RNA–Protein interactions for RNA: ENST00000438014.5

R3HDM1-208, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-208ENST00000438014 PARD6AQ9NPB6 346 aa9.37□□□□□ -0.91
R3HDM1-208ENST00000438014 MRPL17Q9NRX2 175 aaKnown RBP9.37□□□□□ -0.91
R3HDM1-208ENST00000438014 ZFP37Q9Y6Q3 630 aaPredicted RBP9.37□□□□□ -0.91
R3HDM1-208ENST00000438014 CACNA1IQ9P0X4 2223 aa9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 FANCMQ8IYD8 2048 aa9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 ERICH2A1L162 156 aa9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 INPPL1O15357 1258 aa9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 MAGEB2O15479 319 aa9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 LRRN2O75325 713 aa9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 VTNP04004 478 aa9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 PROS1P07225 676 aa9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 CNPP09543 421 aaKnown RBP9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 NLRP11P59045 1033 aaKnown RBP9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 SHC2P98077 582 aa9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 PFKPQ01813 784 aa9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 RNASELQ05823 741 aaKnown RBP9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 SPEM2Q0P670 501 aa9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 SNW1Q13573 536 aaKnown RBP9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 HTR4Q13639 388 aa9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 GNL2Q13823 731 aaKnown RBP9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 CCINQ13939 588 aa9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 UBXN2BQ14CS0 331 aa9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 MLF2Q15773 248 aaPredicted RBP9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 SLC44A4Q53GD3 710 aa9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 ZBTB41Q5SVQ8 909 aa9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 MEI1Q5TIA1 1274 aa9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 LAIR1Q6GTX8 287 aa9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 RIPOR1Q6ZS17 1223 aa9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 PHKBQ93100 1093 aa9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 MAP7D2Q96T17 732 aa9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 MXRA8Q9BRK3 442 aa9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 DDX23Q9BUQ8 820 aaKnown RBP9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 SUV39H2Q9H5I1 410 aa9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 NRDE2Q9H7Z3 1164 aa9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 MAN1C1Q9NR34 630 aa9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 CHST12Q9NRB3 414 aa9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 KCNH7Q9NS40 1196 aa9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 SEC63Q9UGP8 760 aaKnown RBP9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 PCDHGC4Q9Y5F7 938 aa9.36□□□□□ -0.91
R3HDM1-208ENST00000438014 FAM208BQ5VWN6 2430 aa9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 IGKV6D-21A0A0A0MT36 114 aa9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 C22orf31O95567 290 aa9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 GLUD1P00367 558 aa9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 C1RP00736 705 aa9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 ALDH2P05091 517 aa9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 SSBP05455 408 aaKnown RBP eCLIP9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 RETP07949 1114 aa9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 SMARCA1P28370 1054 aa9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 PMLP29590 882 aa9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 ST13P50502 369 aaKnown RBP9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 GPC5P78333 572 aa9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 SFSWAPQ12872 951 aaKnown RBP9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 TRDNQ13061 729 aa9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 GRM2Q14416 872 aa9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 PPP2R5DQ14738 602 aa9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 WTAPQ15007 396 aa9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 NOMO2Q5JPE7 1267 aa9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 IL31Q6EBC2 164 aa9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 GLB1LQ6UWU2 654 aa9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 ABHD15Q6UXT9 468 aa9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 KRT25Q7Z3Z0 450 aa9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 CATIPQ7Z7H3 387 aa9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 TMEM173Q86WV6 379 aaPredicted RBP9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 CKAP2LQ8IYA6 745 aa9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 ZNF654Q8IZM8 581 aa9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 GSX2Q9BZM3 304 aa9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 PLEKHA4Q9H4M7 779 aa9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 ZNF302Q9NR11 478 aa9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 PPP4R2Q9NY27 417 aa9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 GGT7Q9UJ14 662 aa9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 PCDHA6Q9UN73 950 aa9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 CEP131Q9UPN4 1083 aa9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 AKT3Q9Y243 479 aa9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 PCDHA8Q9Y5H6 950 aa9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 NUMBLQ9Y6R0 609 aa9.35□□□□□ -0.91
R3HDM1-208ENST00000438014 SALL3Q9BXA9 1300 aa9.34□□□□□ -0.91
R3HDM1-208ENST00000438014 USP24Q9UPU5 2620 aa9.34□□□□□ -0.91
R3HDM1-208ENST00000438014 IFIT3O14879 490 aaKnown RBP9.34□□□□□ -0.91
R3HDM1-208ENST00000438014 KHNYNO15037 678 aaKnown RBP9.34□□□□□ -0.91
R3HDM1-208ENST00000438014 EFSO43281 561 aa9.34□□□□□ -0.91
R3HDM1-208ENST00000438014 URODP06132 367 aa9.34□□□□□ -0.91
R3HDM1-208ENST00000438014 EDN3P14138 238 aa9.34□□□□□ -0.91
R3HDM1-208ENST00000438014 TARSP26639 723 aaKnown RBP9.34□□□□□ -0.91
R3HDM1-208ENST00000438014 KIF5BP33176 963 aa9.34□□□□□ -0.91
R3HDM1-208ENST00000438014 RPS9P46781 194 aaKnown RBP9.34□□□□□ -0.91
R3HDM1-208ENST00000438014 SLC11A1P49279 550 aa9.34□□□□□ -0.91
R3HDM1-208ENST00000438014 PDE1AP54750 535 aa9.34□□□□□ -0.91
R3HDM1-208ENST00000438014 AK2P54819 239 aa9.34□□□□□ -0.91
R3HDM1-208ENST00000438014 CDC42EP1Q00587 391 aa9.34□□□□□ -0.91
R3HDM1-208ENST00000438014 TROAPQ12815 778 aa9.34□□□□□ -0.91
R3HDM1-208ENST00000438014 SART3Q15020 963 aaKnown RBP9.34□□□□□ -0.91
R3HDM1-208ENST00000438014 CSRP2Q16527 193 aa9.34□□□□□ -0.91
R3HDM1-208ENST00000438014 ZNF394Q53GI3 561 aa9.34□□□□□ -0.91
R3HDM1-208ENST00000438014 N4BP2L1Q5TBK1 243 aaPredicted RBP9.34□□□□□ -0.91
R3HDM1-208ENST00000438014 MIS18BP1Q6P0N0 1132 aa9.34□□□□□ -0.91
R3HDM1-208ENST00000438014 RILPL2Q969X0 211 aa9.34□□□□□ -0.91
R3HDM1-208ENST00000438014 CLDN23Q96B33 292 aa9.34□□□□□ -0.91
R3HDM1-208ENST00000438014 LZTS2Q9BRK4 669 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms