RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 TOPORSQ9NS56 1045 aaPredicted RBP8.72□□□□□ -1.01
CCDC39-201ENST00000442201 APEX2Q9UBZ4 518 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 GTF2IRD1Q9UHL9 959 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 MYO6Q9UM54 1294 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 GPR32O75388 356 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 CCDC175P0C221 793 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 RFX1P22670 979 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 CLCN6P51797 869 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 CLDN10P78369 228 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 EPC2Q52LR7 807 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 SEZ6Q53EL9 994 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 TOGARAM2Q6ZUX3 1019 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 CDR2LQ86X02 465 aaPredicted RBP8.72□□□□□ -1.01
CCDC39-201ENST00000442201 THNSL1Q8IYQ7 743 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 FBXL13Q8NEE6 735 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 PPP2R2CQ9Y2T4 447 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 COQ4Q9Y3A0 265 aa8.72□□□□□ -1.01
CCDC39-201ENST00000442201 EPN1Q9Y6I3 576 aaPredicted RBP8.72□□□□□ -1.01
CCDC39-201ENST00000442201 USP27XA6NNY8 438 aa8.71□□□□□ -1.01
CCDC39-201ENST00000442201 FAM189A1O60320 539 aa8.71□□□□□ -1.01
CCDC39-201ENST00000442201 TSPAN1O60635 241 aa8.71□□□□□ -1.01
CCDC39-201ENST00000442201 MCF2P10911 925 aa8.71□□□□□ -1.01
CCDC39-201ENST00000442201 ARF4P18085 180 aaPredicted RBP8.71□□□□□ -1.01
CCDC39-201ENST00000442201 EIF4BP23588 611 aaKnown RBP8.71□□□□□ -1.01
CCDC39-201ENST00000442201 CYLC1P35663 651 aaPredicted RBP8.71□□□□□ -1.01
CCDC39-201ENST00000442201 PCBP1Q15365 356 aaKnown RBP eCLIP8.71□□□□□ -1.01
CCDC39-201ENST00000442201 SURF1Q15526 300 aa8.71□□□□□ -1.01
CCDC39-201ENST00000442201 CCSAPQ6IQ19 270 aaPredicted RBP8.71□□□□□ -1.01
CCDC39-201ENST00000442201 NYAP1Q6ZVC0 841 aa8.71□□□□□ -1.01
CCDC39-201ENST00000442201 CATSPER4Q7RTX7 472 aa8.71□□□□□ -1.01
CCDC39-201ENST00000442201 CCDC170Q8IYT3 715 aa8.71□□□□□ -1.01
CCDC39-201ENST00000442201 LMO3Q8TAP4 145 aa8.71□□□□□ -1.01
CCDC39-201ENST00000442201 CCDC42Q96M95 316 aa8.71□□□□□ -1.01
CCDC39-201ENST00000442201 OSMRQ99650 979 aa8.71□□□□□ -1.01
CCDC39-201ENST00000442201 ADPGKQ9BRR6 497 aa8.71□□□□□ -1.01
CCDC39-201ENST00000442201 DESI2Q9BSY9 194 aa8.71□□□□□ -1.01
CCDC39-201ENST00000442201 TSKSQ9UJT2 592 aa8.71□□□□□ -1.01
CCDC39-201ENST00000442201 DNAJC12Q9UKB3 198 aa8.71□□□□□ -1.01
CCDC39-201ENST00000442201 CPSF3Q9UKF6 684 aaKnown RBP8.71□□□□□ -1.01
CCDC39-201ENST00000442201 THSD7BQ9C0I4 1608 aa8.71□□□□□ -1.01
CCDC39-201ENST00000442201 NDUFA10O95299 355 aa8.71□□□□□ -1.02
CCDC39-201ENST00000442201 DARSP14868 501 aaKnown RBP8.71□□□□□ -1.02
CCDC39-201ENST00000442201 TNFSF9P41273 254 aa8.71□□□□□ -1.02
CCDC39-201ENST00000442201 SLC9C1Q4G0N8 1177 aa8.71□□□□□ -1.02
CCDC39-201ENST00000442201 TDRD12Q587J7 1177 aaKnown RBP8.71□□□□□ -1.02
CCDC39-201ENST00000442201 IQCEQ6IPM2 695 aa8.71□□□□□ -1.02
CCDC39-201ENST00000442201 DNAJC14Q6Y2X3 702 aaPredicted RBP8.71□□□□□ -1.02
CCDC39-201ENST00000442201 PPP1R13BQ96KQ4 1090 aa8.71□□□□□ -1.02
CCDC39-201ENST00000442201 CGRRF1Q99675 332 aa8.71□□□□□ -1.02
CCDC39-201ENST00000442201 PDZD7Q9H5P4 517 aa8.71□□□□□ -1.02
CCDC39-201ENST00000442201 NHEJ1Q9H9Q4 299 aaPredicted RBP8.71□□□□□ -1.02
CCDC39-201ENST00000442201 RAB20Q9NX57 234 aa8.71□□□□□ -1.02
CCDC39-201ENST00000442201 AIPL1Q9NZN9 384 aa8.71□□□□□ -1.02
CCDC39-201ENST00000442201 ADGRG1Q9Y653 693 aa8.71□□□□□ -1.02
CCDC39-201ENST00000442201 PTCH2Q9Y6C5 1203 aa8.71□□□□□ -1.02
CCDC39-201ENST00000442201 GOLGA6L9A6NEM1 432 aa8.71□□□□□ -1.02
CCDC39-201ENST00000442201 CABYRO75952 493 aa8.71□□□□□ -1.02
CCDC39-201ENST00000442201 FAM163BP0C2L3 166 aa8.71□□□□□ -1.02
CCDC39-201ENST00000442201 AP3M2P53677 418 aa8.71□□□□□ -1.02
CCDC39-201ENST00000442201 BIRC3Q13489 604 aa8.71□□□□□ -1.02
CCDC39-201ENST00000442201 ASIC2Q16515 512 aa8.71□□□□□ -1.02
CCDC39-201ENST00000442201 KYAT1Q16773 422 aa8.71□□□□□ -1.02
CCDC39-201ENST00000442201 GJB7Q6PEY0 223 aa8.71□□□□□ -1.02
CCDC39-201ENST00000442201 APBB1IPQ7Z5R6 666 aaPredicted RBP8.71□□□□□ -1.02
CCDC39-201ENST00000442201 RSPH3Q86UC2 560 aa8.71□□□□□ -1.02
CCDC39-201ENST00000442201 FMNL3Q8IVF7 1028 aa8.71□□□□□ -1.02
CCDC39-201ENST00000442201 TAS1R2Q8TE23 839 aa8.71□□□□□ -1.02
CCDC39-201ENST00000442201 VTI1AQ96AJ9 217 aa8.71□□□□□ -1.02
CCDC39-201ENST00000442201 CPB2Q96IY4 423 aa8.71□□□□□ -1.02
CCDC39-201ENST00000442201 STK33Q9BYT3 514 aa8.71□□□□□ -1.02
CCDC39-201ENST00000442201 CDHR5Q9HBB8 845 aa8.71□□□□□ -1.02
CCDC39-201ENST00000442201 ARHGAP20Q9P2F6 1191 aa8.71□□□□□ -1.02
CCDC39-201ENST00000442201 A0A1B0GUA9 196 aa8.7□□□□□ -1.02
CCDC39-201ENST00000442201 SLU7O95391 586 aaKnown RBP8.7□□□□□ -1.02
CCDC39-201ENST00000442201 SERPING1P05155 500 aa8.7□□□□□ -1.02
CCDC39-201ENST00000442201 RPLP2P05387 115 aaKnown RBP8.7□□□□□ -1.02
CCDC39-201ENST00000442201 CLTAP09496 248 aa8.7□□□□□ -1.02
CCDC39-201ENST00000442201 FGFR4P22455 802 aa8.7□□□□□ -1.02
CCDC39-201ENST00000442201 STAT1P42224 750 aa8.7□□□□□ -1.02
CCDC39-201ENST00000442201 CRYBB1P53674 252 aaPredicted RBP8.7□□□□□ -1.02
CCDC39-201ENST00000442201 WNT7BP56706 349 aa8.7□□□□□ -1.02
CCDC39-201ENST00000442201 OSTNP61366 133 aa8.7□□□□□ -1.02
CCDC39-201ENST00000442201 ZACNQ401N2 412 aa8.7□□□□□ -1.02
CCDC39-201ENST00000442201 LMBRD2Q68DH5 695 aaPredicted RBP8.7□□□□□ -1.02
CCDC39-201ENST00000442201 GDF6Q6KF10 455 aaPredicted RBP8.7□□□□□ -1.02
CCDC39-201ENST00000442201 PHLDB3Q6NSJ2 640 aa8.7□□□□□ -1.02
CCDC39-201ENST00000442201 C15orf39Q6ZRI6 1047 aa8.7□□□□□ -1.02
CCDC39-201ENST00000442201 SESTD1Q86VW0 696 aa8.7□□□□□ -1.02
CCDC39-201ENST00000442201 KLHL23Q8NBE8 558 aa8.7□□□□□ -1.02
CCDC39-201ENST00000442201 ZNF516Q92618 1163 aa8.7□□□□□ -1.02
CCDC39-201ENST00000442201 C16orf45Q96MC5 204 aaPredicted RBP8.7□□□□□ -1.02
CCDC39-201ENST00000442201 L2HGDHQ9H9P8 463 aa8.7□□□□□ -1.02
CCDC39-201ENST00000442201 RPF1Q9H9Y2 349 aaKnown RBP8.7□□□□□ -1.02
CCDC39-201ENST00000442201 SIP14410 1827 aa8.7□□□□□ -1.02
CCDC39-201ENST00000442201 SSU72P8A0A1W2PR75 194 aa8.7□□□□□ -1.02
CCDC39-201ENST00000442201 M0QZ92 97 aa8.7□□□□□ -1.02
CCDC39-201ENST00000442201 PAX7P23759 505 aa8.7□□□□□ -1.02
CCDC39-201ENST00000442201 ACLYP53396 1101 aa8.7□□□□□ -1.02
CCDC39-201ENST00000442201 POU5F1Q01860 360 aaKnown RBP8.7□□□□□ -1.02
CCDC39-201ENST00000442201 ARID5AQ03989 594 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms