RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 AVPR1BP47901 424 aa4.16□□□□□ -1.74
HMGB1P18-201ENST00000438801 MEF2AQ02078 507 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P18-201ENST00000438801 DDB1Q16531 1140 aa4.16□□□□□ -1.74
HMGB1P18-201ENST00000438801 NBPF8Q3BBV2 869 aa4.16□□□□□ -1.74
HMGB1P18-201ENST00000438801 STRIP1Q5VSL9 837 aa4.16□□□□□ -1.74
HMGB1P18-201ENST00000438801 BROXQ5VW32 411 aa4.16□□□□□ -1.74
HMGB1P18-201ENST00000438801 ANKS6Q68DC2 871 aa4.16□□□□□ -1.74
HMGB1P18-201ENST00000438801 EFCAB12Q6NXP0 572 aa4.16□□□□□ -1.74
HMGB1P18-201ENST00000438801 BTNL9Q6UXG8 535 aa4.16□□□□□ -1.74
HMGB1P18-201ENST00000438801 ABHD15Q6UXT9 468 aa4.16□□□□□ -1.74
HMGB1P18-201ENST00000438801 CMTR2Q8IYT2 770 aaKnown RBP4.16□□□□□ -1.74
HMGB1P18-201ENST00000438801 CPEB3Q8NE35 698 aaKnown RBP4.16□□□□□ -1.74
HMGB1P18-201ENST00000438801 SNX33Q8WV41 574 aa4.16□□□□□ -1.74
HMGB1P18-201ENST00000438801 UBXN4Q92575 508 aa4.16□□□□□ -1.74
HMGB1P18-201ENST00000438801 DRC1Q96MC2 740 aa4.16□□□□□ -1.74
HMGB1P18-201ENST00000438801 PRDM12Q9H4Q4 367 aa4.16□□□□□ -1.74
HMGB1P18-201ENST00000438801 EMC7Q9NPA0 242 aa4.16□□□□□ -1.74
HMGB1P18-201ENST00000438801 SYBUQ9NX95 663 aa4.16□□□□□ -1.74
HMGB1P18-201ENST00000438801 POGKQ9P215 609 aa4.16□□□□□ -1.74
HMGB1P18-201ENST00000438801 DKK2Q9UBU2 259 aa4.16□□□□□ -1.74
HMGB1P18-201ENST00000438801 FGD5Q6ZNL6 1462 aa4.16□□□□□ -1.74
HMGB1P18-201ENST00000438801 NEO1Q92859 1461 aa4.16□□□□□ -1.74
HMGB1P18-201ENST00000438801 RGPD1P0DJD0 1748 aa4.15□□□□□ -1.74
HMGB1P18-201ENST00000438801 ATRNO75882 1429 aa4.15□□□□□ -1.74
HMGB1P18-201ENST00000438801 UACAQ9BZF9 1416 aa4.15□□□□□ -1.74
HMGB1P18-201ENST00000438801 B5MCH6 92 aa4.15□□□□□ -1.75
HMGB1P18-201ENST00000438801 ZNF185O15231 689 aa4.15□□□□□ -1.75
HMGB1P18-201ENST00000438801 TMEM127O75204 238 aa4.15□□□□□ -1.75
HMGB1P18-201ENST00000438801 SPATA31D3P0C874 917 aa4.15□□□□□ -1.75
HMGB1P18-201ENST00000438801 RBP3P10745 1247 aa4.15□□□□□ -1.75
HMGB1P18-201ENST00000438801 MGAT1P26572 445 aa4.15□□□□□ -1.75
HMGB1P18-201ENST00000438801 MRPS21P82921 87 aaKnown RBP4.15□□□□□ -1.75
HMGB1P18-201ENST00000438801 GUCY1B3Q02153 619 aa4.15□□□□□ -1.75
HMGB1P18-201ENST00000438801 BMT2Q1RMZ1 405 aa4.15□□□□□ -1.75
HMGB1P18-201ENST00000438801 PDCD4Q53EL6 469 aaKnown RBP4.15□□□□□ -1.75
HMGB1P18-201ENST00000438801 SPATA31D4Q6ZUB0 917 aa4.15□□□□□ -1.75
HMGB1P18-201ENST00000438801 ADGRG3Q86Y34 549 aa4.15□□□□□ -1.75
HMGB1P18-201ENST00000438801 RNF169Q8NCN4 708 aa4.15□□□□□ -1.75
HMGB1P18-201ENST00000438801 MDM1Q8TC05 714 aa4.15□□□□□ -1.75
HMGB1P18-201ENST00000438801 NTN5Q8WTR8 489 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P18-201ENST00000438801 TFAP2CQ92754 450 aa4.15□□□□□ -1.75
HMGB1P18-201ENST00000438801 BBC3Q96PG8 261 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P18-201ENST00000438801 GPRC5DQ9NZD1 345 aa4.15□□□□□ -1.75
HMGB1P18-201ENST00000438801 NOC2LQ9Y3T9 749 aaKnown RBP4.15□□□□□ -1.75
HMGB1P18-201ENST00000438801 CDY2AQ9Y6F7 541 aa4.15□□□□□ -1.75
HMGB1P18-201ENST00000438801 DENND4BO75064 1496 aaPredicted RBP4.15□□□□□ -1.75
HMGB1P18-201ENST00000438801 MAST4O15021 2626 aa4.14□□□□□ -1.75
HMGB1P18-201ENST00000438801 UNC119BA6NIH7 251 aa4.14□□□□□ -1.75
HMGB1P18-201ENST00000438801 GASTP01350 101 aa4.14□□□□□ -1.75
HMGB1P18-201ENST00000438801 LPLP06858 475 aa4.14□□□□□ -1.75
HMGB1P18-201ENST00000438801 CTSSP25774 331 aa4.14□□□□□ -1.75
HMGB1P18-201ENST00000438801 DDX6P26196 483 aaKnown RBP eCLIP4.14□□□□□ -1.75
HMGB1P18-201ENST00000438801 CLK3P49761 638 aaKnown RBP4.14□□□□□ -1.75
HMGB1P18-201ENST00000438801 LGALS4P56470 323 aa4.14□□□□□ -1.75
HMGB1P18-201ENST00000438801 DALRD3Q5D0E6 543 aaKnown RBP4.14□□□□□ -1.75
HMGB1P18-201ENST00000438801 PITRM1Q5JRX3 1037 aa4.14□□□□□ -1.75
HMGB1P18-201ENST00000438801 PDZD4Q76G19 769 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P18-201ENST00000438801 RASSF3Q86WH2 238 aa4.14□□□□□ -1.75
HMGB1P18-201ENST00000438801 LINC00476Q8WZB0 136 aa4.14□□□□□ -1.75
HMGB1P18-201ENST00000438801 SLC5A5Q92911 643 aa4.14□□□□□ -1.75
HMGB1P18-201ENST00000438801 CAVIN3Q969G5 261 aa4.14□□□□□ -1.75
HMGB1P18-201ENST00000438801 COQ10AQ96MF6 247 aa4.14□□□□□ -1.75
HMGB1P18-201ENST00000438801 FEZ1Q99689 392 aa4.14□□□□□ -1.75
HMGB1P18-201ENST00000438801 KCTD10Q9H3F6 313 aa4.14□□□□□ -1.75
HMGB1P18-201ENST00000438801 PLAAQ9Y263 795 aa4.14□□□□□ -1.75
HMGB1P18-201ENST00000438801 EPN1Q9Y6I3 576 aaPredicted RBP4.14□□□□□ -1.75
HMGB1P18-201ENST00000438801 ABCA5Q8WWZ7 1642 aa4.13□□□□□ -1.75
HMGB1P18-201ENST00000438801 UNC80Q8N2C7 3258 aa4.13□□□□□ -1.75
HMGB1P18-201ENST00000438801 NPHP4O75161 1426 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P18-201ENST00000438801 C9orf84Q5VXU9 1444 aa4.13□□□□□ -1.75
HMGB1P18-201ENST00000438801 IQGAP1P46940 1657 aa4.13□□□□□ -1.75
HMGB1P18-201ENST00000438801 ANKRD11Q6UB99 2663 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P18-201ENST00000438801 KMT2BQ9UMN6 2715 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P18-201ENST00000438801 ZMYM4Q5VZL5 1548 aa4.13□□□□□ -1.75
HMGB1P18-201ENST00000438801 KDM5DQ9BY66 1539 aa4.13□□□□□ -1.75
HMGB1P18-201ENST00000438801 PIPSLA2A3N6 862 aa4.13□□□□□ -1.75
HMGB1P18-201ENST00000438801 MASP2O00187 686 aa4.13□□□□□ -1.75
HMGB1P18-201ENST00000438801 CDC45O75419 566 aa4.13□□□□□ -1.75
HMGB1P18-201ENST00000438801 HLA-DOAP06340 250 aa4.13□□□□□ -1.75
HMGB1P18-201ENST00000438801 HKR1P10072 659 aa4.13□□□□□ -1.75
HMGB1P18-201ENST00000438801 TYRP1P17643 537 aa4.13□□□□□ -1.75
HMGB1P18-201ENST00000438801 CANXP27824 592 aaKnown RBP4.13□□□□□ -1.75
HMGB1P18-201ENST00000438801 CRHR1P34998 444 aa4.13□□□□□ -1.75
HMGB1P18-201ENST00000438801 IL12RB1P42701 662 aa4.13□□□□□ -1.75
HMGB1P18-201ENST00000438801 SEC24CP53992 1094 aa4.13□□□□□ -1.75
HMGB1P18-201ENST00000438801 TP53BP2Q13625 1128 aa4.13□□□□□ -1.75
HMGB1P18-201ENST00000438801 CT83Q5H943 113 aa4.13□□□□□ -1.75
HMGB1P18-201ENST00000438801 FAM102AQ5T9C2 384 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P18-201ENST00000438801 METRNLQ641Q3 311 aa4.13□□□□□ -1.75
HMGB1P18-201ENST00000438801 SYCE2Q6PIF2 218 aa4.13□□□□□ -1.75
HMGB1P18-201ENST00000438801 ZFP28Q8NHY6 868 aa4.13□□□□□ -1.75
HMGB1P18-201ENST00000438801 ZNF480Q8WV37 535 aa4.13□□□□□ -1.75
HMGB1P18-201ENST00000438801 MFSD3Q96ES6 412 aa4.13□□□□□ -1.75
HMGB1P18-201ENST00000438801 CEP95Q96GE4 821 aa4.13□□□□□ -1.75
HMGB1P18-201ENST00000438801 PAWRQ96IZ0 340 aaKnown RBP4.13□□□□□ -1.75
HMGB1P18-201ENST00000438801 ADAM2Q99965 735 aa4.13□□□□□ -1.75
HMGB1P18-201ENST00000438801 MAP3K2Q9Y2U5 619 aa4.13□□□□□ -1.75
HMGB1P18-201ENST00000438801 USP15Q9Y4E8 981 aaPredicted RBP4.13□□□□□ -1.75
HMGB1P18-201ENST00000438801 FHAD1B1AJZ9 1412 aa4.12□□□□□ -1.75
HMGB1P18-201ENST00000438801 MARCH11A6NNE9 402 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms