RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 EXOC1Q9NV70 894 aa26.11■■□□□ 1.77
C9orf3-207ENST00000445181 SMIM28A0A1B0GU29 152 aa26.1■■□□□ 1.77
C9orf3-207ENST00000445181 CXCL8P10145 99 aa26.1■■□□□ 1.77
C9orf3-207ENST00000445181 POSTNQ15063 836 aa26.1■■□□□ 1.77
C9orf3-207ENST00000445181 ALKAL1Q6UXT8 129 aa26.1■■□□□ 1.77
C9orf3-207ENST00000445181 ADHFE1Q8IWW8 467 aa26.1■■□□□ 1.77
C9orf3-207ENST00000445181 GLIS3Q8NEA6 775 aa26.1■■□□□ 1.77
C9orf3-207ENST00000445181 VN1R2Q8NFZ6 395 aa26.1■■□□□ 1.77
C9orf3-207ENST00000445181 RABGGTAQ92696 567 aa26.1■■□□□ 1.77
C9orf3-207ENST00000445181 STK39Q9UEW8 545 aa26.1■■□□□ 1.77
C9orf3-207ENST00000445181 TNFSF9P41273 254 aa26.09■■□□□ 1.77
C9orf3-207ENST00000445181 SMC1AQ14683 1233 aaKnown RBP26.09■■□□□ 1.77
C9orf3-207ENST00000445181 MRPL43Q8N983 215 aaKnown RBP26.09■■□□□ 1.77
C9orf3-207ENST00000445181 SMRP1Q8NCR6 262 aa26.09■■□□□ 1.77
C9orf3-207ENST00000445181 PPP1R10Q96QC0 940 aaKnown RBP26.09■■□□□ 1.77
C9orf3-207ENST00000445181 RPF1Q9H9Y2 349 aaKnown RBP26.09■■□□□ 1.77
C9orf3-207ENST00000445181 SLC39A2Q9NP94 309 aa26.09■■□□□ 1.77
C9orf3-207ENST00000445181 SLC38A7Q9NVC3 462 aa26.09■■□□□ 1.77
C9orf3-207ENST00000445181 MARCH5Q9NX47 278 aa26.09■■□□□ 1.77
C9orf3-207ENST00000445181 CNTN3Q9P232 1028 aa26.09■■□□□ 1.77
C9orf3-207ENST00000445181 CACNG4Q9UBN1 327 aa26.09■■□□□ 1.77
C9orf3-207ENST00000445181 AGO2Q9UKV8 859 aaKnown RBP26.09■■□□□ 1.77
C9orf3-207ENST00000445181 CITO14578 2027 aa26.09■■□□□ 1.77
C9orf3-207ENST00000445181 TRIP11Q15643 1979 aa26.08■■□□□ 1.77
C9orf3-207ENST00000445181 EIF3DO15371 548 aaKnown RBP eCLIP26.08■■□□□ 1.77
C9orf3-207ENST00000445181 TADA2AO75478 443 aa26.08■■□□□ 1.77
C9orf3-207ENST00000445181 PPP2R3AQ06190 1150 aa26.08■■□□□ 1.77
C9orf3-207ENST00000445181 HSP90AA2PQ14568 343 aaPredicted RBP26.08■■□□□ 1.77
C9orf3-207ENST00000445181 SLC10A6Q3KNW5 377 aa26.08■■□□□ 1.77
C9orf3-207ENST00000445181 XKR4Q5GH76 650 aa26.08■■□□□ 1.77
C9orf3-207ENST00000445181 ZBTB41Q5SVQ8 909 aa26.08■■□□□ 1.77
C9orf3-207ENST00000445181 KANK3Q6NY19 840 aa26.08■■□□□ 1.77
C9orf3-207ENST00000445181 CCDC47Q96A33 483 aaKnown RBP26.08■■□□□ 1.77
C9orf3-207ENST00000445181 PLEKHA5Q9HAU0 1116 aa26.08■■□□□ 1.77
C9orf3-207ENST00000445181 STYXL1Q9Y6J8 313 aa26.08■■□□□ 1.77
C9orf3-207ENST00000445181 C19orf67A6NJJ6 358 aa26.07■■□□□ 1.76
C9orf3-207ENST00000445181 F8W810 466 aa26.07■■□□□ 1.76
C9orf3-207ENST00000445181 PI4K2BG5E9Z4 385 aa26.07■■□□□ 1.76
C9orf3-207ENST00000445181 CXCL14O95715 111 aa26.07■■□□□ 1.76
C9orf3-207ENST00000445181 KCNE1P15382 129 aa26.07■■□□□ 1.76
C9orf3-207ENST00000445181 FAM160A1Q05DH4 1040 aa26.07■■□□□ 1.76
C9orf3-207ENST00000445181 EHHADHQ08426 723 aa26.07■■□□□ 1.76
C9orf3-207ENST00000445181 NAB2Q15742 525 aa26.07■■□□□ 1.76
C9orf3-207ENST00000445181 FMR1NBQ8N0W7 255 aaPredicted RBP26.07■■□□□ 1.76
C9orf3-207ENST00000445181 TMEM87AQ8NBN3 555 aa26.07■■□□□ 1.76
C9orf3-207ENST00000445181 FAM212AQ96EL1 285 aa26.07■■□□□ 1.76
C9orf3-207ENST00000445181 PAAF1Q9BRP4 392 aa26.07■■□□□ 1.76
C9orf3-207ENST00000445181 ADAM28Q9UKQ2 775 aa26.07■■□□□ 1.76
C9orf3-207ENST00000445181 C2orf71A6NGG8 1288 aa26.06■■□□□ 1.76
C9orf3-207ENST00000445181 TULP1O00294 542 aaPredicted RBP26.06■■□□□ 1.76
C9orf3-207ENST00000445181 KLRC4O43908 158 aa26.06■■□□□ 1.76
C9orf3-207ENST00000445181 FAM189A1O60320 539 aa26.06■■□□□ 1.76
C9orf3-207ENST00000445181 RPN1P04843 607 aaKnown RBP26.06■■□□□ 1.76
C9orf3-207ENST00000445181 PRR29P0C7W0 189 aa26.06■■□□□ 1.76
C9orf3-207ENST00000445181 SRGAP2BP0DMP2 458 aa26.06■■□□□ 1.76
C9orf3-207ENST00000445181 ADSSP30520 456 aa26.06■■□□□ 1.76
C9orf3-207ENST00000445181 ACOT2P49753 483 aa26.06■■□□□ 1.76
C9orf3-207ENST00000445181 KCNC3Q14003 757 aa26.06■■□□□ 1.76
C9orf3-207ENST00000445181 ENOX2Q16206 610 aaKnown RBP26.06■■□□□ 1.76
C9orf3-207ENST00000445181 KMT5BQ4FZB7 885 aa26.06■■□□□ 1.76
C9orf3-207ENST00000445181 LLGL2Q6P1M3 1020 aa26.06■■□□□ 1.76
C9orf3-207ENST00000445181 TMEM184AQ6ZMB5 413 aa26.06■■□□□ 1.76
C9orf3-207ENST00000445181 HASPINQ8TF76 798 aa26.06■■□□□ 1.76
C9orf3-207ENST00000445181 NOC3LQ8WTT2 800 aaKnown RBP26.06■■□□□ 1.76
C9orf3-207ENST00000445181 UROC1Q96N76 676 aa26.06■■□□□ 1.76
C9orf3-207ENST00000445181 ZMAT2Q96NC0 199 aaKnown RBP26.06■■□□□ 1.76
C9orf3-207ENST00000445181 POP1Q99575 1024 aaKnown RBP26.06■■□□□ 1.76
C9orf3-207ENST00000445181 VN1R3Q9BXE9 311 aa26.06■■□□□ 1.76
C9orf3-207ENST00000445181 ZBP1Q9H171 429 aa26.06■■□□□ 1.76
C9orf3-207ENST00000445181 GOLGA2P5Q9HBQ8 144 aa26.06■■□□□ 1.76
C9orf3-207ENST00000445181 CPSF3Q9UKF6 684 aaKnown RBP26.06■■□□□ 1.76
C9orf3-207ENST00000445181 USP15Q9Y4E8 981 aaPredicted RBP26.06■■□□□ 1.76
C9orf3-207ENST00000445181 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP26.05■■□□□ 1.76
C9orf3-207ENST00000445181 MEFVO15553 781 aaPredicted RBP26.05■■□□□ 1.76
C9orf3-207ENST00000445181 ARMCX5Q6P1M9 558 aa26.05■■□□□ 1.76
C9orf3-207ENST00000445181 EPM2AIP1Q7L775 607 aaPredicted RBP26.05■■□□□ 1.76
C9orf3-207ENST00000445181 NELFCDQ8IXH7 590 aa26.05■■□□□ 1.76
C9orf3-207ENST00000445181 ZNF507Q8TCN5 953 aa26.05■■□□□ 1.76
C9orf3-207ENST00000445181 KIF12Q96FN5 646 aa26.05■■□□□ 1.76
C9orf3-207ENST00000445181 IPO9Q96P70 1041 aaKnown RBP26.05■■□□□ 1.76
C9orf3-207ENST00000445181 UBE4BO95155 1302 aa26.05■■□□□ 1.76
C9orf3-207ENST00000445181 TTC26A0AVF1 554 aa26.04■■□□□ 1.76
C9orf3-207ENST00000445181 LACTBL1A8MY62 500 aa26.04■■□□□ 1.76
C9orf3-207ENST00000445181 KIF4AO95239 1232 aa26.04■■□□□ 1.76
C9orf3-207ENST00000445181 SOD2P04179 222 aa26.04■■□□□ 1.76
C9orf3-207ENST00000445181 CTSAP10619 480 aa26.04■■□□□ 1.76
C9orf3-207ENST00000445181 COL9A1P20849 921 aa26.04■■□□□ 1.76
C9orf3-207ENST00000445181 GARTP22102 1010 aa26.04■■□□□ 1.76
C9orf3-207ENST00000445181 CLCNKBP51801 687 aa26.04■■□□□ 1.76
C9orf3-207ENST00000445181 SPAG1Q07617 926 aa26.04■■□□□ 1.76
C9orf3-207ENST00000445181 PSMD2Q13200 908 aa26.04■■□□□ 1.76
C9orf3-207ENST00000445181 SCFD1Q8WVM8 642 aa26.04■■□□□ 1.76
C9orf3-207ENST00000445181 AUTS2Q8WXX7 1259 aa26.04■■□□□ 1.76
C9orf3-207ENST00000445181 C18orf25Q96B23 403 aaPredicted RBP26.04■■□□□ 1.76
C9orf3-207ENST00000445181 SAAL1Q96ER3 474 aa26.04■■□□□ 1.76
C9orf3-207ENST00000445181 FAM213AQ9BRX8 229 aa26.04■■□□□ 1.76
C9orf3-207ENST00000445181 TSHZ2Q9NRE2 1034 aa26.04■■□□□ 1.76
C9orf3-207ENST00000445181 URODP06132 367 aa26.03■■□□□ 1.76
C9orf3-207ENST00000445181 SOX4Q06945 474 aaPredicted RBP26.03■■□□□ 1.76
C9orf3-207ENST00000445181 DPYDQ12882 1025 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms