RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 APBB1IPQ7Z5R6 666 aaPredicted RBP16.95■□□□□ 0.3
SEC13-213ENST00000445064 ITFG1Q8TB96 612 aa16.95■□□□□ 0.3
SEC13-213ENST00000445064 FGF13Q92913 245 aa16.95■□□□□ 0.3
SEC13-213ENST00000445064 UROC1Q96N76 676 aa16.95■□□□□ 0.3
SEC13-213ENST00000445064 CCDC94Q9BW85 323 aaPredicted RBP16.95■□□□□ 0.3
SEC13-213ENST00000445064 CDT1Q9H211 546 aa16.95■□□□□ 0.3
SEC13-213ENST00000445064 TMEM134Q9H6X4 195 aa16.95■□□□□ 0.3
SEC13-213ENST00000445064 PTPRHQ9HD43 1115 aa16.95■□□□□ 0.3
SEC13-213ENST00000445064 KMT5AQ9NQR1 393 aa16.95■□□□□ 0.3
SEC13-213ENST00000445064 HCFC1R1Q9NWW0 138 aa16.95■□□□□ 0.3
SEC13-213ENST00000445064 CDH7Q9ULB5 785 aa16.95■□□□□ 0.3
SEC13-213ENST00000445064 CDY1Q9Y6F8 540 aa16.95■□□□□ 0.3
SEC13-213ENST00000445064 ZFP37Q9Y6Q3 630 aaPredicted RBP16.95■□□□□ 0.3
SEC13-213ENST00000445064 DOCK6Q96HP0 2047 aa16.95■□□□□ 0.3
SEC13-213ENST00000445064 VWA8A3KMH1 1905 aa16.95■□□□□ 0.3
SEC13-213ENST00000445064 TRAPPC3O43617 180 aa16.94■□□□□ 0.3
SEC13-213ENST00000445064 XYLBO75191 536 aa16.94■□□□□ 0.3
SEC13-213ENST00000445064 DCNP07585 359 aaKnown RBP16.94■□□□□ 0.3
SEC13-213ENST00000445064 GPC5P78333 572 aa16.94■□□□□ 0.3
SEC13-213ENST00000445064 MAPK7Q13164 816 aa16.94■□□□□ 0.3
SEC13-213ENST00000445064 DMP1Q13316 513 aaPredicted RBP16.94■□□□□ 0.3
SEC13-213ENST00000445064 UVSSAQ2YD98 709 aa16.94■□□□□ 0.3
SEC13-213ENST00000445064 ZNF568Q3ZCX4 644 aa16.94■□□□□ 0.3
SEC13-213ENST00000445064 XKR4Q5GH76 650 aa16.94■□□□□ 0.3
SEC13-213ENST00000445064 SPECC1Q5M775 1068 aa16.94■□□□□ 0.3
SEC13-213ENST00000445064 DTHD1Q6ZMT9 781 aa16.94■□□□□ 0.3
SEC13-213ENST00000445064 C1orf186Q6ZWK4 172 aa16.94■□□□□ 0.3
SEC13-213ENST00000445064 NKD2Q969F2 451 aaPredicted RBP16.94■□□□□ 0.3
SEC13-213ENST00000445064 DDX27Q96GQ7 796 aaKnown RBP16.94■□□□□ 0.3
SEC13-213ENST00000445064 ZMAT2Q96NC0 199 aaKnown RBP16.94■□□□□ 0.3
SEC13-213ENST00000445064 TCHPQ9BT92 498 aa16.94■□□□□ 0.3
SEC13-213ENST00000445064 MMTAG2Q9BU76 263 aaKnown RBP16.94■□□□□ 0.3
SEC13-213ENST00000445064 RUSC1Q9BVN2 902 aa16.94■□□□□ 0.3
SEC13-213ENST00000445064 MRPL4Q9BYD3 311 aaKnown RBP16.94■□□□□ 0.3
SEC13-213ENST00000445064 SLC2A4RGQ9NR83 387 aa16.94■□□□□ 0.3
SEC13-213ENST00000445064 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.94■□□□□ 0.3
SEC13-213ENST00000445064 TOPORSQ9NS56 1045 aaPredicted RBP16.94■□□□□ 0.3
SEC13-213ENST00000445064 DNMT3BQ9UBC3 853 aaKnown RBP16.94■□□□□ 0.3
SEC13-213ENST00000445064 DAXXQ9UER7 740 aaPredicted RBP16.94■□□□□ 0.3
SEC13-213ENST00000445064 TRIP11Q15643 1979 aa16.94■□□□□ 0.3
SEC13-213ENST00000445064 USP34Q70CQ2 3546 aa16.94■□□□□ 0.3
SEC13-213ENST00000445064 PHLPP2Q6ZVD8 1323 aa16.94■□□□□ 0.3
SEC13-213ENST00000445064 LAD1O00515 517 aa16.93■□□□□ 0.3
SEC13-213ENST00000445064 SLC16A4O15374 487 aa16.93■□□□□ 0.3
SEC13-213ENST00000445064 PRPHP41219 470 aa16.93■□□□□ 0.3
SEC13-213ENST00000445064 RAD51AP2Q09MP3 1159 aa16.93■□□□□ 0.3
SEC13-213ENST00000445064 ZRSR1Q15695 479 aaKnown RBP16.93■□□□□ 0.3
SEC13-213ENST00000445064 MCTP1Q6DN14 999 aa16.93■□□□□ 0.3
SEC13-213ENST00000445064 PHLDB3Q6NSJ2 640 aa16.93■□□□□ 0.3
SEC13-213ENST00000445064 ANKS3Q6ZW76 656 aa16.93■□□□□ 0.3
SEC13-213ENST00000445064 ZBTB45Q96K62 511 aaPredicted RBP16.93■□□□□ 0.3
SEC13-213ENST00000445064 DRC1Q96MC2 740 aa16.93■□□□□ 0.3
SEC13-213ENST00000445064 ACAP3Q96P50 834 aa16.93■□□□□ 0.3
SEC13-213ENST00000445064 ARHGEF3Q9NR81 526 aa16.93■□□□□ 0.3
SEC13-213ENST00000445064 ARHGAP28Q9P2N2 729 aa16.93■□□□□ 0.3
SEC13-213ENST00000445064 SIT1Q9Y3P8 196 aa16.93■□□□□ 0.3
SEC13-213ENST00000445064 RBM19Q9Y4C8 960 aaKnown RBP16.93■□□□□ 0.3
SEC13-213ENST00000445064 BACE2Q9Y5Z0 518 aa16.93■□□□□ 0.3
SEC13-213ENST00000445064 HARSP12081 509 aaKnown RBP16.92■□□□□ 0.3
SEC13-213ENST00000445064 ING5Q8WYH8 240 aa16.92■□□□□ 0.3
SEC13-213ENST00000445064 PLIN2Q99541 437 aa16.92■□□□□ 0.3
SEC13-213ENST00000445064 SLC38A7Q9NVC3 462 aa16.92■□□□□ 0.3
SEC13-213ENST00000445064 ZFHX2Q9C0A1 2572 aaPredicted RBP16.91■□□□□ 0.3
SEC13-213ENST00000445064 PODXLO00592 558 aa16.91■□□□□ 0.3
SEC13-213ENST00000445064 ABLIM1O14639 778 aa16.91■□□□□ 0.3
SEC13-213ENST00000445064 MCF2P10911 925 aa16.91■□□□□ 0.3
SEC13-213ENST00000445064 PROZP22891 400 aa16.91■□□□□ 0.3
SEC13-213ENST00000445064 ARPP19P56211 112 aa16.91■□□□□ 0.3
SEC13-213ENST00000445064 SNW1Q13573 536 aaKnown RBP16.91■□□□□ 0.3
SEC13-213ENST00000445064 C8orf34Q49A92 452 aa16.91■□□□□ 0.3
SEC13-213ENST00000445064 PABPC1LQ4VXU2 614 aaKnown RBP16.91■□□□□ 0.3
SEC13-213ENST00000445064 SEZ6Q53EL9 994 aa16.91■□□□□ 0.3
SEC13-213ENST00000445064 MPZL3Q6UWV2 235 aa16.91■□□□□ 0.3
SEC13-213ENST00000445064 MTSS1LQ765P7 747 aa16.91■□□□□ 0.3
SEC13-213ENST00000445064 ZNF461Q8TAF7 563 aa16.91■□□□□ 0.3
SEC13-213ENST00000445064 C18orf25Q96B23 403 aaPredicted RBP16.91■□□□□ 0.3
SEC13-213ENST00000445064 SNX27Q96L92 541 aa16.91■□□□□ 0.3
SEC13-213ENST00000445064 PNMA5Q96PV4 448 aa16.91■□□□□ 0.3
SEC13-213ENST00000445064 NTPCRQ9BSD7 190 aaKnown RBP16.91■□□□□ 0.3
SEC13-213ENST00000445064 FOXQ1Q9C009 403 aa16.91■□□□□ 0.3
SEC13-213ENST00000445064 C17orf75Q9HAS0 396 aa16.91■□□□□ 0.3
SEC13-213ENST00000445064 DLGAP2Q9P1A6 1054 aa16.91■□□□□ 0.3
SEC13-213ENST00000445064 MEFVO15553 781 aaPredicted RBP16.9■□□□□ 0.3
SEC13-213ENST00000445064 LRRN2O75325 713 aa16.9■□□□□ 0.3
SEC13-213ENST00000445064 KCNE1P15382 129 aa16.9■□□□□ 0.3
SEC13-213ENST00000445064 GUCY2CP25092 1073 aa16.9■□□□□ 0.3
SEC13-213ENST00000445064 STARD6P59095 220 aa16.9■□□□□ 0.3
SEC13-213ENST00000445064 ROR1Q01973 937 aa16.9■□□□□ 0.3
SEC13-213ENST00000445064 VARS2Q5ST30 1063 aaKnown RBP16.9■□□□□ 0.3
SEC13-213ENST00000445064 RTL10Q7L3V2 364 aa16.9■□□□□ 0.3
SEC13-213ENST00000445064 NPAS3Q8IXF0 933 aa16.9■□□□□ 0.3
SEC13-213ENST00000445064 ADSSL1Q8N142 457 aa16.9■□□□□ 0.3
SEC13-213ENST00000445064 MCRS1Q96EZ8 462 aa16.9■□□□□ 0.3
SEC13-213ENST00000445064 KXD1Q9BQD3 176 aa16.9■□□□□ 0.3
SEC13-213ENST00000445064 MRPS23Q9Y3D9 190 aaKnown RBP16.9■□□□□ 0.3
SEC13-213ENST00000445064 NUB1Q9Y5A7 615 aa16.9■□□□□ 0.3
SEC13-213ENST00000445064 WDR27A2RRH5 827 aa16.89■□□□□ 0.29
SEC13-213ENST00000445064 ABLIM3O94929 683 aa16.89■□□□□ 0.29
SEC13-213ENST00000445064 RHOP08100 348 aa16.89■□□□□ 0.29
SEC13-213ENST00000445064 POU2F2P09086 479 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms