RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 DNERQ8NFT8 737 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 MAGEB5Q9BZ81 275 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 HOMER3Q9NSC5 361 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 BTBD19C9JJ37 291 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 GJB1P08034 283 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 RAB27AP51159 221 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 HABP4Q5JVS0 413 aaKnown RBP12.87□□□□□ -0.35
UBE3B-203ENST00000434735 ZNF697Q5TEC3 545 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 HS6ST3Q8IZP7 471 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 CCDC51Q96ER9 411 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 CNOT8Q9UFF9 292 aaKnown RBP12.87□□□□□ -0.35
UBE3B-203ENST00000434735 NCKAP1Q9Y2A7 1128 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.87□□□□□ -0.35
UBE3B-203ENST00000434735 CLTAP09496 248 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 PNPLA4P41247 253 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 YWHAHQ04917 246 aaPredicted RBP12.87□□□□□ -0.35
UBE3B-203ENST00000434735 ZNF177Q13360 481 aaPredicted RBP12.87□□□□□ -0.35
UBE3B-203ENST00000434735 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.87□□□□□ -0.35
UBE3B-203ENST00000434735 TRIM58Q8NG06 486 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 MAGOHBQ96A72 148 aaKnown RBP12.87□□□□□ -0.35
UBE3B-203ENST00000434735 ANAPC7Q9UJX3 599 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 EMSYQ7Z589 1322 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 NCAM1P13591 858 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 ACO1P21399 889 aaKnown RBP12.87□□□□□ -0.35
UBE3B-203ENST00000434735 NCOA4Q13772 614 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 CCDC38Q502W7 563 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 DNAJC7Q99615 494 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 DPP3Q9NY33 737 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 TBC1D3BA6NDS4 549 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 LRRC63Q05C16 580 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 E2F5Q15329 346 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 NT5DC4Q86YG4 428 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 ULK4Q96C45 1275 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 HPDLQ96IR7 371 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 FGD4Q96M96 766 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 DESI2Q9BSY9 194 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 OSBPL3Q9H4L5 887 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 CDC42BPBQ9Y5S2 1711 aa12.87□□□□□ -0.35
UBE3B-203ENST00000434735 ZNF746Q6NUN9 644 aaPredicted RBP12.86□□□□□ -0.35
UBE3B-203ENST00000434735 ASS1P00966 412 aaKnown RBP12.86□□□□□ -0.35
UBE3B-203ENST00000434735 PLS3P13797 630 aa12.86□□□□□ -0.35
UBE3B-203ENST00000434735 PTPN21Q16825 1174 aa12.86□□□□□ -0.35
UBE3B-203ENST00000434735 ARHGAP18Q8N392 663 aa12.86□□□□□ -0.35
UBE3B-203ENST00000434735 FBXL13Q8NEE6 735 aa12.86□□□□□ -0.35
UBE3B-203ENST00000434735 FAF2Q96CS3 445 aa12.86□□□□□ -0.35
UBE3B-203ENST00000434735 RIT2Q99578 217 aa12.86□□□□□ -0.35
UBE3B-203ENST00000434735 SENP1Q9P0U3 644 aa12.86□□□□□ -0.35
UBE3B-203ENST00000434735 GRAP2O75791 330 aa12.86□□□□□ -0.35
UBE3B-203ENST00000434735 AKAP5P24588 427 aa12.86□□□□□ -0.35
UBE3B-203ENST00000434735 EEF1GP26641 437 aaKnown RBP12.86□□□□□ -0.35
UBE3B-203ENST00000434735 CASP1P29466 404 aa12.86□□□□□ -0.35
UBE3B-203ENST00000434735 NOP14P78316 857 aaKnown RBP12.86□□□□□ -0.35
UBE3B-203ENST00000434735 IL1RL1Q01638 556 aa12.86□□□□□ -0.35
UBE3B-203ENST00000434735 TRAPPC12Q8WVT3 735 aa12.86□□□□□ -0.35
UBE3B-203ENST00000434735 LRGUKQ96M69 825 aa12.86□□□□□ -0.35
UBE3B-203ENST00000434735 MED15Q96RN5 788 aa12.86□□□□□ -0.35
UBE3B-203ENST00000434735 NT5C1AQ9BXI3 368 aa12.86□□□□□ -0.35
UBE3B-203ENST00000434735 HSPBP1Q9NZL4 362 aa12.86□□□□□ -0.35
UBE3B-203ENST00000434735 SMIM24O75264 130 aa12.86□□□□□ -0.35
UBE3B-203ENST00000434735 ACRP10323 421 aa12.86□□□□□ -0.35
UBE3B-203ENST00000434735 KPNA2P52292 529 aaKnown RBP12.86□□□□□ -0.35
UBE3B-203ENST00000434735 WASHC5Q12768 1159 aa12.86□□□□□ -0.35
UBE3B-203ENST00000434735 TBCCQ15814 346 aa12.86□□□□□ -0.35
UBE3B-203ENST00000434735 PDZD8Q8NEN9 1154 aa12.86□□□□□ -0.35
UBE3B-203ENST00000434735 GIPC2Q8TF65 315 aa12.86□□□□□ -0.35
UBE3B-203ENST00000434735 DDX27Q96GQ7 796 aaKnown RBP12.86□□□□□ -0.35
UBE3B-203ENST00000434735 XPO6Q96QU8 1125 aaKnown RBP12.86□□□□□ -0.35
UBE3B-203ENST00000434735 TRIM54Q9BYV2 358 aa12.86□□□□□ -0.35
UBE3B-203ENST00000434735 QRICH2Q9H0J4 1663 aa12.86□□□□□ -0.35
UBE3B-203ENST00000434735 MYMKA6NI61 221 aa12.85□□□□□ -0.35
UBE3B-203ENST00000434735 AP1G2O75843 785 aa12.85□□□□□ -0.35
UBE3B-203ENST00000434735 PDIA6Q15084 440 aa12.85□□□□□ -0.35
UBE3B-203ENST00000434735 C10orf76Q5T2E6 689 aa12.85□□□□□ -0.35
UBE3B-203ENST00000434735 FOPNLQ96NB1 174 aa12.85□□□□□ -0.35
UBE3B-203ENST00000434735 CENPKQ9BS16 269 aa12.85□□□□□ -0.35
UBE3B-203ENST00000434735 CARD6Q9BX69 1037 aa12.85□□□□□ -0.35
UBE3B-203ENST00000434735 PASKQ96RG2 1323 aa12.85□□□□□ -0.35
UBE3B-203ENST00000434735 IGSF3O75054 1194 aa12.85□□□□□ -0.35
UBE3B-203ENST00000434735 MAP4P27816 1152 aaKnown RBP12.85□□□□□ -0.35
UBE3B-203ENST00000434735 HADHAP40939 763 aa12.85□□□□□ -0.35
UBE3B-203ENST00000434735 PHLDB3Q6NSJ2 640 aa12.85□□□□□ -0.35
UBE3B-203ENST00000434735 RNF10Q8N5U6 811 aaKnown RBP12.85□□□□□ -0.35
UBE3B-203ENST00000434735 RPRD1AQ96P16 312 aaPredicted RBP12.85□□□□□ -0.35
UBE3B-203ENST00000434735 CORO1BQ9BR76 489 aa12.85□□□□□ -0.35
UBE3B-203ENST00000434735 TIPINQ9BVW5 301 aa12.85□□□□□ -0.35
UBE3B-203ENST00000434735 C11orf49Q9H6J7 331 aa12.85□□□□□ -0.35
UBE3B-203ENST00000434735 KLHL14Q9P2G3 628 aa12.85□□□□□ -0.35
UBE3B-203ENST00000434735 A0A1B0GUA9 196 aa12.85□□□□□ -0.35
UBE3B-203ENST00000434735 GPR25O00155 361 aa12.85□□□□□ -0.35
UBE3B-203ENST00000434735 CTNNA1P35221 906 aaKnown RBP12.85□□□□□ -0.35
UBE3B-203ENST00000434735 PRKCZQ05513 592 aa12.85□□□□□ -0.35
UBE3B-203ENST00000434735 POLD3Q15054 466 aaPredicted RBP12.85□□□□□ -0.35
UBE3B-203ENST00000434735 PREPLQ4J6C6 727 aaPredicted RBP12.85□□□□□ -0.35
UBE3B-203ENST00000434735 NDST4Q9H3R1 872 aa12.85□□□□□ -0.35
UBE3B-203ENST00000434735 RSAD1Q9HA92 442 aa12.85□□□□□ -0.35
UBE3B-203ENST00000434735 EFEMP1Q12805 493 aa12.85□□□□□ -0.35
UBE3B-203ENST00000434735 LBRQ14739 615 aaKnown RBP12.85□□□□□ -0.35
UBE3B-203ENST00000434735 PLCL1Q15111 1095 aa12.85□□□□□ -0.35
UBE3B-203ENST00000434735 BBS9Q3SYG4 887 aa12.85□□□□□ -0.35
UBE3B-203ENST00000434735 KLC3Q6P597 504 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms