RNA–Protein interactions for RNA: ENST00000440647.1

CHD6-204, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 3

Gene CHD6, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-204ENST00000440647 ANKRD35Q8N283 1001 aa6.96□□□□□ -1.3
CHD6-204ENST00000440647 KBTBD3Q8NAB2 608 aa6.96□□□□□ -1.3
CHD6-204ENST00000440647 BVESQ8NE79 360 aa6.96□□□□□ -1.3
CHD6-204ENST00000440647 NUP133Q8WUM0 1156 aa6.96□□□□□ -1.3
CHD6-204ENST00000440647 STRBPQ96SI9 672 aaKnown RBP6.96□□□□□ -1.3
CHD6-204ENST00000440647 NUP88Q99567 741 aaPredicted RBP6.96□□□□□ -1.3
CHD6-204ENST00000440647 SGPP1Q9BX95 441 aa6.96□□□□□ -1.3
CHD6-204ENST00000440647 NACAP1Q9BZK3 213 aa6.96□□□□□ -1.3
CHD6-204ENST00000440647 TNFRSF12AQ9NP84 129 aa6.96□□□□□ -1.3
CHD6-204ENST00000440647 STARD7Q9NQZ5 370 aa6.96□□□□□ -1.3
CHD6-204ENST00000440647 PDLIM7Q9NR12 457 aa6.96□□□□□ -1.3
CHD6-204ENST00000440647 SIRT5Q9NXA8 310 aa6.96□□□□□ -1.3
CHD6-204ENST00000440647 NYAP2Q9P242 653 aa6.96□□□□□ -1.3
CHD6-204ENST00000440647 CLIP2Q9UDT6 1046 aa6.96□□□□□ -1.3
CHD6-204ENST00000440647 ZHX1Q9UKY1 873 aaPredicted RBP6.96□□□□□ -1.3
CHD6-204ENST00000440647 ADAMTS5Q9UNA0 930 aa6.96□□□□□ -1.3
CHD6-204ENST00000440647 EMC9Q9Y3B6 208 aa6.96□□□□□ -1.3
CHD6-204ENST00000440647 BACE2Q9Y5Z0 518 aa6.96□□□□□ -1.3
CHD6-204ENST00000440647 SMCHD1A6NHR9 2005 aa6.95□□□□□ -1.3
CHD6-204ENST00000440647 GSG1L2A8MUP6 293 aa6.95□□□□□ -1.3
CHD6-204ENST00000440647 F5H6K3 240 aa6.95□□□□□ -1.3
CHD6-204ENST00000440647 STXBP3O00186 592 aa6.95□□□□□ -1.3
CHD6-204ENST00000440647 ERC2O15083 957 aa6.95□□□□□ -1.3
CHD6-204ENST00000440647 CREB3O43889 395 aa6.95□□□□□ -1.3
CHD6-204ENST00000440647 PRDM1O75626 825 aa6.95□□□□□ -1.3
CHD6-204ENST00000440647 NDUFB10O96000 172 aa6.95□□□□□ -1.3
CHD6-204ENST00000440647 MSL3P1P0C860 447 aa6.95□□□□□ -1.3
CHD6-204ENST00000440647 TSPY3P0CV98 308 aa6.95□□□□□ -1.3
CHD6-204ENST00000440647 TSPY8P0CW00 308 aa6.95□□□□□ -1.3
CHD6-204ENST00000440647 L1CAMP32004 1257 aa6.95□□□□□ -1.3
CHD6-204ENST00000440647 VIPR1P32241 457 aa6.95□□□□□ -1.3
CHD6-204ENST00000440647 SEPHS1P49903 392 aa6.95□□□□□ -1.3
CHD6-204ENST00000440647 CORO7P57737 925 aa6.95□□□□□ -1.3
CHD6-204ENST00000440647 TLE2Q04725 743 aa6.95□□□□□ -1.3
CHD6-204ENST00000440647 KLRC3Q07444 240 aa6.95□□□□□ -1.3
CHD6-204ENST00000440647 TMEM62Q0P6H9 643 aa6.95□□□□□ -1.3
CHD6-204ENST00000440647 IKQ13123 557 aaPredicted RBP6.95□□□□□ -1.3
CHD6-204ENST00000440647 CBX2Q14781 532 aaPredicted RBP6.95□□□□□ -1.3
CHD6-204ENST00000440647 SHHQ15465 462 aa6.95□□□□□ -1.3
CHD6-204ENST00000440647 C9orf50Q5SZB4 431 aa6.95□□□□□ -1.3
CHD6-204ENST00000440647 TSHZ3Q63HK5 1081 aa6.95□□□□□ -1.3
CHD6-204ENST00000440647 POMZP3Q6PJE2 187 aa6.95□□□□□ -1.3
CHD6-204ENST00000440647 C6orf15Q6UXA7 325 aaPredicted RBP6.95□□□□□ -1.3
CHD6-204ENST00000440647 MCF2L2Q86YR7 1114 aa6.95□□□□□ -1.3
CHD6-204ENST00000440647 FAM178BQ8IXR5 827 aa6.95□□□□□ -1.3
CHD6-204ENST00000440647 CNPY4Q8N129 248 aa6.95□□□□□ -1.3
CHD6-204ENST00000440647 LRRC47Q8N1G4 583 aaKnown RBP6.95□□□□□ -1.3
CHD6-204ENST00000440647 MSL3Q8N5Y2 521 aaKnown RBP6.95□□□□□ -1.3
CHD6-204ENST00000440647 PRPF38AQ8NAV1 312 aaKnown RBP6.95□□□□□ -1.3
CHD6-204ENST00000440647 RNPC3Q96LT9 517 aaKnown RBP6.95□□□□□ -1.3
CHD6-204ENST00000440647 NAPBQ9H115 298 aa6.95□□□□□ -1.3
CHD6-204ENST00000440647 SPC25Q9HBM1 224 aa6.95□□□□□ -1.3
CHD6-204ENST00000440647 FBXO40Q9UH90 709 aa6.95□□□□□ -1.3
CHD6-204ENST00000440647 MBD1Q9UIS9 605 aaPredicted RBP6.95□□□□□ -1.3
CHD6-204ENST00000440647 FEM1BQ9UK73 627 aa6.95□□□□□ -1.3
CHD6-204ENST00000440647 FAM184BQ9ULE4 1060 aa6.95□□□□□ -1.3
CHD6-204ENST00000440647 FAN1Q9Y2M0 1017 aa6.95□□□□□ -1.3
CHD6-204ENST00000440647 MROH7Q68CQ1 1323 aa6.95□□□□□ -1.3
CHD6-204ENST00000440647 SYNRGQ9UMZ2 1314 aa6.95□□□□□ -1.3
CHD6-204ENST00000440647 TRIM43BA6NCK2 446 aa6.94□□□□□ -1.3
CHD6-204ENST00000440647 M0R2C6 588 aa6.94□□□□□ -1.3
CHD6-204ENST00000440647 NOP56O00567 594 aaKnown RBP6.94□□□□□ -1.3
CHD6-204ENST00000440647 KCNH1O95259 989 aa6.94□□□□□ -1.3
CHD6-204ENST00000440647 TTLL1O95922 423 aa6.94□□□□□ -1.3
CHD6-204ENST00000440647 C6orf222P0C671 652 aaPredicted RBP6.94□□□□□ -1.3
CHD6-204ENST00000440647 DNAJA1P31689 397 aaKnown RBP6.94□□□□□ -1.3
CHD6-204ENST00000440647 ACLYP53396 1101 aa6.94□□□□□ -1.3
CHD6-204ENST00000440647 SMAD3P84022 425 aaKnown RBP6.94□□□□□ -1.3
CHD6-204ENST00000440647 FPGSQ05932 587 aa6.94□□□□□ -1.3
CHD6-204ENST00000440647 NR1I3Q14994 352 aa6.94□□□□□ -1.3
CHD6-204ENST00000440647 FXNQ16595 210 aa6.94□□□□□ -1.3
CHD6-204ENST00000440647 C20orf194Q5TEA3 1177 aa6.94□□□□□ -1.3
CHD6-204ENST00000440647 LARP1BQ659C4 914 aaKnown RBP6.94□□□□□ -1.3
CHD6-204ENST00000440647 IFNL3Q8IZI9 196 aa6.94□□□□□ -1.3
CHD6-204ENST00000440647 PCSK9Q8NBP7 692 aaKnown RBP6.94□□□□□ -1.3
CHD6-204ENST00000440647 REPS2Q8NFH8 660 aa6.94□□□□□ -1.3
CHD6-204ENST00000440647 OSBP2Q969R2 916 aa6.94□□□□□ -1.3
CHD6-204ENST00000440647 TRIM43Q96BQ3 446 aaPredicted RBP6.94□□□□□ -1.3
CHD6-204ENST00000440647 CEP95Q96GE4 821 aa6.94□□□□□ -1.3
CHD6-204ENST00000440647 GLT1D1Q96MS3 346 aa6.94□□□□□ -1.3
CHD6-204ENST00000440647 GUCD1Q96NT3 240 aa6.94□□□□□ -1.3
CHD6-204ENST00000440647 FSD1Q9BTV5 496 aa6.94□□□□□ -1.3
CHD6-204ENST00000440647 RAVER2Q9HCJ3 691 aaKnown RBP6.94□□□□□ -1.3
CHD6-204ENST00000440647 EPB41L4AQ9HCS5 686 aaPredicted RBP6.94□□□□□ -1.3
CHD6-204ENST00000440647 MCM3APO60318 1980 aa6.94□□□□□ -1.3
CHD6-204ENST00000440647 RANBP2P49792 3224 aaKnown RBP6.94□□□□□ -1.3
CHD6-204ENST00000440647 TTC41PQ6P2S7 1318 aa6.94□□□□□ -1.3
CHD6-204ENST00000440647 A0A1W2PQJ5 194 aa6.93□□□□□ -1.3
CHD6-204ENST00000440647 NUDT19A8MXV4 375 aa6.93□□□□□ -1.3
CHD6-204ENST00000440647 PRRG2O14669 202 aa6.93□□□□□ -1.3
CHD6-204ENST00000440647 ATP2A1O14983 1001 aa6.93□□□□□ -1.3
CHD6-204ENST00000440647 DUSP11O75319 330 aaKnown RBP6.93□□□□□ -1.3
CHD6-204ENST00000440647 STAT2P52630 851 aa6.93□□□□□ -1.3
CHD6-204ENST00000440647 OAZ1P54368 228 aa6.93□□□□□ -1.3
CHD6-204ENST00000440647 LINC00310P59036 64 aa6.93□□□□□ -1.3
CHD6-204ENST00000440647 ACVR2BQ13705 512 aa6.93□□□□□ -1.3
CHD6-204ENST00000440647 SLFN13Q68D06 897 aa6.93□□□□□ -1.3
CHD6-204ENST00000440647 CCDC174Q6PII3 467 aa6.93□□□□□ -1.3
CHD6-204ENST00000440647 MAMDC4Q6UXC1 1216 aa6.93□□□□□ -1.3
CHD6-204ENST00000440647 FAM160B2Q86V87 743 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms