RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 PLEKHO2Q8TD55 490 aa14□□□□□ -0.17
PDLIM2-212ENST00000443561 HASPINQ8TF76 798 aa14□□□□□ -0.17
PDLIM2-212ENST00000443561 POMGNT1Q8WZA1 660 aa14□□□□□ -0.17
PDLIM2-212ENST00000443561 B3GALT6Q96L58 329 aa14□□□□□ -0.17
PDLIM2-212ENST00000443561 PCIF1Q9H4Z3 704 aa14□□□□□ -0.17
PDLIM2-212ENST00000443561 TLR9Q9NR96 1032 aa14□□□□□ -0.17
PDLIM2-212ENST00000443561 AAASQ9NRG9 546 aa14□□□□□ -0.17
PDLIM2-212ENST00000443561 PCDHA5Q9Y5H7 936 aa14□□□□□ -0.17
PDLIM2-212ENST00000443561 UNC80Q8N2C7 3258 aa14□□□□□ -0.17
PDLIM2-212ENST00000443561 MTCL1Q9Y4B5 1905 aaKnown RBP14□□□□□ -0.17
PDLIM2-212ENST00000443561 CLIC2O15247 247 aa13.99□□□□□ -0.17
PDLIM2-212ENST00000443561 ABCD1P33897 745 aa13.99□□□□□ -0.17
PDLIM2-212ENST00000443561 MATR3P43243 847 aaKnown RBP eCLIP13.99□□□□□ -0.17
PDLIM2-212ENST00000443561 ALDH7A1P49419 539 aaKnown RBP13.99□□□□□ -0.17
PDLIM2-212ENST00000443561 CLCNKBP51801 687 aa13.99□□□□□ -0.17
PDLIM2-212ENST00000443561 UBE2HP62256 183 aa13.99□□□□□ -0.17
PDLIM2-212ENST00000443561 KCNC3Q14003 757 aa13.99□□□□□ -0.17
PDLIM2-212ENST00000443561 UPP1Q16831 310 aa13.99□□□□□ -0.17
PDLIM2-212ENST00000443561 CSPP1Q1MSJ5 1256 aa13.99□□□□□ -0.17
PDLIM2-212ENST00000443561 ZCWPW2Q504Y3 356 aa13.99□□□□□ -0.17
PDLIM2-212ENST00000443561 PLPP4Q5VZY2 271 aa13.99□□□□□ -0.17
PDLIM2-212ENST00000443561 JADE1Q6IE81 842 aa13.99□□□□□ -0.17
PDLIM2-212ENST00000443561 DDX53Q86TM3 631 aaKnown RBP13.99□□□□□ -0.17
PDLIM2-212ENST00000443561 CBWD2Q8IUF1 395 aa13.99□□□□□ -0.17
PDLIM2-212ENST00000443561 BRSK2Q8IWQ3 736 aa13.99□□□□□ -0.17
PDLIM2-212ENST00000443561 PPM1EQ8WY54 764 aa13.99□□□□□ -0.17
PDLIM2-212ENST00000443561 FBXL18Q96ME1 805 aa13.99□□□□□ -0.17
PDLIM2-212ENST00000443561 HERC2P3Q9BVR0 1158 aa13.99□□□□□ -0.17
PDLIM2-212ENST00000443561 FAN1Q9Y2M0 1017 aa13.99□□□□□ -0.17
PDLIM2-212ENST00000443561 C2orf16Q68DN1 1984 aa13.99□□□□□ -0.17
PDLIM2-212ENST00000443561 C2orf71A6NGG8 1288 aa13.98□□□□□ -0.17
PDLIM2-212ENST00000443561 TMEM189-UBE2V1I3L0A0 370 aa13.98□□□□□ -0.17
PDLIM2-212ENST00000443561 DLL1O00548 723 aa13.98□□□□□ -0.17
PDLIM2-212ENST00000443561 LTBRP36941 435 aa13.98□□□□□ -0.17
PDLIM2-212ENST00000443561 DLX2Q07687 328 aaPredicted RBP13.98□□□□□ -0.17
PDLIM2-212ENST00000443561 HSP90AA2PQ14568 343 aaPredicted RBP13.98□□□□□ -0.17
PDLIM2-212ENST00000443561 PTPN14Q15678 1187 aa13.98□□□□□ -0.17
PDLIM2-212ENST00000443561 KNOP1Q1ED39 458 aaKnown RBP13.98□□□□□ -0.17
PDLIM2-212ENST00000443561 SLFN12LQ6IEE8 588 aa13.98□□□□□ -0.17
PDLIM2-212ENST00000443561 FUT10Q6P4F1 479 aa13.98□□□□□ -0.17
PDLIM2-212ENST00000443561 APBB1IPQ7Z5R6 666 aaPredicted RBP13.98□□□□□ -0.17
PDLIM2-212ENST00000443561 C12orf56Q8IXR9 622 aa13.98□□□□□ -0.17
PDLIM2-212ENST00000443561 ELOA2Q8IYF1 753 aaPredicted RBP13.98□□□□□ -0.17
PDLIM2-212ENST00000443561 VPS52Q8N1B4 723 aa13.98□□□□□ -0.17
PDLIM2-212ENST00000443561 TCF25Q9BQ70 676 aa13.98□□□□□ -0.17
PDLIM2-212ENST00000443561 FAM213AQ9BRX8 229 aa13.98□□□□□ -0.17
PDLIM2-212ENST00000443561 NSUN3Q9H649 340 aaKnown RBP13.98□□□□□ -0.17
PDLIM2-212ENST00000443561 TMEM206Q9H813 350 aa13.98□□□□□ -0.17
PDLIM2-212ENST00000443561 TOPORSQ9NS56 1045 aaPredicted RBP13.98□□□□□ -0.17
PDLIM2-212ENST00000443561 DMAC2Q9NW81 257 aa13.98□□□□□ -0.17
PDLIM2-212ENST00000443561 HSPBP1Q9NZL4 362 aa13.98□□□□□ -0.17
PDLIM2-212ENST00000443561 MAN1B1Q9UKM7 699 aa13.98□□□□□ -0.17
PDLIM2-212ENST00000443561 ADAM28Q9UKQ2 775 aa13.98□□□□□ -0.17
PDLIM2-212ENST00000443561 EXOC7Q9UPT5 735 aa13.98□□□□□ -0.17
PDLIM2-212ENST00000443561 MAPK8IP1Q9UQF2 711 aa13.98□□□□□ -0.17
PDLIM2-212ENST00000443561 GOLGA6L4A6NEF3 574 aa13.97□□□□□ -0.17
PDLIM2-212ENST00000443561 I3L4J1 428 aa13.97□□□□□ -0.17
PDLIM2-212ENST00000443561 PER2O15055 1255 aa13.97□□□□□ -0.17
PDLIM2-212ENST00000443561 EXTL3O43909 919 aa13.97□□□□□ -0.17
PDLIM2-212ENST00000443561 TBX10O75333 385 aa13.97□□□□□ -0.17
PDLIM2-212ENST00000443561 SOD2P04179 222 aa13.97□□□□□ -0.17
PDLIM2-212ENST00000443561 ALDH2P05091 517 aa13.97□□□□□ -0.17
PDLIM2-212ENST00000443561 CTSAP10619 480 aa13.97□□□□□ -0.17
PDLIM2-212ENST00000443561 CD44P16070 742 aaKnown RBP13.97□□□□□ -0.17
PDLIM2-212ENST00000443561 LRPAP1P30533 357 aa13.97□□□□□ -0.17
PDLIM2-212ENST00000443561 BRCC3P46736 316 aa13.97□□□□□ -0.17
PDLIM2-212ENST00000443561 PMS1P54277 932 aaKnown RBP13.97□□□□□ -0.17
PDLIM2-212ENST00000443561 YARSP54577 528 aaKnown RBP13.97□□□□□ -0.17
PDLIM2-212ENST00000443561 PSMD2Q13200 908 aa13.97□□□□□ -0.17
PDLIM2-212ENST00000443561 CTC1Q2NKJ3 1217 aa13.97□□□□□ -0.17
PDLIM2-212ENST00000443561 TIGD5Q53EQ6 642 aa13.97□□□□□ -0.17
PDLIM2-212ENST00000443561 RTP2Q5QGT7 225 aa13.97□□□□□ -0.17
PDLIM2-212ENST00000443561 ARMCX5Q6P1M9 558 aa13.97□□□□□ -0.17
PDLIM2-212ENST00000443561 SYCP3Q8IZU3 236 aa13.97□□□□□ -0.17
PDLIM2-212ENST00000443561 GPT2Q8TD30 523 aa13.97□□□□□ -0.17
PDLIM2-212ENST00000443561 KIF12Q96FN5 646 aa13.97□□□□□ -0.17
PDLIM2-212ENST00000443561 TMEM169Q96HH4 297 aa13.97□□□□□ -0.17
PDLIM2-212ENST00000443561 FAM193BQ96PV7 902 aaPredicted RBP13.97□□□□□ -0.17
PDLIM2-212ENST00000443561 RPF1Q9H9Y2 349 aaKnown RBP13.97□□□□□ -0.17
PDLIM2-212ENST00000443561 PLEKHA5Q9HAU0 1116 aa13.97□□□□□ -0.17
PDLIM2-212ENST00000443561 CHST7Q9NS84 486 aa13.97□□□□□ -0.17
PDLIM2-212ENST00000443561 DENND4AQ7Z401 1863 aa13.97□□□□□ -0.17
PDLIM2-212ENST00000443561 TCF20Q9UGU0 1960 aaKnown RBP13.96□□□□□ -0.17
PDLIM2-212ENST00000443561 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.96□□□□□ -0.17
PDLIM2-212ENST00000443561 PODXLO00592 558 aa13.96□□□□□ -0.17
PDLIM2-212ENST00000443561 SPTLC1O15269 473 aa13.96□□□□□ -0.17
PDLIM2-212ENST00000443561 CASP4P49662 377 aa13.96□□□□□ -0.17
PDLIM2-212ENST00000443561 TFF2Q03403 129 aa13.96□□□□□ -0.17
PDLIM2-212ENST00000443561 PPP2R3AQ06190 1150 aa13.96□□□□□ -0.17
PDLIM2-212ENST00000443561 PTPROQ16827 1216 aa13.96□□□□□ -0.17
PDLIM2-212ENST00000443561 DUSP6Q16828 381 aa13.96□□□□□ -0.17
PDLIM2-212ENST00000443561 KIAA0319Q5VV43 1072 aa13.96□□□□□ -0.17
PDLIM2-212ENST00000443561 SPATA1Q5VX52 437 aa13.96□□□□□ -0.17
PDLIM2-212ENST00000443561 LMBRD2Q68DH5 695 aaPredicted RBP13.96□□□□□ -0.17
PDLIM2-212ENST00000443561 KANK3Q6NY19 840 aa13.96□□□□□ -0.17
PDLIM2-212ENST00000443561 GPD1LQ8N335 351 aa13.96□□□□□ -0.17
PDLIM2-212ENST00000443561 GUF1Q8N442 669 aaKnown RBP13.96□□□□□ -0.17
PDLIM2-212ENST00000443561 PDE11AQ9HCR9 933 aa13.96□□□□□ -0.17
PDLIM2-212ENST00000443561 IRAK3Q9Y616 596 aa13.96□□□□□ -0.17
PDLIM2-212ENST00000443561 DOCK6Q96HP0 2047 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms