RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 HOXD13P35453 343 aa16.36■□□□□ 0.21
CSNK1E-210ENST00000442216 UBE2HP62256 183 aa16.36■□□□□ 0.21
CSNK1E-210ENST00000442216 ELAVL2Q12926 359 aaKnown RBP16.36■□□□□ 0.21
CSNK1E-210ENST00000442216 STK4Q13043 487 aa16.36■□□□□ 0.21
CSNK1E-210ENST00000442216 ZBTB6Q15916 424 aa16.36■□□□□ 0.21
CSNK1E-210ENST00000442216 UPP1Q16831 310 aa16.36■□□□□ 0.21
CSNK1E-210ENST00000442216 ARMCX5Q6P1M9 558 aa16.36■□□□□ 0.21
CSNK1E-210ENST00000442216 DCLRE1AQ6PJP8 1040 aa16.36■□□□□ 0.21
CSNK1E-210ENST00000442216 MRPL43Q8N983 215 aaKnown RBP16.36■□□□□ 0.21
CSNK1E-210ENST00000442216 HERC2P3Q9BVR0 1158 aa16.36■□□□□ 0.21
CSNK1E-210ENST00000442216 VN1R3Q9BXE9 311 aa16.36■□□□□ 0.21
CSNK1E-210ENST00000442216 IKZF4Q9H2S9 585 aa16.36■□□□□ 0.21
CSNK1E-210ENST00000442216 DERAQ9Y315 318 aa16.36■□□□□ 0.21
CSNK1E-210ENST00000442216 VWA8A3KMH1 1905 aa16.36■□□□□ 0.21
CSNK1E-210ENST00000442216 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.35■□□□□ 0.21
CSNK1E-210ENST00000442216 LACTBL1A8MY62 500 aa16.35■□□□□ 0.21
CSNK1E-210ENST00000442216 TADA2AO75478 443 aa16.35■□□□□ 0.21
CSNK1E-210ENST00000442216 IL18RAPO95256 599 aa16.35■□□□□ 0.21
CSNK1E-210ENST00000442216 ACOT2P49753 483 aa16.35■□□□□ 0.21
CSNK1E-210ENST00000442216 HYAL1Q12794 435 aa16.35■□□□□ 0.21
CSNK1E-210ENST00000442216 SKIV2LQ15477 1246 aaKnown RBP16.35■□□□□ 0.21
CSNK1E-210ENST00000442216 KNOP1Q1ED39 458 aaKnown RBP16.35■□□□□ 0.21
CSNK1E-210ENST00000442216 ZBTB41Q5SVQ8 909 aa16.35■□□□□ 0.21
CSNK1E-210ENST00000442216 PLPP4Q5VZY2 271 aa16.35■□□□□ 0.21
CSNK1E-210ENST00000442216 FUT10Q6P4F1 479 aa16.35■□□□□ 0.21
CSNK1E-210ENST00000442216 CRELD2Q6UXH1 353 aaPredicted RBP16.35■□□□□ 0.21
CSNK1E-210ENST00000442216 HS2ST1Q7LGA3 356 aa16.35■□□□□ 0.21
CSNK1E-210ENST00000442216 NT5DC4Q86YG4 428 aa16.35■□□□□ 0.21
CSNK1E-210ENST00000442216 C12orf56Q8IXR9 622 aa16.35■□□□□ 0.21
CSNK1E-210ENST00000442216 GPD1LQ8N335 351 aa16.35■□□□□ 0.21
CSNK1E-210ENST00000442216 KIAA0895Q8NCT3 520 aa16.35■□□□□ 0.21
CSNK1E-210ENST00000442216 HLA-CQ95604 372 aa16.35■□□□□ 0.21
CSNK1E-210ENST00000442216 PABPC5Q96DU9 382 aaKnown RBP16.35■□□□□ 0.21
CSNK1E-210ENST00000442216 PAAF1Q9BRP4 392 aa16.35■□□□□ 0.21
CSNK1E-210ENST00000442216 GTPBP4Q9BZE4 634 aaKnown RBP16.35■□□□□ 0.21
CSNK1E-210ENST00000442216 KIAA1586Q9HCI6 787 aa16.35■□□□□ 0.21
CSNK1E-210ENST00000442216 UBQLN1Q9UMX0 589 aaKnown RBP16.35■□□□□ 0.21
CSNK1E-210ENST00000442216 BRWD1Q9NSI6 2320 aa16.35■□□□□ 0.21
CSNK1E-210ENST00000442216 MTCL1Q9Y4B5 1905 aaKnown RBP16.35■□□□□ 0.21
CSNK1E-210ENST00000442216 C2orf71A6NGG8 1288 aa16.34■□□□□ 0.21
CSNK1E-210ENST00000442216 TGFB1I1O43294 461 aa16.34■□□□□ 0.21
CSNK1E-210ENST00000442216 EXTL3O43909 919 aa16.34■□□□□ 0.21
CSNK1E-210ENST00000442216 KINO60870 393 aaKnown RBP16.34■□□□□ 0.21
CSNK1E-210ENST00000442216 GADD45BO75293 160 aaPredicted RBP16.34■□□□□ 0.21
CSNK1E-210ENST00000442216 CXCL14O95715 111 aa16.34■□□□□ 0.21
CSNK1E-210ENST00000442216 CLCNKBP51801 687 aa16.34■□□□□ 0.21
CSNK1E-210ENST00000442216 SOX4Q06945 474 aaPredicted RBP16.34■□□□□ 0.21
CSNK1E-210ENST00000442216 DUSP6Q16828 381 aa16.34■□□□□ 0.21
CSNK1E-210ENST00000442216 CTC1Q2NKJ3 1217 aa16.34■□□□□ 0.21
CSNK1E-210ENST00000442216 ADGRD2Q7Z7M1 963 aa16.34■□□□□ 0.21
CSNK1E-210ENST00000442216 EFHBQ8N7U6 833 aa16.34■□□□□ 0.21
CSNK1E-210ENST00000442216 GOLGA5Q8TBA6 731 aa16.34■□□□□ 0.21
CSNK1E-210ENST00000442216 TMEM174Q8WUU8 243 aa16.34■□□□□ 0.21
CSNK1E-210ENST00000442216 KIF12Q96FN5 646 aa16.34■□□□□ 0.21
CSNK1E-210ENST00000442216 GSDMAQ96QA5 445 aa16.34■□□□□ 0.21
CSNK1E-210ENST00000442216 CBWD1Q9BRT8 395 aa16.34■□□□□ 0.21
CSNK1E-210ENST00000442216 TLE6Q9H808 572 aa16.34■□□□□ 0.21
CSNK1E-210ENST00000442216 CHST7Q9NS84 486 aa16.34■□□□□ 0.21
CSNK1E-210ENST00000442216 RMND1Q9NWS8 449 aa16.34■□□□□ 0.21
CSNK1E-210ENST00000442216 THEGQ9P2T0 379 aa16.34■□□□□ 0.21
CSNK1E-210ENST00000442216 C2CD2Q9Y426 696 aa16.34■□□□□ 0.21
CSNK1E-210ENST00000442216 SF3B1O75533 1304 aaKnown RBP eCLIP16.34■□□□□ 0.212e-6■■■■■ 43.1
CSNK1E-210ENST00000442216 HIDE1A8MVS5 230 aa16.33■□□□□ 0.2
CSNK1E-210ENST00000442216 TRAPPC3O43617 180 aa16.33■□□□□ 0.2
CSNK1E-210ENST00000442216 LILRB3O75022 631 aa16.33■□□□□ 0.2
CSNK1E-210ENST00000442216 B3GAT3O94766 335 aa16.33■□□□□ 0.2
CSNK1E-210ENST00000442216 KIF4AO95239 1232 aa16.33■□□□□ 0.2
CSNK1E-210ENST00000442216 SMC2O95347 1197 aa16.33■□□□□ 0.2
CSNK1E-210ENST00000442216 URODP06132 367 aa16.33■□□□□ 0.2
CSNK1E-210ENST00000442216 LRPAP1P30533 357 aa16.33■□□□□ 0.2
CSNK1E-210ENST00000442216 DSG1Q02413 1049 aa16.33■□□□□ 0.2
CSNK1E-210ENST00000442216 ADAM15Q13444 863 aa16.33■□□□□ 0.2
CSNK1E-210ENST00000442216 PNOCQ13519 176 aa16.33■□□□□ 0.2
CSNK1E-210ENST00000442216 AAK1Q2M2I8 961 aa16.33■□□□□ 0.2
CSNK1E-210ENST00000442216 USP41Q3LFD5 358 aa16.33■□□□□ 0.2
CSNK1E-210ENST00000442216 BRSK2Q8IWQ3 736 aa16.33■□□□□ 0.2
CSNK1E-210ENST00000442216 NELFCDQ8IXH7 590 aa16.33■□□□□ 0.2
CSNK1E-210ENST00000442216 SPATA20Q8TB22 786 aa16.33■□□□□ 0.2
CSNK1E-210ENST00000442216 ATXN2LQ8WWM7 1075 aaKnown RBP16.33■□□□□ 0.2
CSNK1E-210ENST00000442216 FBXL18Q96ME1 805 aa16.33■□□□□ 0.2
CSNK1E-210ENST00000442216 FAM213AQ9BRX8 229 aa16.33■□□□□ 0.2
CSNK1E-210ENST00000442216 GPR62Q9BZJ7 368 aa16.33■□□□□ 0.2
CSNK1E-210ENST00000442216 GOLGA2P5Q9HBQ8 144 aa16.33■□□□□ 0.2
CSNK1E-210ENST00000442216 MRPL17Q9NRX2 175 aaKnown RBP16.33■□□□□ 0.2
CSNK1E-210ENST00000442216 AGPAT3Q9NRZ7 376 aa16.33■□□□□ 0.2
CSNK1E-210ENST00000442216 CACNG4Q9UBN1 327 aa16.33■□□□□ 0.2
CSNK1E-210ENST00000442216 PCDHGC5Q9Y5F6 944 aa16.33■□□□□ 0.2
CSNK1E-210ENST00000442216 F8W810 466 aa16.32■□□□□ 0.2
CSNK1E-210ENST00000442216 PODXLO00592 558 aa16.32■□□□□ 0.2
CSNK1E-210ENST00000442216 PDXKO00764 312 aa16.32■□□□□ 0.2
CSNK1E-210ENST00000442216 CSPG5O95196 566 aa16.32■□□□□ 0.2
CSNK1E-210ENST00000442216 PAX3P23760 479 aa16.32■□□□□ 0.2
CSNK1E-210ENST00000442216 NRIP1P48552 1158 aa16.32■□□□□ 0.2
CSNK1E-210ENST00000442216 GLUD2P49448 558 aa16.32■□□□□ 0.2
CSNK1E-210ENST00000442216 CREMQ03060 361 aa16.32■□□□□ 0.2
CSNK1E-210ENST00000442216 TMEM132DQ14C87 1099 aa16.32■□□□□ 0.2
CSNK1E-210ENST00000442216 SURF1Q15526 300 aa16.32■□□□□ 0.2
CSNK1E-210ENST00000442216 PTPN14Q15678 1187 aa16.32■□□□□ 0.2
CSNK1E-210ENST00000442216 KIAA0319Q5VV43 1072 aa16.32■□□□□ 0.2
CSNK1E-210ENST00000442216 SPATA1Q5VX52 437 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms