RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 TRIM9Q9C026 710 aa16.73■□□□□ 0.27
PTPN13-204ENST00000436978 CSF1RP07333 972 aa16.73■□□□□ 0.27
PTPN13-204ENST00000436978 FMO5P49326 533 aa16.73■□□□□ 0.27
PTPN13-204ENST00000436978 DDX53Q86TM3 631 aaKnown RBP16.73■□□□□ 0.27
PTPN13-204ENST00000436978 ARHGAP18Q8N392 663 aa16.73■□□□□ 0.27
PTPN13-204ENST00000436978 PIP4K2CQ8TBX8 421 aa16.73■□□□□ 0.27
PTPN13-204ENST00000436978 IGDCC4Q8TDY8 1250 aa16.73■□□□□ 0.27
PTPN13-204ENST00000436978 NSMCE4AQ9NXX6 385 aa16.73■□□□□ 0.27
PTPN13-204ENST00000436978 KCNN4O15554 427 aa16.72■□□□□ 0.27
PTPN13-204ENST00000436978 EXTL3O43909 919 aa16.72■□□□□ 0.27
PTPN13-204ENST00000436978 ITGA4P13612 1032 aa16.72■□□□□ 0.27
PTPN13-204ENST00000436978 PPP2R2AP63151 447 aa16.72■□□□□ 0.27
PTPN13-204ENST00000436978 ZNF746Q6NUN9 644 aaPredicted RBP16.72■□□□□ 0.27
PTPN13-204ENST00000436978 ZNF677Q86XU0 584 aa16.72■□□□□ 0.27
PTPN13-204ENST00000436978 CATSPERBQ9H7T0 1116 aa16.72■□□□□ 0.27
PTPN13-204ENST00000436978 GTF2A2P52657 109 aa16.72■□□□□ 0.27
PTPN13-204ENST00000436978 KCNA1Q09470 495 aa16.72■□□□□ 0.27
PTPN13-204ENST00000436978 MFN1Q8IWA4 741 aa16.72■□□□□ 0.27
PTPN13-204ENST00000436978 ST13P4Q8IZP2 240 aaPredicted RBP16.72■□□□□ 0.27
PTPN13-204ENST00000436978 OR6P1Q8NGX9 317 aa16.72■□□□□ 0.27
PTPN13-204ENST00000436978 PRMT7Q9NVM4 692 aaPredicted RBP16.72■□□□□ 0.27
PTPN13-204ENST00000436978 PRR12Q9ULL5 1215 aa16.72■□□□□ 0.27
PTPN13-204ENST00000436978 PRPF4O43172 522 aaKnown RBP eCLIP16.72■□□□□ 0.27
PTPN13-204ENST00000436978 MTHFD1LQ6UB35 978 aa16.72■□□□□ 0.27
PTPN13-204ENST00000436978 PPM1NQ8N819 430 aa16.72■□□□□ 0.27
PTPN13-204ENST00000436978 MRGBPQ9NV56 204 aa16.72■□□□□ 0.27
PTPN13-204ENST00000436978 DEPDC5O75140 1603 aa16.72■□□□□ 0.27
PTPN13-204ENST00000436978 UBA6A0AVT1 1052 aaPredicted RBP16.72■□□□□ 0.27
PTPN13-204ENST00000436978 MOCS2O96007 188 aaPredicted RBP16.72■□□□□ 0.27
PTPN13-204ENST00000436978 WDR72Q3MJ13 1102 aa16.72■□□□□ 0.27
PTPN13-204ENST00000436978 ANKRD40Q6AI12 368 aa16.72■□□□□ 0.27
PTPN13-204ENST00000436978 REEP2Q9BRK0 252 aa16.72■□□□□ 0.27
PTPN13-204ENST00000436978 SPON2Q9BUD6 331 aa16.72■□□□□ 0.27
PTPN13-204ENST00000436978 NEUROG2Q9H2A3 272 aa16.72■□□□□ 0.27
PTPN13-204ENST00000436978 CPS1P31327 1500 aa16.72■□□□□ 0.27
PTPN13-204ENST00000436978 FAM95CA0A1B0GW59 222 aa16.72■□□□□ 0.27
PTPN13-204ENST00000436978 PI4K2BG5E9Z4 385 aa16.72■□□□□ 0.27
PTPN13-204ENST00000436978 TRIM49P0CI25 452 aa16.72■□□□□ 0.27
PTPN13-204ENST00000436978 TRIM49CP0CI26 452 aa16.72■□□□□ 0.27
PTPN13-204ENST00000436978 AARSP49588 968 aaKnown RBP eCLIP16.72■□□□□ 0.27
PTPN13-204ENST00000436978 PP2D1A8MPX8 630 aa16.72■□□□□ 0.27
PTPN13-204ENST00000436978 PNPLA4P41247 253 aa16.72■□□□□ 0.27
PTPN13-204ENST00000436978 TRAPPC11Q7Z392 1133 aa16.72■□□□□ 0.27
PTPN13-204ENST00000436978 TGS1Q96RS0 853 aaKnown RBP16.72■□□□□ 0.27
PTPN13-204ENST00000436978 TRPA1O75762 1119 aa16.72■□□□□ 0.27
PTPN13-204ENST00000436978 C6orf222P0C671 652 aaPredicted RBP16.72■□□□□ 0.27
PTPN13-204ENST00000436978 EEF1DP29692 281 aaKnown RBP16.72■□□□□ 0.27
PTPN13-204ENST00000436978 PRKCEQ02156 737 aa16.72■□□□□ 0.27
PTPN13-204ENST00000436978 BAATQ14032 418 aaPredicted RBP16.72■□□□□ 0.27
PTPN13-204ENST00000436978 LBRQ14739 615 aaKnown RBP16.72■□□□□ 0.27
PTPN13-204ENST00000436978 RNF168Q8IYW5 571 aaPredicted RBP16.72■□□□□ 0.27
PTPN13-204ENST00000436978 GRAMD1AQ96CP6 724 aa16.72■□□□□ 0.27
PTPN13-204ENST00000436978 YY1AP1Q9H869 796 aa16.72■□□□□ 0.27
PTPN13-204ENST00000436978 NPHP3-ACAD11A0A0J9YXS1 232 aa16.71■□□□□ 0.27
PTPN13-204ENST00000436978 HBP1O60381 514 aa16.71■□□□□ 0.27
PTPN13-204ENST00000436978 RPS6KA5O75582 802 aa16.71■□□□□ 0.27
PTPN13-204ENST00000436978 EDRF1Q3B7T1 1238 aa16.71■□□□□ 0.27
PTPN13-204ENST00000436978 SYTL3Q4VX76 610 aa16.71■□□□□ 0.27
PTPN13-204ENST00000436978 ATL2Q8NHH9 583 aa16.71■□□□□ 0.27
PTPN13-204ENST00000436978 KIF2CQ99661 725 aa16.71■□□□□ 0.27
PTPN13-204ENST00000436978 PRRG1O14668 218 aa16.71■□□□□ 0.27
PTPN13-204ENST00000436978 TADA3O75528 432 aa16.71■□□□□ 0.27
PTPN13-204ENST00000436978 KRT17Q04695 432 aa16.71■□□□□ 0.27
PTPN13-204ENST00000436978 ATF7IP2Q5U623 682 aa16.71■□□□□ 0.27
PTPN13-204ENST00000436978 IZUMO3Q5VZ72 239 aa16.71■□□□□ 0.27
PTPN13-204ENST00000436978 NUDCD3Q8IVD9 361 aa16.71■□□□□ 0.27
PTPN13-204ENST00000436978 MXRA8Q9BRK3 442 aa16.71■□□□□ 0.27
PTPN13-204ENST00000436978 AAASQ9NRG9 546 aa16.71■□□□□ 0.27
PTPN13-204ENST00000436978 STX18Q9P2W9 335 aaKnown RBP16.71■□□□□ 0.27
PTPN13-204ENST00000436978 TTC26A0AVF1 554 aa16.71■□□□□ 0.27
PTPN13-204ENST00000436978 DIAPH2O60879 1101 aa16.71■□□□□ 0.27
PTPN13-204ENST00000436978 TMEM8AQ9HCN3 771 aa16.71■□□□□ 0.27
PTPN13-204ENST00000436978 GGA3Q9NZ52 723 aa16.71■□□□□ 0.27
PTPN13-204ENST00000436978 INTUQ9ULD6 942 aa16.71■□□□□ 0.27
PTPN13-204ENST00000436978 AGAP1Q9UPQ3 857 aa16.71■□□□□ 0.27
PTPN13-204ENST00000436978 C3orf70A6NLC5 250 aaPredicted RBP16.71■□□□□ 0.27
PTPN13-204ENST00000436978 C17orf75Q9HAS0 396 aa16.71■□□□□ 0.27
PTPN13-204ENST00000436978 RGL1Q9NZL6 768 aa16.71■□□□□ 0.27
PTPN13-204ENST00000436978 TTC30BQ8N4P2 665 aa16.71■□□□□ 0.27
PTPN13-204ENST00000436978 SCFD2Q8WU76 684 aa16.71■□□□□ 0.27
PTPN13-204ENST00000436978 RIT2Q99578 217 aa16.71■□□□□ 0.27
PTPN13-204ENST00000436978 ZNF197O14709 1029 aa16.71■□□□□ 0.27
PTPN13-204ENST00000436978 FCGRTP55899 365 aa16.71■□□□□ 0.27
PTPN13-204ENST00000436978 AP2B1P63010 937 aa16.71■□□□□ 0.27
PTPN13-204ENST00000436978 CCDC195A0A1B0GUA6 201 aa16.71■□□□□ 0.26
PTPN13-204ENST00000436978 KITP10721 976 aa16.71■□□□□ 0.26
PTPN13-204ENST00000436978 DPYDQ12882 1025 aa16.71■□□□□ 0.26
PTPN13-204ENST00000436978 RNF180Q86T96 592 aa16.71■□□□□ 0.26
PTPN13-204ENST00000436978 TMEM143Q96AN5 459 aa16.71■□□□□ 0.26
PTPN13-204ENST00000436978 G3BP2Q9UN86 482 aaKnown RBP16.71■□□□□ 0.26
PTPN13-204ENST00000436978 BAZ2BQ9UIF8 2168 aaKnown RBP16.7■□□□□ 0.26
PTPN13-204ENST00000436978 ARHGAP10A1A4S6 786 aa16.7■□□□□ 0.26
PTPN13-204ENST00000436978 CYP26A1O43174 497 aa16.7■□□□□ 0.26
PTPN13-204ENST00000436978 CCDC22O60826 627 aa16.7■□□□□ 0.26
PTPN13-204ENST00000436978 RALBP11234 206 aa16.7■□□□□ 0.26
PTPN13-204ENST00000436978 FXR2P51116 673 aaKnown RBP eCLIP16.7■□□□□ 0.26
PTPN13-204ENST00000436978 MAGOHP61326 146 aaKnown RBP16.7■□□□□ 0.26
PTPN13-204ENST00000436978 FASTKD1Q53R41 847 aaKnown RBP16.7■□□□□ 0.26
PTPN13-204ENST00000436978 ANKRD13AQ8IZ07 590 aa16.7■□□□□ 0.26
PTPN13-204ENST00000436978 ARHGEF26Q96DR7 871 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms