RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 B3GAT3O94766 335 aa19.96■□□□□ 0.79
GTF3A-204ENST00000438571 OR1D2P34982 312 aa19.96■□□□□ 0.79
GTF3A-204ENST00000438571 EFNA5P52803 228 aa19.96■□□□□ 0.79
GTF3A-204ENST00000438571 LIN9Q5TKA1 542 aa19.96■□□□□ 0.79
GTF3A-204ENST00000438571 PARM1Q6UWI2 310 aa19.96■□□□□ 0.79
GTF3A-204ENST00000438571 DTWD2Q8NBA8 298 aa19.96■□□□□ 0.79
GTF3A-204ENST00000438571 ITFG1Q8TB96 612 aa19.96■□□□□ 0.79
GTF3A-204ENST00000438571 ZMAT2Q96NC0 199 aaKnown RBP19.96■□□□□ 0.79
GTF3A-204ENST00000438571 ACO2Q99798 780 aaKnown RBP19.96■□□□□ 0.79
GTF3A-204ENST00000438571 TARS2Q9BW92 718 aaKnown RBP19.96■□□□□ 0.79
GTF3A-204ENST00000438571 TBC1D17Q9HA65 648 aa19.96■□□□□ 0.79
GTF3A-204ENST00000438571 MTRRQ9UBK8 725 aa19.96■□□□□ 0.79
GTF3A-204ENST00000438571 POLIQ9UNA4 740 aa19.96■□□□□ 0.79
GTF3A-204ENST00000438571 TNFSF13BQ9Y275 285 aa19.96■□□□□ 0.79
GTF3A-204ENST00000438571 CDY1Q9Y6F8 540 aa19.96■□□□□ 0.79
GTF3A-204ENST00000438571 TCHHQ07283 1943 aa19.96■□□□□ 0.79
GTF3A-204ENST00000438571 SMIM28A0A1B0GU29 152 aa19.95■□□□□ 0.78
GTF3A-204ENST00000438571 K7ERI5 159 aa19.95■□□□□ 0.78
GTF3A-204ENST00000438571 GRM5P41594 1212 aa19.95■□□□□ 0.78
GTF3A-204ENST00000438571 ELAVL2Q12926 359 aaKnown RBP19.95■□□□□ 0.78
GTF3A-204ENST00000438571 ANGPT1Q15389 498 aa19.95■□□□□ 0.78
GTF3A-204ENST00000438571 UPP1Q16831 310 aa19.95■□□□□ 0.78
GTF3A-204ENST00000438571 ZNF568Q3ZCX4 644 aa19.95■□□□□ 0.78
GTF3A-204ENST00000438571 RTP3Q9BQQ7 232 aa19.95■□□□□ 0.78
GTF3A-204ENST00000438571 PTPRHQ9HD43 1115 aa19.95■□□□□ 0.78
GTF3A-204ENST00000438571 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.95■□□□□ 0.78
GTF3A-204ENST00000438571 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.95■□□□□ 0.78
GTF3A-204ENST00000438571 ARHGAP28Q9P2N2 729 aa19.95■□□□□ 0.78
GTF3A-204ENST00000438571 SFI1A8K8P3 1242 aa19.94■□□□□ 0.78
GTF3A-204ENST00000438571 STK25O00506 426 aa19.94■□□□□ 0.78
GTF3A-204ENST00000438571 EIF5BO60841 1220 aaKnown RBP19.94■□□□□ 0.78
GTF3A-204ENST00000438571 HARSP12081 509 aaKnown RBP19.94■□□□□ 0.78
GTF3A-204ENST00000438571 RAB33AQ14088 237 aa19.94■□□□□ 0.78
GTF3A-204ENST00000438571 PDIA5Q14554 519 aa19.94■□□□□ 0.78
GTF3A-204ENST00000438571 AXDND1Q5T1B0 1012 aaPredicted RBP19.94■□□□□ 0.78
GTF3A-204ENST00000438571 RINT1Q6NUQ1 792 aa19.94■□□□□ 0.78
GTF3A-204ENST00000438571 POTEHQ6S545 545 aa19.94■□□□□ 0.78
GTF3A-204ENST00000438571 C1orf186Q6ZWK4 172 aa19.94■□□□□ 0.78
GTF3A-204ENST00000438571 FGF13Q92913 245 aa19.94■□□□□ 0.78
GTF3A-204ENST00000438571 ZBTB45Q96K62 511 aaPredicted RBP19.94■□□□□ 0.78
GTF3A-204ENST00000438571 ARHGEF3Q9NR81 526 aa19.94■□□□□ 0.78
GTF3A-204ENST00000438571 SLC16A4O15374 487 aa19.93■□□□□ 0.78
GTF3A-204ENST00000438571 LRRN2O75325 713 aa19.93■□□□□ 0.78
GTF3A-204ENST00000438571 DCNP07585 359 aaKnown RBP19.93■□□□□ 0.78
GTF3A-204ENST00000438571 HNRNPA1P09651 372 aaKnown RBP eCLIP19.93■□□□□ 0.78
GTF3A-204ENST00000438571 HOXA9P31269 272 aa19.93■□□□□ 0.78
GTF3A-204ENST00000438571 RAD51AP2Q09MP3 1159 aa19.93■□□□□ 0.78
GTF3A-204ENST00000438571 SEZ6Q53EL9 994 aa19.93■□□□□ 0.78
GTF3A-204ENST00000438571 XKR4Q5GH76 650 aa19.93■□□□□ 0.78
GTF3A-204ENST00000438571 SPECC1Q5M775 1068 aa19.93■□□□□ 0.78
GTF3A-204ENST00000438571 DCLRE1AQ6PJP8 1040 aa19.93■□□□□ 0.78
GTF3A-204ENST00000438571 ALKAL1Q6UXT8 129 aa19.93■□□□□ 0.78
GTF3A-204ENST00000438571 ING5Q8WYH8 240 aa19.93■□□□□ 0.78
GTF3A-204ENST00000438571 NXPE3Q969Y0 559 aa19.93■□□□□ 0.78
GTF3A-204ENST00000438571 SNX27Q96L92 541 aa19.93■□□□□ 0.78
GTF3A-204ENST00000438571 PNMA5Q96PV4 448 aa19.93■□□□□ 0.78
GTF3A-204ENST00000438571 FOXQ1Q9C009 403 aa19.93■□□□□ 0.78
GTF3A-204ENST00000438571 KMT5AQ9NQR1 393 aa19.93■□□□□ 0.78
GTF3A-204ENST00000438571 DNMT3BQ9UBC3 853 aaKnown RBP19.93■□□□□ 0.78
GTF3A-204ENST00000438571 CDH7Q9ULB5 785 aa19.93■□□□□ 0.78
GTF3A-204ENST00000438571 SPTBN4Q9H254 2564 aa19.92■□□□□ 0.78
GTF3A-204ENST00000438571 PODXLO00592 558 aa19.92■□□□□ 0.78
GTF3A-204ENST00000438571 CD2BP2O95400 341 aaKnown RBP19.92■□□□□ 0.78
GTF3A-204ENST00000438571 PROZP22891 400 aa19.92■□□□□ 0.78
GTF3A-204ENST00000438571 GPC5P78333 572 aa19.92■□□□□ 0.78
GTF3A-204ENST00000438571 DMP1Q13316 513 aaPredicted RBP19.92■□□□□ 0.78
GTF3A-204ENST00000438571 ZRSR1Q15695 479 aaKnown RBP19.92■□□□□ 0.78
GTF3A-204ENST00000438571 KRT79Q5XKE5 535 aa19.92■□□□□ 0.78
GTF3A-204ENST00000438571 C18orf25Q96B23 403 aaPredicted RBP19.92■□□□□ 0.78
GTF3A-204ENST00000438571 PLIN2Q99541 437 aa19.92■□□□□ 0.78
GTF3A-204ENST00000438571 CCDC94Q9BW85 323 aaPredicted RBP19.92■□□□□ 0.78
GTF3A-204ENST00000438571 MRPL4Q9BYD3 311 aaKnown RBP19.92■□□□□ 0.78
GTF3A-204ENST00000438571 TMEM134Q9H6X4 195 aa19.92■□□□□ 0.78
GTF3A-204ENST00000438571 SLC2A4RGQ9NR83 387 aa19.92■□□□□ 0.78
GTF3A-204ENST00000438571 DNM3Q9UQ16 869 aa19.92■□□□□ 0.78
GTF3A-204ENST00000438571 SCN1AP35498 2009 aa19.92■□□□□ 0.78
GTF3A-204ENST00000438571 KIF26AQ9ULI4 1882 aaPredicted RBP19.91■□□□□ 0.78
GTF3A-204ENST00000438571 GLULP15104 373 aa19.91■□□□□ 0.78
GTF3A-204ENST00000438571 RFX1P22670 979 aa19.91■□□□□ 0.78
GTF3A-204ENST00000438571 ROR1Q01973 937 aa19.91■□□□□ 0.78
GTF3A-204ENST00000438571 CACNB1Q02641 598 aaPredicted RBP19.91■□□□□ 0.78
GTF3A-204ENST00000438571 SLC5A9Q2M3M2 681 aa19.91■□□□□ 0.78
GTF3A-204ENST00000438571 PDXDC1Q6P996 788 aa19.91■□□□□ 0.78
GTF3A-204ENST00000438571 NPAS3Q8IXF0 933 aa19.91■□□□□ 0.78
GTF3A-204ENST00000438571 UROC1Q96N76 676 aa19.91■□□□□ 0.78
GTF3A-204ENST00000438571 KXD1Q9BQD3 176 aa19.91■□□□□ 0.78
GTF3A-204ENST00000438571 RAB34Q9BZG1 259 aa19.91■□□□□ 0.78
GTF3A-204ENST00000438571 DLGAP2Q9P1A6 1054 aa19.91■□□□□ 0.78
GTF3A-204ENST00000438571 DCHS1Q96JQ0 3298 aa19.91■□□□□ 0.78
GTF3A-204ENST00000438571 WDR27A2RRH5 827 aa19.9■□□□□ 0.78
GTF3A-204ENST00000438571 NRG2O14511 850 aaPredicted RBP19.9■□□□□ 0.78
GTF3A-204ENST00000438571 PRPHP41219 470 aa19.9■□□□□ 0.78
GTF3A-204ENST00000438571 YARSP54577 528 aaKnown RBP19.9■□□□□ 0.78
GTF3A-204ENST00000438571 VARS2Q5ST30 1063 aaKnown RBP19.9■□□□□ 0.78
GTF3A-204ENST00000438571 MCTP1Q6DN14 999 aa19.9■□□□□ 0.78
GTF3A-204ENST00000438571 MPZL3Q6UWV2 235 aa19.9■□□□□ 0.78
GTF3A-204ENST00000438571 DTHD1Q6ZMT9 781 aa19.9■□□□□ 0.78
GTF3A-204ENST00000438571 NKD2Q969F2 451 aaPredicted RBP19.9■□□□□ 0.78
GTF3A-204ENST00000438571 DRC1Q96MC2 740 aa19.9■□□□□ 0.78
GTF3A-204ENST00000438571 ANKFY1Q9P2R3 1169 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms