RNA–Protein interactions for RNA: ENST00000445623.1

TIMP1-204, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2

Gene TIMP1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-204ENST00000445623 TMEM191BP0C7N4 346 aa14.27□□□□□ -0.13
TIMP1-204ENST00000445623 CDK11BP21127 795 aaKnown RBP14.27□□□□□ -0.13
TIMP1-204ENST00000445623 EEF1GP26641 437 aaKnown RBP14.27□□□□□ -0.13
TIMP1-204ENST00000445623 MARSP56192 900 aaKnown RBP14.27□□□□□ -0.13
TIMP1-204ENST00000445623 BTG3Q14201 252 aaPredicted RBP14.27□□□□□ -0.13
TIMP1-204ENST00000445623 CHRDL2Q6WN34 429 aa14.27□□□□□ -0.13
TIMP1-204ENST00000445623 DHX40Q8IX18 779 aaKnown RBP14.27□□□□□ -0.13
TIMP1-204ENST00000445623 BEST2Q8NFU1 509 aa14.27□□□□□ -0.13
TIMP1-204ENST00000445623 PARD3BQ8TEW8 1205 aa14.27□□□□□ -0.13
TIMP1-204ENST00000445623 ZNF689Q96CS4 500 aaPredicted RBP14.27□□□□□ -0.13
TIMP1-204ENST00000445623 ANKRD36BP1Q96IX9 119 aa14.27□□□□□ -0.13
TIMP1-204ENST00000445623 CASD1Q96PB1 797 aa14.27□□□□□ -0.13
TIMP1-204ENST00000445623 PDE11AQ9HCR9 933 aa14.27□□□□□ -0.13
TIMP1-204ENST00000445623 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.26□□□□□ -0.13
TIMP1-204ENST00000445623 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.26□□□□□ -0.13
TIMP1-204ENST00000445623 A0A1W2PPC1 479 aa14.26□□□□□ -0.13
TIMP1-204ENST00000445623 KCNJ18B7U540 433 aa14.26□□□□□ -0.13
TIMP1-204ENST00000445623 PTGESO14684 152 aa14.26□□□□□ -0.13
TIMP1-204ENST00000445623 POMCP01189 267 aa14.26□□□□□ -0.13
TIMP1-204ENST00000445623 TNNC2P02585 160 aa14.26□□□□□ -0.13
TIMP1-204ENST00000445623 NFICP08651 508 aa14.26□□□□□ -0.13
TIMP1-204ENST00000445623 CYP3A5P20815 502 aa14.26□□□□□ -0.13
TIMP1-204ENST00000445623 MTIF2P46199 727 aaKnown RBP14.26□□□□□ -0.13
TIMP1-204ENST00000445623 HTRA4P83105 476 aaPredicted RBP14.26□□□□□ -0.13
TIMP1-204ENST00000445623 TFAMQ00059 246 aaKnown RBP14.26□□□□□ -0.13
TIMP1-204ENST00000445623 KCNJ12Q14500 433 aa14.26□□□□□ -0.13
TIMP1-204ENST00000445623 NCAPHQ15003 741 aa14.26□□□□□ -0.13
TIMP1-204ENST00000445623 IQCB1Q15051 598 aa14.26□□□□□ -0.13
TIMP1-204ENST00000445623 DUOXA2Q1HG44 320 aa14.26□□□□□ -0.13
TIMP1-204ENST00000445623 PAN2Q504Q3 1202 aaKnown RBP14.26□□□□□ -0.13
TIMP1-204ENST00000445623 DCAF17Q5H9S7 520 aaPredicted RBP14.26□□□□□ -0.13
TIMP1-204ENST00000445623 GLRA4Q5JXX5 417 aa14.26□□□□□ -0.13
TIMP1-204ENST00000445623 TCERG1LQ5VWI1 586 aa14.26□□□□□ -0.13
TIMP1-204ENST00000445623 JADE1Q6IE81 842 aa14.26□□□□□ -0.13
TIMP1-204ENST00000445623 TMCO2Q7Z6W1 182 aaPredicted RBP14.26□□□□□ -0.13
TIMP1-204ENST00000445623 PPP1R10Q96QC0 940 aaKnown RBP14.26□□□□□ -0.13
TIMP1-204ENST00000445623 RC3H2Q9HBD1 1191 aaKnown RBP14.26□□□□□ -0.13
TIMP1-204ENST00000445623 SAMSN1Q9NSI8 373 aaKnown RBP14.26□□□□□ -0.13
TIMP1-204ENST00000445623 TBC1D13Q9NVG8 400 aa14.26□□□□□ -0.13
TIMP1-204ENST00000445623 FANCLQ9NW38 375 aa14.26□□□□□ -0.13
TIMP1-204ENST00000445623 R3HCC1Q9Y3T6 440 aaKnown RBP14.26□□□□□ -0.13
TIMP1-204ENST00000445623 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.26□□□□□ -0.13
TIMP1-204ENST00000445623 COL4A6Q14031 1691 aa14.26□□□□□ -0.13
TIMP1-204ENST00000445623 MEFVO15553 781 aaPredicted RBP14.25□□□□□ -0.13
TIMP1-204ENST00000445623 N4BP1O75113 896 aaKnown RBP14.25□□□□□ -0.13
TIMP1-204ENST00000445623 PRKCSHP14314 528 aaPredicted RBP14.25□□□□□ -0.13
TIMP1-204ENST00000445623 GTF2H1P32780 548 aa14.25□□□□□ -0.13
TIMP1-204ENST00000445623 GATMP50440 423 aa14.25□□□□□ -0.13
TIMP1-204ENST00000445623 TUSC3Q13454 348 aa14.25□□□□□ -0.13
TIMP1-204ENST00000445623 RAB30Q15771 203 aa14.25□□□□□ -0.13
TIMP1-204ENST00000445623 TCP11X2Q5H9J9 407 aa14.25□□□□□ -0.13
TIMP1-204ENST00000445623 SPOUT1Q5T280 376 aaKnown RBP14.25□□□□□ -0.13
TIMP1-204ENST00000445623 PRPF38BQ5VTL8 546 aaKnown RBP14.25□□□□□ -0.13
TIMP1-204ENST00000445623 CDKAL1Q5VV42 579 aa14.25□□□□□ -0.13
TIMP1-204ENST00000445623 LUZP1Q86V48 1076 aa14.25□□□□□ -0.13
TIMP1-204ENST00000445623 EFCAB13Q8IY85 973 aa14.25□□□□□ -0.13
TIMP1-204ENST00000445623 FIBCD1Q8N539 461 aa14.25□□□□□ -0.13
TIMP1-204ENST00000445623 GSTCDQ8NEC7 633 aa14.25□□□□□ -0.13
TIMP1-204ENST00000445623 BORCS6Q96GS4 357 aa14.25□□□□□ -0.13
TIMP1-204ENST00000445623 UROC1Q96N76 676 aa14.25□□□□□ -0.13
TIMP1-204ENST00000445623 ZMAT2Q96NC0 199 aaKnown RBP14.25□□□□□ -0.13
TIMP1-204ENST00000445623 AAASQ9NRG9 546 aa14.25□□□□□ -0.13
TIMP1-204ENST00000445623 INTS13Q9NVM9 706 aa14.25□□□□□ -0.13
TIMP1-204ENST00000445623 PCDHA11Q9Y5I1 949 aa14.25□□□□□ -0.13
TIMP1-204ENST00000445623 LRRIQ3A6PVS8 624 aaPredicted RBP14.24□□□□□ -0.13
TIMP1-204ENST00000445623 LAG3P18627 525 aa14.24□□□□□ -0.13
TIMP1-204ENST00000445623 MCCD1P59942 119 aaPredicted RBP14.24□□□□□ -0.13
TIMP1-204ENST00000445623 CLDN10P78369 228 aa14.24□□□□□ -0.13
TIMP1-204ENST00000445623 CETN1Q12798 172 aa14.24□□□□□ -0.13
TIMP1-204ENST00000445623 MAN2A1Q16706 1144 aa14.24□□□□□ -0.13
TIMP1-204ENST00000445623 HSP90AA4PQ58FG1 418 aa14.24□□□□□ -0.13
TIMP1-204ENST00000445623 IRF2BP1Q8IU81 584 aa14.24□□□□□ -0.13
TIMP1-204ENST00000445623 TRIM59Q8IWR1 403 aa14.24□□□□□ -0.13
TIMP1-204ENST00000445623 SLC35C1Q96A29 364 aa14.24□□□□□ -0.13
TIMP1-204ENST00000445623 DDX27Q96GQ7 796 aaKnown RBP14.24□□□□□ -0.13
TIMP1-204ENST00000445623 TMEM175Q9BSA9 504 aa14.24□□□□□ -0.13
TIMP1-204ENST00000445623 MTMR12Q9C0I1 747 aa14.24□□□□□ -0.13
TIMP1-204ENST00000445623 PRO3102Q9H379 93 aa14.24□□□□□ -0.13
TIMP1-204ENST00000445623 MIOSQ9NXC5 875 aa14.24□□□□□ -0.13
TIMP1-204ENST00000445623 MSRAQ9UJ68 235 aa14.24□□□□□ -0.13
TIMP1-204ENST00000445623 ITGA11Q9UKX5 1188 aa14.24□□□□□ -0.13
TIMP1-204ENST00000445623 PLAGL2Q9UPG8 496 aa14.24□□□□□ -0.13
TIMP1-204ENST00000445623 RWDD3Q9Y3V2 267 aa14.24□□□□□ -0.13
TIMP1-204ENST00000445623 TNRC18O15417 2968 aaPredicted RBP14.24□□□□□ -0.13
TIMP1-204ENST00000445623 GBF1Q92538 1859 aa14.23□□□□□ -0.13
TIMP1-204ENST00000445623 ZC3H11AO75152 810 aaKnown RBP eCLIP14.23□□□□□ -0.13
TIMP1-204ENST00000445623 PHACTR2O75167 634 aa14.23□□□□□ -0.13
TIMP1-204ENST00000445623 AFPP02771 609 aaKnown RBP14.23□□□□□ -0.13
TIMP1-204ENST00000445623 TRIM49P0CI25 452 aa14.23□□□□□ -0.13
TIMP1-204ENST00000445623 TRIM49CP0CI26 452 aa14.23□□□□□ -0.13
TIMP1-204ENST00000445623 ZNF18P17022 549 aa14.23□□□□□ -0.13
TIMP1-204ENST00000445623 RPL9P32969 192 aaKnown RBP14.23□□□□□ -0.13
TIMP1-204ENST00000445623 MXI1P50539 228 aa14.23□□□□□ -0.13
TIMP1-204ENST00000445623 AFF1P51825 1210 aaKnown RBP14.23□□□□□ -0.13
TIMP1-204ENST00000445623 WNT7BP56706 349 aa14.23□□□□□ -0.13
TIMP1-204ENST00000445623 DLG4P78352 724 aa14.23□□□□□ -0.13
TIMP1-204ENST00000445623 DSC1Q08554 894 aa14.23□□□□□ -0.13
TIMP1-204ENST00000445623 BIRC3Q13489 604 aa14.23□□□□□ -0.13
TIMP1-204ENST00000445623 ZBTB6Q15916 424 aa14.23□□□□□ -0.13
TIMP1-204ENST00000445623 LMBRD2Q68DH5 695 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms