RNA–Protein interactions for RNA: ENST00000440126.7

APP-209, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 2,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-209ENST00000440126 PRPF31Q8WWY3 499 aaKnown RBP8.47□□□□□ -1.05
APP-209ENST00000440126 SLC7A3Q8WY07 619 aa8.47□□□□□ -1.05
APP-209ENST00000440126 RFFLQ8WZ73 363 aa8.47□□□□□ -1.05
APP-209ENST00000440126 KIFAP3Q92845 792 aa8.47□□□□□ -1.05
APP-209ENST00000440126 UPF1Q92900 1129 aaKnown RBP eCLIP8.47□□□□□ -1.05
APP-209ENST00000440126 ARL8AQ96BM9 186 aa8.47□□□□□ -1.05
APP-209ENST00000440126 ZNF653Q96CK0 615 aa8.47□□□□□ -1.05
APP-209ENST00000440126 RPGRIP1Q96KN7 1286 aa8.47□□□□□ -1.05
APP-209ENST00000440126 NT5C1BQ96P26 610 aa8.47□□□□□ -1.05
APP-209ENST00000440126 FNBP1Q96RU3 617 aa8.47□□□□□ -1.05
APP-209ENST00000440126 MSTO1Q9BUK6 570 aa8.47□□□□□ -1.05
APP-209ENST00000440126 YIPF2Q9BWQ6 316 aa8.47□□□□□ -1.05
APP-209ENST00000440126 ADARB2Q9NS39 739 aaKnown RBP8.47□□□□□ -1.05
APP-209ENST00000440126 EXOC7Q9UPT5 735 aa8.47□□□□□ -1.05
APP-209ENST00000440126 CLEC11AQ9Y240 323 aa8.47□□□□□ -1.05
APP-209ENST00000440126 ALG6Q9Y672 507 aa8.47□□□□□ -1.05
APP-209ENST00000440126 O00370 1275 aa8.47□□□□□ -1.05
APP-209ENST00000440126 B4GALT5O43286 388 aa8.47□□□□□ -1.05
APP-209ENST00000440126 SART1O43290 800 aaKnown RBP8.47□□□□□ -1.05
APP-209ENST00000440126 DAPK3O43293 454 aa8.47□□□□□ -1.05
APP-209ENST00000440126 PPFIA4O75335 1185 aa8.47□□□□□ -1.05
APP-209ENST00000440126 CNMDO75829 334 aa8.47□□□□□ -1.05
APP-209ENST00000440126 SNUPNO95149 360 aaKnown RBP8.47□□□□□ -1.05
APP-209ENST00000440126 CYP11B1P15538 503 aa8.47□□□□□ -1.05
APP-209ENST00000440126 COMTP21964 271 aa8.47□□□□□ -1.05
APP-209ENST00000440126 PIK3CAP42336 1068 aa8.47□□□□□ -1.05
APP-209ENST00000440126 CLCN3P51790 818 aa8.47□□□□□ -1.05
APP-209ENST00000440126 STRN3Q13033 797 aa8.47□□□□□ -1.05
APP-209ENST00000440126 CAPSQ13938 189 aa8.47□□□□□ -1.05
APP-209ENST00000440126 KIF22Q14807 665 aa8.47□□□□□ -1.05
APP-209ENST00000440126 PDCD2Q16342 344 aaPredicted RBP8.47□□□□□ -1.05
APP-209ENST00000440126 TDRD10Q5VZ19 366 aaKnown RBP8.47□□□□□ -1.05
APP-209ENST00000440126 MAP1SQ66K74 1059 aaPredicted RBP8.47□□□□□ -1.05
APP-209ENST00000440126 MYLK4Q86YV6 388 aaPredicted RBP8.47□□□□□ -1.05
APP-209ENST00000440126 THNSL1Q8IYQ7 743 aa8.47□□□□□ -1.05
APP-209ENST00000440126 UHMK1Q8TAS1 419 aaKnown RBP8.47□□□□□ -1.05
APP-209ENST00000440126 APOBEC3GQ9HC16 384 aaKnown RBP8.47□□□□□ -1.05
APP-209ENST00000440126 LRRC4CQ9HCJ2 640 aa8.47□□□□□ -1.05
APP-209ENST00000440126 PDLIM7Q9NR12 457 aa8.47□□□□□ -1.05
APP-209ENST00000440126 MAP3K20Q9NYL2 800 aaKnown RBP8.47□□□□□ -1.05
APP-209ENST00000440126 RBPJLQ9UBG7 517 aa8.47□□□□□ -1.05
APP-209ENST00000440126 NOCTQ9UK39 431 aaKnown RBP8.47□□□□□ -1.05
APP-209ENST00000440126 FBXL5Q9UKA1 691 aa8.47□□□□□ -1.05
APP-209ENST00000440126 AGO2Q9UKV8 859 aaKnown RBP8.47□□□□□ -1.05
APP-209ENST00000440126 ARID2Q68CP9 1835 aa8.47□□□□□ -1.05
APP-209ENST00000440126 LOXHD1Q8IVV2 1947 aa8.47□□□□□ -1.05
APP-209ENST00000440126 TARSL2A2RTX5 802 aaKnown RBP8.46□□□□□ -1.05
APP-209ENST00000440126 ZNF233A6NK53 670 aa8.46□□□□□ -1.05
APP-209ENST00000440126 PGRMC1O00264 195 aaKnown RBP8.46□□□□□ -1.05
APP-209ENST00000440126 NOP56O00567 594 aaKnown RBP8.46□□□□□ -1.05
APP-209ENST00000440126 HLA-DRAP01903 254 aa8.46□□□□□ -1.05
APP-209ENST00000440126 TMEM253P0C7T8 217 aa8.46□□□□□ -1.05
APP-209ENST00000440126 GJA5P36382 358 aa8.46□□□□□ -1.05
APP-209ENST00000440126 LIG3P49916 1009 aa8.46□□□□□ -1.05
APP-209ENST00000440126 OAZ1P54368 228 aa8.46□□□□□ -1.05
APP-209ENST00000440126 PREPLQ4J6C6 727 aaPredicted RBP8.46□□□□□ -1.05
APP-209ENST00000440126 CRELD2Q6UXH1 353 aaPredicted RBP8.46□□□□□ -1.05
APP-209ENST00000440126 RHPN2Q8IUC4 686 aa8.46□□□□□ -1.05
APP-209ENST00000440126 KCTD17Q8N5Z5 321 aa8.46□□□□□ -1.05
APP-209ENST00000440126 RNF149Q8NC42 400 aa8.46□□□□□ -1.05
APP-209ENST00000440126 MCPH1Q8NEM0 835 aa8.46□□□□□ -1.05
APP-209ENST00000440126 RNPC3Q96LT9 517 aaKnown RBP8.46□□□□□ -1.05
APP-209ENST00000440126 SYT17Q9BSW7 474 aa8.46□□□□□ -1.05
APP-209ENST00000440126 NUP85Q9BW27 656 aa8.46□□□□□ -1.05
APP-209ENST00000440126 KLHL11Q9NVR0 708 aa8.46□□□□□ -1.05
APP-209ENST00000440126 RBAKQ9NYW8 714 aaPredicted RBP8.46□□□□□ -1.05
APP-209ENST00000440126 ARHGAP28Q9P2N2 729 aa8.46□□□□□ -1.05
APP-209ENST00000440126 GINS2Q9Y248 185 aa8.46□□□□□ -1.05
APP-209ENST00000440126 STXBP5LQ9Y2K9 1186 aa8.46□□□□□ -1.05
APP-209ENST00000440126 OTOFQ9HC10 1997 aa8.46□□□□□ -1.05
APP-209ENST00000440126 WDR90Q96KV7 1748 aa8.46□□□□□ -1.06
APP-209ENST00000440126 SBF1O95248 1867 aa8.46□□□□□ -1.06
APP-209ENST00000440126 DDX3YO15523 660 aaKnown RBP8.46□□□□□ -1.06
APP-209ENST00000440126 ZBTB48P10074 688 aaPredicted RBP8.46□□□□□ -1.06
APP-209ENST00000440126 MAGEA8P43361 318 aa8.46□□□□□ -1.06
APP-209ENST00000440126 KCNJ1P48048 391 aa8.46□□□□□ -1.06
APP-209ENST00000440126 IREB2P48200 963 aaKnown RBP8.46□□□□□ -1.06
APP-209ENST00000440126 ATP1A2P50993 1020 aa8.46□□□□□ -1.06
APP-209ENST00000440126 UBAP2Q5T6F2 1119 aaKnown RBP8.46□□□□□ -1.06
APP-209ENST00000440126 TMEM270Q6UE05 265 aa8.46□□□□□ -1.06
APP-209ENST00000440126 ZDHHC14Q8IZN3 488 aa8.46□□□□□ -1.06
APP-209ENST00000440126 SAMD3Q8N6K7 520 aa8.46□□□□□ -1.06
APP-209ENST00000440126 DRAXINQ8NBI3 349 aaPredicted RBP8.46□□□□□ -1.06
APP-209ENST00000440126 FGD4Q96M96 766 aa8.46□□□□□ -1.06
APP-209ENST00000440126 SPON1Q9HCB6 807 aa8.46□□□□□ -1.06
APP-209ENST00000440126 TMEM8AQ9HCN3 771 aa8.46□□□□□ -1.06
APP-209ENST00000440126 GINM1Q9NU53 330 aa8.46□□□□□ -1.06
APP-209ENST00000440126 TRPC6Q9Y210 931 aa8.46□□□□□ -1.06
APP-209ENST00000440126 PTPN22Q9Y2R2 807 aa8.46□□□□□ -1.06
APP-209ENST00000440126 ANKRD62A6NC57 917 aa8.45□□□□□ -1.06
APP-209ENST00000440126 VNN1O95497 513 aa8.45□□□□□ -1.06
APP-209ENST00000440126 FDX1P10109 184 aa8.45□□□□□ -1.06
APP-209ENST00000440126 PPATQ06203 517 aa8.45□□□□□ -1.06
APP-209ENST00000440126 ALCAMQ13740 583 aa8.45□□□□□ -1.06
APP-209ENST00000440126 NOL9Q5SY16 702 aaKnown RBP8.45□□□□□ -1.06
APP-209ENST00000440126 TMEM192Q8IY95 271 aa8.45□□□□□ -1.06
APP-209ENST00000440126 FAM71AQ8IYT1 594 aa8.45□□□□□ -1.06
APP-209ENST00000440126 C18orf8Q96DM3 657 aa8.45□□□□□ -1.06
APP-209ENST00000440126 SPATA33Q96N06 139 aa8.45□□□□□ -1.06
APP-209ENST00000440126 ZIM3Q96PE6 472 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms