RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 ZNF507Q8TCN5 953 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 PIGOQ8TEQ8 1089 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 HDAC11Q96DB2 347 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 FAM167AQ96KS9 214 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 NUDCD1Q96RS6 583 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 PACSIN1Q9BY11 444 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 NOD2Q9HC29 1040 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 ZNF304Q9HCX3 659 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 CYP26B1Q9NR63 512 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 PCDHGC5Q9Y5F6 944 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 NWD1Q149M9 1564 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 ABCB11O95342 1321 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 RASA4BC9J798 803 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 RASA4O43374 803 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 FTLP02792 175 aaPredicted RBP6.73□□□□□ -1.33
BDNF-211ENST00000439476 FESP07332 822 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 TGFB3P10600 412 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 SOX5P35711 763 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 MLH1P40692 756 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 STAT3P40763 770 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 GCLCP48506 637 aaPredicted RBP6.73□□□□□ -1.33
BDNF-211ENST00000439476 TAP1Q03518 808 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 DDR1Q08345 913 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 MYBPC3Q14896 1274 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 TBC1D9BQ66K14 1250 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 SAMD14Q8IZD0 417 aaPredicted RBP6.73□□□□□ -1.33
BDNF-211ENST00000439476 TAB3Q8N5C8 712 aaPredicted RBP6.73□□□□□ -1.33
BDNF-211ENST00000439476 PDZD8Q8NEN9 1154 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 SLC35G2Q8TBE7 412 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 TGS1Q96RS0 853 aaKnown RBP6.73□□□□□ -1.33
BDNF-211ENST00000439476 TIPINQ9BVW5 301 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 INO80BQ9C086 356 aaPredicted RBP6.73□□□□□ -1.33
BDNF-211ENST00000439476 KLC2Q9H0B6 622 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 PI4KBQ9UBF8 816 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 ZBTB5O15062 677 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 PRPSAP2O60256 369 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 FSBPO95073 299 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 PSAPP07602 524 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 CCND2P30279 289 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 HSPA9P38646 679 aaKnown RBP6.73□□□□□ -1.33
BDNF-211ENST00000439476 KCNQ4P56696 695 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 UBXN2AP68543 259 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 LRP8Q14114 963 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 TAF1BQ53T94 588 aaPredicted RBP6.73□□□□□ -1.33
BDNF-211ENST00000439476 BSPRYQ5W0U4 402 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 KRT80Q6KB66 452 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 ZNF746Q6NUN9 644 aaPredicted RBP6.73□□□□□ -1.33
BDNF-211ENST00000439476 RNF207Q6ZRF8 634 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 METTL23Q86XA0 190 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 SYT2Q8N9I0 419 aaPredicted RBP6.73□□□□□ -1.33
BDNF-211ENST00000439476 PYROXD1Q8WU10 500 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 OLFM3Q96PB7 478 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 RPS6KC1Q96S38 1066 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 ERP44Q9BS26 406 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 DDX20Q9UHI6 824 aaKnown RBP6.73□□□□□ -1.33
BDNF-211ENST00000439476 NAGPAQ9UK23 515 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 DBR1Q9UK59 544 aaKnown RBP6.73□□□□□ -1.33
BDNF-211ENST00000439476 TRIM33Q9UPN9 1127 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 USP15Q9Y4E8 981 aaPredicted RBP6.73□□□□□ -1.33
BDNF-211ENST00000439476 ANGPTL3Q9Y5C1 460 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 WDR91A4D1P6 747 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 AP3B1O00203 1094 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 PDXKO00764 312 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 PAMP19021 973 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 TAC1P20366 129 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 TBXAS1P24557 533 aaPredicted RBP6.73□□□□□ -1.33
BDNF-211ENST00000439476 GRB10Q13322 594 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 ARL13BQ3SXY8 428 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 TBC1D10BQ4KMP7 808 aaPredicted RBP6.73□□□□□ -1.33
BDNF-211ENST00000439476 MEI1Q5TIA1 1274 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 ALKBH2Q6NS38 261 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 TMEM35BQ8NCS4 154 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 CATSPER1Q8NEC5 780 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 SCG3Q8WXD2 468 aaKnown RBP6.73□□□□□ -1.33
BDNF-211ENST00000439476 DKK3Q9UBP4 350 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 CROTQ9UKG9 612 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 ARL2BPQ9Y2Y0 163 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 MEGF6O75095 1541 aa6.73□□□□□ -1.33
BDNF-211ENST00000439476 USP17L10C9JJH3 530 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 SPAG7O75391 227 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 PDHA1P08559 390 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 PHEXP78562 749 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 IFRD2Q12894 506 aaPredicted RBP6.72□□□□□ -1.33
BDNF-211ENST00000439476 ART3Q13508 389 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 SLC29A2Q14542 456 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 EDRF1Q3B7T1 1238 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 SYDE2Q5VT97 1194 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 EPM2AIP1Q7L775 607 aaPredicted RBP6.72□□□□□ -1.33
BDNF-211ENST00000439476 KRT27Q7Z3Y8 459 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 ADGRA1Q86SQ6 560 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 JAMLQ86YT9 394 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 APLFQ8IW19 511 aaPredicted RBP6.72□□□□□ -1.33
BDNF-211ENST00000439476 DAGLBQ8NCG7 672 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 TPCN2Q8NHX9 752 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 LRRC37BQ96QE4 947 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 WNT8AQ9H1J5 351 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 SUCLA2Q9P2R7 463 aaPredicted RBP6.72□□□□□ -1.33
BDNF-211ENST00000439476 MON2Q7Z3U7 1717 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 ARHGAP10A1A4S6 786 aa6.72□□□□□ -1.33
BDNF-211ENST00000439476 SPECC1L-ADORA2AF8WAN1 911 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms