RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 PLXNB2O15031 1838 aa16.2■□□□□ 0.18
CPSF7-205ENST00000439958 MYADML2A6NDP7 307 aa16.2■□□□□ 0.18
CPSF7-205ENST00000439958 FAM155AB1AL88 458 aaPredicted RBP16.2■□□□□ 0.18
CPSF7-205ENST00000439958 GPR25O00155 361 aa16.2■□□□□ 0.18
CPSF7-205ENST00000439958 P4HA2O15460 535 aa16.2■□□□□ 0.18
CPSF7-205ENST00000439958 CST3P01034 146 aaPredicted RBP16.2■□□□□ 0.18
CPSF7-205ENST00000439958 ZNF865P0CJ78 1059 aaPredicted RBP16.2■□□□□ 0.18
CPSF7-205ENST00000439958 BMS1Q14692 1282 aaKnown RBP16.2■□□□□ 0.18
CPSF7-205ENST00000439958 NAB2Q15742 525 aa16.2■□□□□ 0.18
CPSF7-205ENST00000439958 TAF4BQ92750 862 aa16.2■□□□□ 0.18
CPSF7-205ENST00000439958 SPC25Q9HBM1 224 aa16.2■□□□□ 0.18
CPSF7-205ENST00000439958 STAG3L1P0CL83 205 aa16.19■□□□□ 0.18
CPSF7-205ENST00000439958 CD19P15391 556 aa16.19■□□□□ 0.18
CPSF7-205ENST00000439958 DUOXA2Q1HG44 320 aa16.19■□□□□ 0.18
CPSF7-205ENST00000439958 NOP9Q86U38 636 aaKnown RBP16.19■□□□□ 0.18
CPSF7-205ENST00000439958 GPR88Q9GZN0 384 aa16.19■□□□□ 0.18
CPSF7-205ENST00000439958 THAP2Q9H0W7 228 aa16.19■□□□□ 0.18
CPSF7-205ENST00000439958 IGKV6-21A0A0C4DH24 114 aa16.19■□□□□ 0.18
CPSF7-205ENST00000439958 KIF3CO14782 793 aa16.19■□□□□ 0.18
CPSF7-205ENST00000439958 ASAP2O43150 1006 aa16.19■□□□□ 0.18
CPSF7-205ENST00000439958 TRAPPC11Q7Z392 1133 aa16.19■□□□□ 0.18
CPSF7-205ENST00000439958 GOLGA1Q92805 767 aa16.19■□□□□ 0.18
CPSF7-205ENST00000439958 TSKSQ9UJT2 592 aa16.19■□□□□ 0.18
CPSF7-205ENST00000439958 PIN4Q9Y237 131 aaKnown RBP16.19■□□□□ 0.18
CPSF7-205ENST00000439958 ZACNQ401N2 412 aa16.19■□□□□ 0.18
CPSF7-205ENST00000439958 RUFY4Q6ZNE9 571 aa16.19■□□□□ 0.18
CPSF7-205ENST00000439958 RNF169Q8NCN4 708 aa16.19■□□□□ 0.18
CPSF7-205ENST00000439958 COG1Q8WTW3 980 aa16.19■□□□□ 0.18
CPSF7-205ENST00000439958 TRIB2Q92519 343 aa16.19■□□□□ 0.18
CPSF7-205ENST00000439958 ANKRD36BP1Q96IX9 119 aa16.19■□□□□ 0.18
CPSF7-205ENST00000439958 MMS19Q96T76 1030 aa16.19■□□□□ 0.18
CPSF7-205ENST00000439958 NPTXRO95502 500 aa16.18■□□□□ 0.18
CPSF7-205ENST00000439958 AKR1A1P14550 325 aa16.18■□□□□ 0.18
CPSF7-205ENST00000439958 PSEN2P49810 448 aa16.18■□□□□ 0.18
CPSF7-205ENST00000439958 WDR72Q3MJ13 1102 aa16.18■□□□□ 0.18
CPSF7-205ENST00000439958 BRSK2Q8IWQ3 736 aa16.18■□□□□ 0.18
CPSF7-205ENST00000439958 MS4A14Q96JA4 679 aa16.18■□□□□ 0.18
CPSF7-205ENST00000439958 CGRRF1Q99675 332 aa16.18■□□□□ 0.18
CPSF7-205ENST00000439958 KLK14Q9P0G3 267 aa16.18■□□□□ 0.18
CPSF7-205ENST00000439958 NOD1Q9Y239 953 aa16.18■□□□□ 0.18
CPSF7-205ENST00000439958 JRKLQ9Y4A0 524 aa16.18■□□□□ 0.18
CPSF7-205ENST00000439958 KCNK3O14649 394 aa16.18■□□□□ 0.18
CPSF7-205ENST00000439958 NFICP08651 508 aa16.18■□□□□ 0.18
CPSF7-205ENST00000439958 SSR1P43307 286 aaKnown RBP16.18■□□□□ 0.18
CPSF7-205ENST00000439958 LACTBP83111 547 aaPredicted RBP16.18■□□□□ 0.18
CPSF7-205ENST00000439958 ZNF699Q32M78 642 aa16.18■□□□□ 0.18
CPSF7-205ENST00000439958 HELQQ8TDG4 1101 aa16.18■□□□□ 0.18
CPSF7-205ENST00000439958 CPA5Q8WXQ8 436 aa16.18■□□□□ 0.18
CPSF7-205ENST00000439958 NUB1Q9Y5A7 615 aa16.18■□□□□ 0.18
CPSF7-205ENST00000439958 PASKQ96RG2 1323 aa16.18■□□□□ 0.18
CPSF7-205ENST00000439958 MAPK13O15264 365 aa16.18■□□□□ 0.18
CPSF7-205ENST00000439958 THAP12O43422 761 aa16.18■□□□□ 0.18
CPSF7-205ENST00000439958 ZMYND10O75800 440 aa16.18■□□□□ 0.18
CPSF7-205ENST00000439958 RAP1GAPP47736 663 aa16.18■□□□□ 0.18
CPSF7-205ENST00000439958 PEX26Q7Z412 305 aa16.18■□□□□ 0.18
CPSF7-205ENST00000439958 ADAT2Q7Z6V5 191 aaKnown RBP16.18■□□□□ 0.18
CPSF7-205ENST00000439958 CEP112Q8N8E3 955 aa16.18■□□□□ 0.18
CPSF7-205ENST00000439958 GCOM2Q9BZD3 368 aaPredicted RBP16.18■□□□□ 0.18
CPSF7-205ENST00000439958 CYP11B1P15538 503 aa16.17■□□□□ 0.18
CPSF7-205ENST00000439958 NOGQ13253 232 aa16.17■□□□□ 0.18
CPSF7-205ENST00000439958 MARCH8Q5T0T0 291 aa16.17■□□□□ 0.18
CPSF7-205ENST00000439958 ZFYVE27Q5T4F4 411 aa16.17■□□□□ 0.18
CPSF7-205ENST00000439958 ZNF710Q8N1W2 664 aa16.17■□□□□ 0.18
CPSF7-205ENST00000439958 EPS8L1Q8TE68 723 aa16.17■□□□□ 0.18
CPSF7-205ENST00000439958 CCDC113Q9H0I3 377 aa16.17■□□□□ 0.18
CPSF7-205ENST00000439958 FBXL5Q9UKA1 691 aa16.17■□□□□ 0.18
CPSF7-205ENST00000439958 GJD2Q9UKL4 321 aa16.17■□□□□ 0.18
CPSF7-205ENST00000439958 RBM47A0AV96 593 aaKnown RBP16.17■□□□□ 0.18
CPSF7-205ENST00000439958 A6NJR5 290 aa16.17■□□□□ 0.18
CPSF7-205ENST00000439958 VNN1O95497 513 aa16.17■□□□□ 0.18
CPSF7-205ENST00000439958 ITGB3P05106 788 aa16.17■□□□□ 0.18
CPSF7-205ENST00000439958 RARBP10826 455 aa16.17■□□□□ 0.18
CPSF7-205ENST00000439958 PRKCIP41743 596 aa16.17■□□□□ 0.18
CPSF7-205ENST00000439958 C2orf54Q08AI8 447 aa16.17■□□□□ 0.18
CPSF7-205ENST00000439958 CDCA2Q69YH5 1023 aaPredicted RBP16.17■□□□□ 0.18
CPSF7-205ENST00000439958 SRGAP1Q7Z6B7 1085 aa16.17■□□□□ 0.18
CPSF7-205ENST00000439958 FZD8Q9H461 694 aa16.17■□□□□ 0.18
CPSF7-205ENST00000439958 APOBEC3GQ9HC16 384 aaKnown RBP16.17■□□□□ 0.18
CPSF7-205ENST00000439958 PARP2Q9UGN5 583 aa16.17■□□□□ 0.18
CPSF7-205ENST00000439958 GNEQ9Y223 722 aaKnown RBP16.17■□□□□ 0.18
CPSF7-205ENST00000439958 C4BPAP04003 597 aaKnown RBP16.16■□□□□ 0.18
CPSF7-205ENST00000439958 AKAP5P24588 427 aa16.16■□□□□ 0.18
CPSF7-205ENST00000439958 MESDQ14696 234 aa16.16■□□□□ 0.18
CPSF7-205ENST00000439958 KAT2BQ92831 832 aa16.16■□□□□ 0.18
CPSF7-205ENST00000439958 ZNF653Q96CK0 615 aa16.16■□□□□ 0.18
CPSF7-205ENST00000439958 ARHGEF26Q96DR7 871 aa16.16■□□□□ 0.18
CPSF7-205ENST00000439958 PLXNA1Q9UIW2 1896 aa16.16■□□□□ 0.18
CPSF7-205ENST00000439958 LACTBL1A8MY62 500 aa16.16■□□□□ 0.18
CPSF7-205ENST00000439958 KIAA0391O15091 583 aaKnown RBP16.16■□□□□ 0.18
CPSF7-205ENST00000439958 CTIFO43310 598 aaKnown RBP16.16■□□□□ 0.18
CPSF7-205ENST00000439958 TADA3O75528 432 aa16.16■□□□□ 0.18
CPSF7-205ENST00000439958 PRKAR2AP13861 404 aaKnown RBP16.16■□□□□ 0.18
CPSF7-205ENST00000439958 RFX1P22670 979 aa16.16■□□□□ 0.18
CPSF7-205ENST00000439958 GTF2F1P35269 517 aaKnown RBP eCLIP16.16■□□□□ 0.185e-10■■■■■ 57.2
CPSF7-205ENST00000439958 GJC1P36383 396 aa16.16■□□□□ 0.18
CPSF7-205ENST00000439958 NAA35Q5VZE5 725 aa16.16■□□□□ 0.18
CPSF7-205ENST00000439958 JADE1Q6IE81 842 aa16.16■□□□□ 0.18
CPSF7-205ENST00000439958 EFCAB13Q8IY85 973 aa16.16■□□□□ 0.18
CPSF7-205ENST00000439958 SLC35G2Q8TBE7 412 aa16.16■□□□□ 0.18
CPSF7-205ENST00000439958 KIF12Q96FN5 646 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms