SSX2IPQ9Y2D8 614 aa20.49■□□□□ 0.87
HDAC4-203ENST00000445704 PLXNA3P51805 1871 aa20.49■□□□□ 0.87
HDAC4-203ENST00000445704 B3GAT3O94766 335 aa20.48■□□□□ 0.87
HDAC4-203ENST00000445704 GCNT3O95395 438 aa20.48■□□□□ 0.87
HDAC4-203ENST00000445704 HOXB8P17481 243 aaPredicted RBP20.48■□□□□ 0.87
HDAC4-203ENST00000445704 RPL17P18621 184 aaKnown RBP20.48■□□□□ 0.87
HDAC4-203ENST00000445704 CASP1P29466 404 aa20.48■□□□□ 0.87
HDAC4-203ENST00000445704 KRT85P78386 507 aa20.48■□□□□ 0.87
HDAC4-203ENST00000445704 SPAG1Q07617 926 aa20.48■□□□□ 0.87
HDAC4-203ENST00000445704 ENOX2Q16206 610 aaKnown RBP20.48■□□□□ 0.87
HDAC4-203ENST00000445704 L1TD1Q5T7N2 865 aaKnown RBP20.48■□□□□ 0.87
HDAC4-203ENST00000445704 FAM171A1Q5VUB5 890 aa20.48■□□□□ 0.87
HDAC4-203ENST00000445704 DCLRE1AQ6PJP8 1040 aa20.48■□□□□ 0.87
HDAC4-203ENST00000445704 PPFIBP1Q86W92 1011 aa20.48■□□□□ 0.87
HDAC4-203ENST00000445704 GJD3Q8N144 294 aa20.48■□□□□ 0.87
HDAC4-203ENST00000445704 C12orf76Q8N812 135 aaPredicted RBP20.48■□□□□ 0.87
HDAC4-203ENST00000445704 HPS3Q969F9 1004 aa20.48■□□□□ 0.87
HDAC4-203ENST00000445704 SPATA32Q96LK8 384 aa20.48■□□□□ 0.87
HDAC4-203ENST00000445704 TUBGCP4Q9UGJ1 667 aa20.48■□□□□ 0.87
HDAC4-203ENST00000445704 STYXL1Q9Y6J8 313 aa20.48■□□□□ 0.87
HDAC4-203ENST00000445704 VWA8A3KMH1 1905 aa20.48■□□□□ 0.87
HDAC4-203ENST00000445704 C19orf67A6NJJ6 358 aa20.47■□□□□ 0.87
HDAC4-203ENST00000445704 PODXLO00592 558 aa20.47■□□□□ 0.87
HDAC4-203ENST00000445704 ADH1AP07327 375 aa20.47■□□□□ 0.87
HDAC4-203ENST00000445704 BRCC3P46736 316 aa20.47■□□□□ 0.87
HDAC4-203ENST00000445704 CEP57Q86XR8 500 aa20.47■□□□□ 0.87
HDAC4-203ENST00000445704 CCDC65Q8IXS2 484 aa20.47■□□□□ 0.87
HDAC4-203ENST00000445704 GLIS3Q8NEA6 775 aa20.47■□□□□ 0.87
HDAC4-203ENST00000445704 FBXL18Q96ME1 805 aa20.47■□□□□ 0.87
HDAC4-203ENST00000445704 PLEKHA5Q9HAU0 1116 aa20.47■□□□□ 0.87
HDAC4-203ENST00000445704 DZANK1Q9NVP4 752 aa20.47■□□□□ 0.87
HDAC4-203ENST00000445704 CPSF3Q9UKF6 684 aaKnown RBP20.47■□□□□ 0.87
HDAC4-203ENST00000445704 KCNH3Q9ULD8 1083 aa20.47■□□□□ 0.87
HDAC4-203ENST00000445704 LACTBL1A8MY62 500 aa20.46■□□□□ 0.87
HDAC4-203ENST00000445704 I3L4J1 428 aa20.46■□□□□ 0.87
HDAC4-203ENST00000445704 WEE2P0C1S8 567 aa20.46■□□□□ 0.87
HDAC4-203ENST00000445704 ADSSP30520 456 aa20.46■□□□□ 0.87
HDAC4-203ENST00000445704 SSTR3P32745 418 aaPredicted RBP20.46■□□□□ 0.87
HDAC4-203ENST00000445704 ACOT2P49753 483 aa20.46■□□□□ 0.87
HDAC4-203ENST00000445704 KYAT1Q16773 422 aa20.46■□□□□ 0.87
HDAC4-203ENST00000445704 TPRNQ4KMQ1 711 aa20.46■□□□□ 0.87
HDAC4-203ENST00000445704 RARS2Q5T160 578 aaKnown RBP20.46■□□□□ 0.87
HDAC4-203ENST00000445704 CNNM4Q6P4Q7 775 aa20.46■□□□□ 0.87
HDAC4-203ENST00000445704 GLYCTKQ8IVS8 523 aa20.46■□□□□ 0.87
HDAC4-203ENST00000445704 GPR65Q8IYL9 337 aa20.46■□□□□ 0.87
HDAC4-203ENST00000445704 PIK3R5Q8WYR1 880 aa20.46■□□□□ 0.87
HDAC4-203ENST00000445704 ACCSQ96QU6 501 aa20.46■□□□□ 0.87
HDAC4-203ENST00000445704 C7orf25Q9BPX7 421 aa20.46■□□□□ 0.87
HDAC4-203ENST00000445704 TTPALQ9BTX7 342 aa20.46■□□□□ 0.87
HDAC4-203ENST00000445704 LRRC27Q9C0I9 530 aa20.46■□□□□ 0.87
HDAC4-203ENST00000445704 FNIP2Q9P278 1114 aa20.46■□□□□ 0.87
HDAC4-203ENST00000445704 ADRB2P07550 413 aa20.45■□□□□ 0.86
HDAC4-203ENST00000445704 PFKFB1P16118 471 aa20.45■□□□□ 0.86
HDAC4-203ENST00000445704 FGFR3P22607 806 aa20.45■□□□□ 0.86
HDAC4-203ENST00000445704 ASIC1P78348 528 aa20.45■□□□□ 0.86
HDAC4-203ENST00000445704 AMPD3Q01432 767 aa20.45■□□□□ 0.86
HDAC4-203ENST00000445704 PPP2R3AQ06190 1150 aa20.45■□□□□ 0.86
HDAC4-203ENST00000445704 ELAVL2Q12926 359 aaKnown RBP20.45■□□□□ 0.86
HDAC4-203ENST00000445704 CBX2Q14781 532 aaPredicted RBP20.45■□□□□ 0.86
HDAC4-203ENST00000445704 ZBTB6Q15916 424 aa20.45■□□□□ 0.86
HDAC4-203ENST00000445704 ADALQ6DHV7 355 aa20.45■□□□□ 0.86
HDAC4-203ENST00000445704 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.45■□□□□ 0.86
HDAC4-203ENST00000445704 GRAMD1CQ8IYS0 662 aa20.45■□□□□ 0.86
HDAC4-203ENST00000445704 LNX1Q8TBB1 728 aaPredicted RBP20.45■□□□□ 0.86
HDAC4-203ENST00000445704 KIF12Q96FN5 646 aa20.45■□□□□ 0.86
HDAC4-203ENST00000445704 DDX27Q96GQ7 796 aaKnown RBP20.45■□□□□ 0.86
HDAC4-203ENST00000445704 BLZF1Q9H2G9 400 aa20.45■□□□□ 0.86
HDAC4-203ENST00000445704 ADAM7Q9H2U9 754 aa20.45■□□□□ 0.86
HDAC4-203ENST00000445704 RPF1Q9H9Y2 349 aaKnown RBP20.45■□□□□ 0.86
HDAC4-203ENST00000445704 MAGEF1Q9HAY2 307 aa20.45■□□□□ 0.86
HDAC4-203ENST00000445704 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms