RNA–Protein interactions for RNA: ENST00000445346.1

LINC02549-201, Transcript of long intergenic non-protein coding RNA 2549, humanhuman

TSL 1 (best) BASIC

Gene LINC02549, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02549-201ENST00000445346 RPS6KC1Q96S38 1066 aa8.87□□□□□ -0.99
LINC02549-201ENST00000445346 VN1R3Q9BXE9 311 aa8.87□□□□□ -0.99
LINC02549-201ENST00000445346 SLC26A6Q9BXS9 759 aa8.87□□□□□ -0.99
LINC02549-201ENST00000445346 SLKQ9H2G2 1235 aaPredicted RBP8.87□□□□□ -0.99
LINC02549-201ENST00000445346 TBC1D17Q9HA65 648 aa8.87□□□□□ -0.99
LINC02549-201ENST00000445346 WDR6Q9NNW5 1121 aaKnown RBP8.87□□□□□ -0.99
LINC02549-201ENST00000445346 UBN1Q9NPG3 1134 aa8.87□□□□□ -0.99
LINC02549-201ENST00000445346 AGPAT5Q9NUQ2 364 aa8.87□□□□□ -0.99
LINC02549-201ENST00000445346 VPS54Q9P1Q0 977 aa8.87□□□□□ -0.99
LINC02549-201ENST00000445346 PRG3Q9Y2Y8 225 aaPredicted RBP8.87□□□□□ -0.99
LINC02549-201ENST00000445346 SIT1Q9Y3P8 196 aa8.87□□□□□ -0.99
LINC02549-201ENST00000445346 CLUHO75153 1309 aa8.86□□□□□ -0.99
LINC02549-201ENST00000445346 CNTNAP2Q9UHC6 1331 aa8.86□□□□□ -0.99
LINC02549-201ENST00000445346 A0A1B0GTH6 734 aa8.86□□□□□ -0.99
LINC02549-201ENST00000445346 EML1O00423 815 aa8.86□□□□□ -0.99
LINC02549-201ENST00000445346 TEX28O15482 410 aa8.86□□□□□ -0.99
LINC02549-201ENST00000445346 DKC1O60832 514 aaKnown RBP eCLIP8.86□□□□□ -0.99
LINC02549-201ENST00000445346 MAFO75444 373 aaPredicted RBP8.86□□□□□ -0.99
LINC02549-201ENST00000445346 PSMD10O75832 226 aa8.86□□□□□ -0.99
LINC02549-201ENST00000445346 SPATA31D3P0C874 917 aa8.86□□□□□ -0.99
LINC02549-201ENST00000445346 ITGA4P13612 1032 aa8.86□□□□□ -0.99
LINC02549-201ENST00000445346 GLUD2P49448 558 aa8.86□□□□□ -0.99
LINC02549-201ENST00000445346 AFF1P51825 1210 aaKnown RBP8.86□□□□□ -0.99
LINC02549-201ENST00000445346 PSMC5P62195 406 aa8.86□□□□□ -0.99
LINC02549-201ENST00000445346 NCBP1Q09161 790 aaKnown RBP8.86□□□□□ -0.99
LINC02549-201ENST00000445346 PUM1Q14671 1186 aaKnown RBP eCLIP8.86□□□□□ -0.99
LINC02549-201ENST00000445346 Q4G0T1 1027 aa8.86□□□□□ -0.99
LINC02549-201ENST00000445346 SPATA31D4Q6ZUB0 917 aa8.86□□□□□ -0.99
LINC02549-201ENST00000445346 SRGAP1Q7Z6B7 1085 aa8.86□□□□□ -0.99
LINC02549-201ENST00000445346 PALB2Q86YC2 1186 aa8.86□□□□□ -0.99
LINC02549-201ENST00000445346 EXOC8Q8IYI6 725 aa8.86□□□□□ -0.99
LINC02549-201ENST00000445346 CNNM3Q8NE01 707 aa8.86□□□□□ -0.99
LINC02549-201ENST00000445346 GPR152Q8TDT2 470 aa8.86□□□□□ -0.99
LINC02549-201ENST00000445346 TBCKQ8TEA7 893 aa8.86□□□□□ -0.99
LINC02549-201ENST00000445346 PSPC1Q8WXF1 523 aaKnown RBP8.86□□□□□ -0.99
LINC02549-201ENST00000445346 BRF1Q92994 677 aa8.86□□□□□ -0.99
LINC02549-201ENST00000445346 CEP89Q96ST8 783 aa8.86□□□□□ -0.99
LINC02549-201ENST00000445346 HERC2P3Q9BVR0 1158 aa8.86□□□□□ -0.99
LINC02549-201ENST00000445346 C22orf23Q9BZE7 217 aa8.86□□□□□ -0.99
LINC02549-201ENST00000445346 NDFIP2Q9NV92 336 aa8.86□□□□□ -0.99
LINC02549-201ENST00000445346 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.86□□□□□ -0.99
LINC02549-201ENST00000445346 EPS15L1Q9UBC2 864 aa8.86□□□□□ -0.99
LINC02549-201ENST00000445346 COL4A3BPQ9Y5P4 624 aa8.86□□□□□ -0.99
LINC02549-201ENST00000445346 GVINP1Q7Z2Y8 2422 aa8.85□□□□□ -0.99
LINC02549-201ENST00000445346 GAS2O43903 313 aaKnown RBP8.85□□□□□ -0.99
LINC02549-201ENST00000445346 B4GALT3O60512 393 aa8.85□□□□□ -0.99
LINC02549-201ENST00000445346 N4BP1O75113 896 aaKnown RBP8.85□□□□□ -0.99
LINC02549-201ENST00000445346 RFPL2O75678 378 aa8.85□□□□□ -0.99
LINC02549-201ENST00000445346 ERLIN2O94905 339 aa8.85□□□□□ -0.99
LINC02549-201ENST00000445346 STBD1O95210 358 aa8.85□□□□□ -0.99
LINC02549-201ENST00000445346 SP9P0CG40 484 aa8.85□□□□□ -0.99
LINC02549-201ENST00000445346 CPA1P15085 419 aa8.85□□□□□ -0.99
LINC02549-201ENST00000445346 IRX6P78412 446 aaPredicted RBP8.85□□□□□ -0.99
LINC02549-201ENST00000445346 PLA2G4FQ68DD2 849 aa8.85□□□□□ -0.99
LINC02549-201ENST00000445346 DCLRE1AQ6PJP8 1040 aa8.85□□□□□ -0.99
LINC02549-201ENST00000445346 BLOC1S2Q6QNY1 142 aa8.85□□□□□ -0.99
LINC02549-201ENST00000445346 GET4Q7L5D6 327 aaPredicted RBP8.85□□□□□ -0.99
LINC02549-201ENST00000445346 TAS1R1Q7RTX1 841 aa8.85□□□□□ -0.99
LINC02549-201ENST00000445346 MRPL10Q7Z7H8 261 aaKnown RBP8.85□□□□□ -0.99
LINC02549-201ENST00000445346 GLYCTKQ8IVS8 523 aa8.85□□□□□ -0.99
LINC02549-201ENST00000445346 C1orf210Q8IVY1 113 aa8.85□□□□□ -0.99
LINC02549-201ENST00000445346 RUBCNQ92622 972 aa8.85□□□□□ -0.99
LINC02549-201ENST00000445346 TMEM143Q96AN5 459 aa8.85□□□□□ -0.99
LINC02549-201ENST00000445346 SHDQ96IW2 340 aa8.85□□□□□ -0.99
LINC02549-201ENST00000445346 CEP170P1Q96L14 293 aa8.85□□□□□ -0.99
LINC02549-201ENST00000445346 MYADMQ96S97 322 aa8.85□□□□□ -0.99
LINC02549-201ENST00000445346 COLEC11Q9BWP8 271 aa8.85□□□□□ -0.99
LINC02549-201ENST00000445346 RNF26Q9BY78 433 aaPredicted RBP8.85□□□□□ -0.99
LINC02549-201ENST00000445346 NT5C3AQ9H0P0 336 aa8.85□□□□□ -0.99
LINC02549-201ENST00000445346 NUCKS1Q9H1E3 243 aaKnown RBP8.85□□□□□ -0.99
LINC02549-201ENST00000445346 PLEKHA4Q9H4M7 779 aa8.85□□□□□ -0.99
LINC02549-201ENST00000445346 IFT122Q9HBG6 1241 aa8.85□□□□□ -0.99
LINC02549-201ENST00000445346 ARHGEF3Q9NR81 526 aa8.85□□□□□ -0.99
LINC02549-201ENST00000445346 EP300Q09472 2414 aaPredicted RBP8.85□□□□□ -0.99
LINC02549-201ENST00000445346 MED19A0JLT2 244 aaPredicted RBP8.84□□□□□ -0.99
LINC02549-201ENST00000445346 ASAP2O43150 1006 aa8.84□□□□□ -0.99
LINC02549-201ENST00000445346 EDIL3O43854 480 aa8.84□□□□□ -0.99
LINC02549-201ENST00000445346 MARCH6O60337 910 aa8.84□□□□□ -0.99
LINC02549-201ENST00000445346 TDP2O95551 362 aa8.84□□□□□ -0.99
LINC02549-201ENST00000445346 DMDP11532 3685 aa8.84□□□□□ -0.99
LINC02549-201ENST00000445346 LAMP2P13473 410 aa8.84□□□□□ -0.99
LINC02549-201ENST00000445346 NCLP19338 710 aaKnown RBP8.84□□□□□ -0.99
LINC02549-201ENST00000445346 QARSP47897 775 aaKnown RBP8.84□□□□□ -0.99
LINC02549-201ENST00000445346 ATP1A2P50993 1020 aa8.84□□□□□ -0.99
LINC02549-201ENST00000445346 NPEPPSP55786 919 aa8.84□□□□□ -0.99
LINC02549-201ENST00000445346 CCT2P78371 535 aaKnown RBP8.84□□□□□ -0.99
LINC02549-201ENST00000445346 LAMTOR4Q0VGL1 99 aa8.84□□□□□ -0.99
LINC02549-201ENST00000445346 KIAA0319Q5VV43 1072 aa8.84□□□□□ -0.99
LINC02549-201ENST00000445346 PHLDB3Q6NSJ2 640 aa8.84□□□□□ -0.99
LINC02549-201ENST00000445346 ANO5Q75V66 913 aa8.84□□□□□ -0.99
LINC02549-201ENST00000445346 COLGALT2Q8IYK4 626 aa8.84□□□□□ -0.99
LINC02549-201ENST00000445346 HACE1Q8IYU2 909 aa8.84□□□□□ -0.99
LINC02549-201ENST00000445346 RNF149Q8NC42 400 aa8.84□□□□□ -0.99
LINC02549-201ENST00000445346 ST13P5Q8NFI4 369 aaPredicted RBP8.84□□□□□ -0.99
LINC02549-201ENST00000445346 STK32AQ8WU08 396 aa8.84□□□□□ -0.99
LINC02549-201ENST00000445346 HDAC7Q8WUI4 952 aa8.84□□□□□ -0.99
LINC02549-201ENST00000445346 TCP11Q8WWU5 503 aa8.84□□□□□ -0.99
LINC02549-201ENST00000445346 PRPF31Q8WWY3 499 aaKnown RBP8.84□□□□□ -0.99
LINC02549-201ENST00000445346 JAKMIP1Q96N16 626 aaKnown RBP8.84□□□□□ -0.99
LINC02549-201ENST00000445346 GAD1Q99259 594 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms