RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 SPATA31D3P0C874 917 aa9.59□□□□□ -0.87
USP6NL-203ENST00000443016 GUCY2CP25092 1073 aa9.59□□□□□ -0.87
USP6NL-203ENST00000443016 MATR3P43243 847 aaKnown RBP eCLIP9.59□□□□□ -0.87
USP6NL-203ENST00000443016 TAGLNQ01995 201 aaKnown RBP9.59□□□□□ -0.87
USP6NL-203ENST00000443016 CREMQ03060 361 aa9.59□□□□□ -0.87
USP6NL-203ENST00000443016 DNM1Q05193 864 aaKnown RBP9.59□□□□□ -0.87
USP6NL-203ENST00000443016 SF3A1Q15459 793 aaKnown RBP9.59□□□□□ -0.87
USP6NL-203ENST00000443016 FAM171A1Q5VUB5 890 aa9.59□□□□□ -0.87
USP6NL-203ENST00000443016 CLEC17AQ6ZS10 378 aa9.59□□□□□ -0.87
USP6NL-203ENST00000443016 TRIM67Q6ZTA4 783 aa9.59□□□□□ -0.87
USP6NL-203ENST00000443016 SPATA31D4Q6ZUB0 917 aa9.59□□□□□ -0.87
USP6NL-203ENST00000443016 TDRD5Q8NAT2 981 aaKnown RBP9.59□□□□□ -0.87
USP6NL-203ENST00000443016 ACSF2Q96CM8 615 aaPredicted RBP9.59□□□□□ -0.87
USP6NL-203ENST00000443016 PNMA5Q96PV4 448 aa9.59□□□□□ -0.87
USP6NL-203ENST00000443016 ACO2Q99798 780 aaKnown RBP9.59□□□□□ -0.87
USP6NL-203ENST00000443016 TMEM134Q9H6X4 195 aa9.59□□□□□ -0.87
USP6NL-203ENST00000443016 ARHGAP28Q9P2N2 729 aa9.59□□□□□ -0.87
USP6NL-203ENST00000443016 ANKFY1Q9P2R3 1169 aa9.59□□□□□ -0.87
USP6NL-203ENST00000443016 TECTAO75443 2155 aa9.59□□□□□ -0.88
USP6NL-203ENST00000443016 TDRD15B5MCY1 1934 aaKnown RBP9.58□□□□□ -0.88
USP6NL-203ENST00000443016 C2CD4DB7Z1M9 353 aa9.58□□□□□ -0.88
USP6NL-203ENST00000443016 PLS3P13797 630 aa9.58□□□□□ -0.88
USP6NL-203ENST00000443016 ZXDAP98168 799 aa9.58□□□□□ -0.88
USP6NL-203ENST00000443016 CACNB1Q02641 598 aaPredicted RBP9.58□□□□□ -0.88
USP6NL-203ENST00000443016 ELAVL2Q12926 359 aaKnown RBP9.58□□□□□ -0.88
USP6NL-203ENST00000443016 MAPK7Q13164 816 aa9.58□□□□□ -0.88
USP6NL-203ENST00000443016 PTPN21Q16825 1174 aa9.58□□□□□ -0.88
USP6NL-203ENST00000443016 HYIQ5T013 277 aa9.58□□□□□ -0.88
USP6NL-203ENST00000443016 C15orf39Q6ZRI6 1047 aa9.58□□□□□ -0.88
USP6NL-203ENST00000443016 GPR149Q86SP6 731 aa9.58□□□□□ -0.88
USP6NL-203ENST00000443016 RNF168Q8IYW5 571 aaPredicted RBP9.58□□□□□ -0.88
USP6NL-203ENST00000443016 CEP120Q8N960 986 aa9.58□□□□□ -0.88
USP6NL-203ENST00000443016 BICD1Q96G01 975 aa9.58□□□□□ -0.88
USP6NL-203ENST00000443016 TTPALQ9BTX7 342 aa9.58□□□□□ -0.88
USP6NL-203ENST00000443016 CDT1Q9H211 546 aa9.58□□□□□ -0.88
USP6NL-203ENST00000443016 PIDD1Q9HB75 910 aa9.58□□□□□ -0.88
USP6NL-203ENST00000443016 CCDC195A0A1B0GUA6 201 aa9.58□□□□□ -0.88
USP6NL-203ENST00000443016 YEATS4O95619 227 aa9.58□□□□□ -0.88
USP6NL-203ENST00000443016 RPL17P18621 184 aaKnown RBP9.58□□□□□ -0.88
USP6NL-203ENST00000443016 SLC12A3P55017 1021 aa9.58□□□□□ -0.88
USP6NL-203ENST00000443016 MTMR3Q13615 1198 aa9.58□□□□□ -0.88
USP6NL-203ENST00000443016 STK38Q15208 465 aa9.58□□□□□ -0.88
USP6NL-203ENST00000443016 RTP2Q5QGT7 225 aa9.58□□□□□ -0.88
USP6NL-203ENST00000443016 PRSS55Q6UWB4 352 aaPredicted RBP9.58□□□□□ -0.88
USP6NL-203ENST00000443016 DPH6Q7L8W6 267 aa9.58□□□□□ -0.88
USP6NL-203ENST00000443016 SUGP1Q8IWZ8 645 aaKnown RBP9.58□□□□□ -0.88
USP6NL-203ENST00000443016 UBXN4Q92575 508 aa9.58□□□□□ -0.88
USP6NL-203ENST00000443016 ACAP3Q96P50 834 aa9.58□□□□□ -0.88
USP6NL-203ENST00000443016 PLCD4Q9BRC7 762 aa9.58□□□□□ -0.88
USP6NL-203ENST00000443016 CXCL16Q9H2A7 254 aa9.58□□□□□ -0.88
USP6NL-203ENST00000443016 ZHX3Q9H4I2 956 aa9.58□□□□□ -0.88
USP6NL-203ENST00000443016 RXFP1Q9HBX9 757 aa9.58□□□□□ -0.88
USP6NL-203ENST00000443016 TMEM221A6NGB7 291 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 H0YCG3 227 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 M0R296 226 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 TGM5O43548 720 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 RFPL2O75678 378 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 LONP1P36776 959 aaKnown RBP9.57□□□□□ -0.88
USP6NL-203ENST00000443016 CLCNKBP51801 687 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 SIGLEC14Q08ET2 396 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 FAM173BQ6P4H8 233 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 MPZL3Q6UWV2 235 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 OTOP3Q7RTS5 596 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 GPBP1Q86WP2 473 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 KREMEN2Q8NCW0 462 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 KCNG4Q8TDN1 519 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 SPIRE2Q8WWL2 714 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 NTPCRQ9BSD7 190 aaKnown RBP9.57□□□□□ -0.88
USP6NL-203ENST00000443016 PLEKHA4Q9H4M7 779 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 LIMD1Q9UGP4 676 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 TCHHQ07283 1943 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 NPHP3-ACAD11A0A0J9YXS1 232 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 SMIM28A0A1B0GU29 152 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 CLDN3O15551 220 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 TRAPPC3O43617 180 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 TOM1L1O75674 476 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 FAM13AO94988 1023 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 EFEMP2O95967 443 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 MCF2P10911 925 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 GRM5P41594 1212 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 CEBPZQ03701 1054 aaKnown RBP9.57□□□□□ -0.88
USP6NL-203ENST00000443016 KARSQ15046 597 aaKnown RBP9.57□□□□□ -0.88
USP6NL-203ENST00000443016 PSMD5Q16401 504 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 TMEM119Q4V9L6 283 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 TAS1R3Q7RTX0 852 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 GPR65Q8IYL9 337 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 MYCT1Q8N699 235 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 TMEM161BQ8NDZ6 487 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 GIPC2Q8TF65 315 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 STAMQ92783 540 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 UROC1Q96N76 676 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 USP28Q96RU2 1077 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 GOLGA2P5Q9HBQ8 144 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 SLC38A7Q9NVC3 462 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 FNIP2Q9P278 1114 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.57□□□□□ -0.88
USP6NL-203ENST00000443016 SORCS3Q9UPU3 1222 aa9.57□□□□□ -0.88
USP6NL-203ENST00000443016 SLC26A4O43511 780 aa9.56□□□□□ -0.88
USP6NL-203ENST00000443016 TBCAO75347 108 aaKnown RBP9.56□□□□□ -0.88
USP6NL-203ENST00000443016 ASGR2P07307 311 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms