RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 ANKMY2Q8IV38 441 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 ZDHHC14Q8IZN3 488 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 ATP11CQ8NB49 1132 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 MAIP1Q8WWC4 291 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 DDX27Q96GQ7 796 aaKnown RBP12.43□□□□□ -0.42
SMPD4-209ENST00000439886 ANAPC7Q9UJX3 599 aa12.43□□□□□ -0.42
SMPD4-209ENST00000439886 PKD1L3Q7Z443 1732 aa12.42□□□□□ -0.42
SMPD4-209ENST00000439886 A0A0A6YYK5 440 aaPredicted RBP12.42□□□□□ -0.42
SMPD4-209ENST00000439886 CDH16O75309 829 aa12.42□□□□□ -0.42
SMPD4-209ENST00000439886 ESRRAP11474 423 aaPredicted RBP12.42□□□□□ -0.42
SMPD4-209ENST00000439886 HSPA6P17066 643 aa12.42□□□□□ -0.42
SMPD4-209ENST00000439886 DEUP1Q05D60 604 aa12.42□□□□□ -0.42
SMPD4-209ENST00000439886 THOC5Q13769 683 aaKnown RBP12.42□□□□□ -0.42
SMPD4-209ENST00000439886 GALNTL6Q49A17 601 aa12.42□□□□□ -0.42
SMPD4-209ENST00000439886 IZUMO3Q5VZ72 239 aa12.42□□□□□ -0.42
SMPD4-209ENST00000439886 ARHGAP27Q6ZUM4 889 aa12.42□□□□□ -0.42
SMPD4-209ENST00000439886 NLRP9Q7RTR0 991 aa12.42□□□□□ -0.42
SMPD4-209ENST00000439886 FBXO41Q8TF61 875 aa12.42□□□□□ -0.42
SMPD4-209ENST00000439886 DTNBP1Q96EV8 351 aa12.42□□□□□ -0.42
SMPD4-209ENST00000439886 SNF8Q96H20 258 aa12.42□□□□□ -0.42
SMPD4-209ENST00000439886 A6NHS1 94 aa12.42□□□□□ -0.42
SMPD4-209ENST00000439886 SUPT3HO75486 399 aa12.42□□□□□ -0.42
SMPD4-209ENST00000439886 MAPK4P31152 587 aa12.42□□□□□ -0.42
SMPD4-209ENST00000439886 VHLP40337 213 aa12.42□□□□□ -0.42
SMPD4-209ENST00000439886 CLCN2P51788 898 aa12.42□□□□□ -0.42
SMPD4-209ENST00000439886 FOXD4Q12950 439 aaPredicted RBP12.42□□□□□ -0.42
SMPD4-209ENST00000439886 DSTYKQ6XUX3 929 aa12.42□□□□□ -0.42
SMPD4-209ENST00000439886 KIFAP3Q92845 792 aa12.42□□□□□ -0.42
SMPD4-209ENST00000439886 TEKT1Q969V4 418 aa12.42□□□□□ -0.42
SMPD4-209ENST00000439886 TXLNGYQ9BZA5 131 aa12.42□□□□□ -0.42
SMPD4-209ENST00000439886 UTP6Q9NYH9 597 aaKnown RBP12.42□□□□□ -0.42
SMPD4-209ENST00000439886 NINJ2Q9NZG7 142 aa12.42□□□□□ -0.42
SMPD4-209ENST00000439886 ZNF148Q9UQR1 794 aa12.42□□□□□ -0.42
SMPD4-209ENST00000439886 C2orf71A6NGG8 1288 aa12.41□□□□□ -0.42
SMPD4-209ENST00000439886 PDXKO00764 312 aa12.41□□□□□ -0.42
SMPD4-209ENST00000439886 GJB6O95452 261 aa12.41□□□□□ -0.42
SMPD4-209ENST00000439886 SGPL1O95470 568 aa12.41□□□□□ -0.42
SMPD4-209ENST00000439886 NTSR2O95665 410 aa12.41□□□□□ -0.42
SMPD4-209ENST00000439886 CETPP11597 493 aa12.41□□□□□ -0.42
SMPD4-209ENST00000439886 RBBP8NLQ8NC74 664 aaPredicted RBP12.41□□□□□ -0.42
SMPD4-209ENST00000439886 RBM15Q96T37 977 aaKnown RBP eCLIP12.41□□□□□ -0.422e-7■■■■□ 19.9
SMPD4-209ENST00000439886 BRD8Q9H0E9 1235 aa12.41□□□□□ -0.42
SMPD4-209ENST00000439886 SIX2Q9NPC8 291 aa12.41□□□□□ -0.42
SMPD4-209ENST00000439886 APEX2Q9UBZ4 518 aa12.41□□□□□ -0.42
SMPD4-209ENST00000439886 EMSYQ7Z589 1322 aa12.41□□□□□ -0.42
SMPD4-209ENST00000439886 HNRNPCP07910 306 aaKnown RBP eCLIP12.41□□□□□ -0.42
SMPD4-209ENST00000439886 ALADP13716 330 aa12.41□□□□□ -0.42
SMPD4-209ENST00000439886 ALOX15P16050 662 aaPredicted RBP12.41□□□□□ -0.42
SMPD4-209ENST00000439886 DYNC1I2Q13409 638 aaKnown RBP12.41□□□□□ -0.42
SMPD4-209ENST00000439886 PKN2Q16513 984 aaKnown RBP12.41□□□□□ -0.42
SMPD4-209ENST00000439886 SYCP2LQ5T4T6 812 aa12.41□□□□□ -0.42
SMPD4-209ENST00000439886 LVRNQ6Q4G3 990 aa12.41□□□□□ -0.42
SMPD4-209ENST00000439886 SLC25A41Q8N5S1 370 aa12.41□□□□□ -0.42
SMPD4-209ENST00000439886 JDP2Q8WYK2 163 aa12.41□□□□□ -0.42
SMPD4-209ENST00000439886 ABTB1Q969K4 478 aaPredicted RBP12.41□□□□□ -0.42
SMPD4-209ENST00000439886 SLX1AQ9BQ83 275 aa12.41□□□□□ -0.42
SMPD4-209ENST00000439886 DCLRE1BQ9H816 532 aa12.41□□□□□ -0.42
SMPD4-209ENST00000439886 KCNMB3Q9NPA1 279 aa12.41□□□□□ -0.42
SMPD4-209ENST00000439886 RABL2AQ9UBK7 228 aaPredicted RBP12.41□□□□□ -0.42
SMPD4-209ENST00000439886 C1orf167Q5SNV9 1468 aa12.41□□□□□ -0.42
SMPD4-209ENST00000439886 PI4K2BG5E9Z4 385 aa12.41□□□□□ -0.42
SMPD4-209ENST00000439886 ATP5HO75947 161 aa12.41□□□□□ -0.42
SMPD4-209ENST00000439886 HAUS5O94927 633 aa12.41□□□□□ -0.42
SMPD4-209ENST00000439886 AKR1B1P15121 316 aa12.41□□□□□ -0.42
SMPD4-209ENST00000439886 NPEPPSP55786 919 aa12.41□□□□□ -0.42
SMPD4-209ENST00000439886 GSTO1P78417 241 aa12.41□□□□□ -0.42
SMPD4-209ENST00000439886 PPATQ06203 517 aa12.41□□□□□ -0.42
SMPD4-209ENST00000439886 MAML1Q92585 1016 aa12.41□□□□□ -0.42
SMPD4-209ENST00000439886 MKNK1Q9BUB5 465 aa12.41□□□□□ -0.42
SMPD4-209ENST00000439886 ANO3Q9BYT9 981 aa12.41□□□□□ -0.42
SMPD4-209ENST00000439886 ARMCX1Q9P291 453 aa12.41□□□□□ -0.42
SMPD4-209ENST00000439886 HEY2Q9UBP5 337 aa12.41□□□□□ -0.42
SMPD4-209ENST00000439886 CASZ1Q86V15 1759 aa12.4□□□□□ -0.42
SMPD4-209ENST00000439886 ARHGAP42A6NI28 874 aa12.4□□□□□ -0.42
SMPD4-209ENST00000439886 TISP43B9A030 160 aa12.4□□□□□ -0.42
SMPD4-209ENST00000439886 RPA3P35244 121 aaPredicted RBP12.4□□□□□ -0.42
SMPD4-209ENST00000439886 WDR4P57081 412 aaKnown RBP12.4□□□□□ -0.42
SMPD4-209ENST00000439886 NKX1-1Q15270 411 aaPredicted RBP12.4□□□□□ -0.42
SMPD4-209ENST00000439886 CGB2Q6NT52 195 aa12.4□□□□□ -0.42
SMPD4-209ENST00000439886 FBXO33Q7Z6M2 555 aa12.4□□□□□ -0.42
SMPD4-209ENST00000439886 TMCO5AQ8N6Q1 288 aa12.4□□□□□ -0.42
SMPD4-209ENST00000439886 SEC14L1Q92503 715 aa12.4□□□□□ -0.42
SMPD4-209ENST00000439886 ART4Q93070 314 aa12.4□□□□□ -0.42
SMPD4-209ENST00000439886 TTC17Q96AE7 1141 aa12.4□□□□□ -0.42
SMPD4-209ENST00000439886 JMJD4Q9H9V9 463 aa12.4□□□□□ -0.42
SMPD4-209ENST00000439886 DUOX1Q9NRD9 1551 aa12.4□□□□□ -0.42
SMPD4-209ENST00000439886 COL1A1P02452 1464 aaPredicted RBP12.4□□□□□ -0.42
SMPD4-209ENST00000439886 PNMA6FA0A0J9YX94 578 aa12.4□□□□□ -0.42
SMPD4-209ENST00000439886 KITP10721 976 aa12.4□□□□□ -0.42
SMPD4-209ENST00000439886 CTNNA2P26232 953 aa12.4□□□□□ -0.42
SMPD4-209ENST00000439886 NOP14P78316 857 aaKnown RBP12.4□□□□□ -0.42
SMPD4-209ENST00000439886 MKRN3Q13064 507 aaKnown RBP12.4□□□□□ -0.42
SMPD4-209ENST00000439886 FAM182AQ5T1J6 154 aa12.4□□□□□ -0.42
SMPD4-209ENST00000439886 C6orf163Q5TEZ5 329 aa12.4□□□□□ -0.42
SMPD4-209ENST00000439886 LLGL2Q6P1M3 1020 aa12.4□□□□□ -0.42
SMPD4-209ENST00000439886 NEDD1Q8NHV4 660 aa12.4□□□□□ -0.42
SMPD4-209ENST00000439886 CYP2W1Q8TAV3 490 aa12.4□□□□□ -0.42
SMPD4-209ENST00000439886 GRAMD1AQ96CP6 724 aa12.4□□□□□ -0.42
SMPD4-209ENST00000439886 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.39□□□□□ -0.43
SMPD4-209ENST00000439886 CHRNB2P17787 502 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms