RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 ZEB2O60315 1214 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 ZC3H11AO75152 810 aaKnown RBP eCLIP8.03□□□□□ -1.12
COL17A1-204ENST00000433822 RAD17O75943 681 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 GGPS1O95749 300 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 INHAP05111 366 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 MYBL2P10244 700 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 ACTN1P12814 892 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 CD33P20138 364 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 GBP1P32455 592 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 HSPA9P38646 679 aaKnown RBP8.03□□□□□ -1.12
COL17A1-204ENST00000433822 TNNT3P45378 269 aaPredicted RBP8.03□□□□□ -1.12
COL17A1-204ENST00000433822 NAP1L1P55209 391 aaKnown RBP8.03□□□□□ -1.12
COL17A1-204ENST00000433822 PSMC5P62195 406 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 CXCL9Q07325 125 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 DRAP1Q14919 205 aaPredicted RBP8.03□□□□□ -1.12
COL17A1-204ENST00000433822 EPC2Q52LR7 807 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 ARSJQ5FYB0 599 aaPredicted RBP8.03□□□□□ -1.12
COL17A1-204ENST00000433822 DCAF15Q66K64 600 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 C11orf63Q6NUN7 778 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 CCDC174Q6PII3 467 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 LRIG3Q6UXM1 1119 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 LEKR1Q6ZMV7 388 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 NT5DC3Q86UY8 548 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 MAP4K3Q8IVH8 894 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 IQCKQ8N0W5 287 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 PHTF2Q8N3S3 785 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 XXYLT1Q8NBI6 393 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 DHX38Q92620 1227 aaKnown RBP8.03□□□□□ -1.12
COL17A1-204ENST00000433822 KIFAP3Q92845 792 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 FBXL18Q96ME1 805 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 TEPSINQ96N21 525 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 RUNDC3BQ96NL0 473 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.03□□□□□ -1.12
COL17A1-204ENST00000433822 GPR88Q9GZN0 384 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 TMEM39BQ9GZU3 492 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 INTS2Q9H0H0 1204 aaKnown RBP8.03□□□□□ -1.12
COL17A1-204ENST00000433822 TSPYL1Q9H0U9 437 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 ISCUQ9H1K1 167 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 SUGCTQ9HAC7 445 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 MYOZ2Q9NPC6 264 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 RBM12Q9NTZ6 932 aaKnown RBP8.03□□□□□ -1.12
COL17A1-204ENST00000433822 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.03□□□□□ -1.12
COL17A1-204ENST00000433822 WRAP73Q9P2S5 460 aaPredicted RBP8.03□□□□□ -1.12
COL17A1-204ENST00000433822 ZNF112Q9UJU3 913 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 DNAJC12Q9UKB3 198 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 ADAMTS5Q9UNA0 930 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 FAN1Q9Y2M0 1017 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 ZHX2Q9Y6X8 837 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 WDR81Q562E7 1941 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 TRIOBPQ9H2D6 2365 aa8.03□□□□□ -1.12
COL17A1-204ENST00000433822 RLFQ13129 1914 aa8.02□□□□□ -1.13
COL17A1-204ENST00000433822 C19orf81C9J6K1 198 aa8.02□□□□□ -1.13
COL17A1-204ENST00000433822 K7ENM7 598 aa8.02□□□□□ -1.13
COL17A1-204ENST00000433822 KHNYNO15037 678 aaKnown RBP8.02□□□□□ -1.13
COL17A1-204ENST00000433822 CLIC2O15247 247 aa8.02□□□□□ -1.13
COL17A1-204ENST00000433822 EXOC3O60645 756 aa8.02□□□□□ -1.13
COL17A1-204ENST00000433822 HSF2BPO75031 334 aa8.02□□□□□ -1.13
COL17A1-204ENST00000433822 ZBED4O75132 1171 aa8.02□□□□□ -1.13
COL17A1-204ENST00000433822 DDNO94850 711 aaPredicted RBP8.02□□□□□ -1.13
COL17A1-204ENST00000433822 HEXIM1O94992 359 aaKnown RBP8.02□□□□□ -1.13
COL17A1-204ENST00000433822 INPP5BP32019 993 aa8.02□□□□□ -1.13
COL17A1-204ENST00000433822 VAMP7P51809 220 aa8.02□□□□□ -1.13
COL17A1-204ENST00000433822 DRG2P55039 364 aaKnown RBP8.02□□□□□ -1.13
COL17A1-204ENST00000433822 MRPS9P82933 396 aaKnown RBP8.02□□□□□ -1.13
COL17A1-204ENST00000433822 KCNA1Q09470 495 aa8.02□□□□□ -1.13
COL17A1-204ENST00000433822 MTMR1Q13613 665 aa8.02□□□□□ -1.13
COL17A1-204ENST00000433822 MTMR3Q13615 1198 aa8.02□□□□□ -1.13
COL17A1-204ENST00000433822 PGM5Q15124 567 aa8.02□□□□□ -1.13
COL17A1-204ENST00000433822 ZSCAN26Q16670 478 aa8.02□□□□□ -1.13
COL17A1-204ENST00000433822 ZNF468Q5VIY5 522 aaPredicted RBP8.02□□□□□ -1.13
COL17A1-204ENST00000433822 SND1Q7KZF4 910 aaKnown RBP eCLIP8.02□□□□□ -1.13
COL17A1-204ENST00000433822 ENOSF1Q7L5Y1 443 aa8.02□□□□□ -1.13
COL17A1-204ENST00000433822 OTUD6AQ7L8S5 288 aa8.02□□□□□ -1.13
COL17A1-204ENST00000433822 PEX26Q7Z412 305 aa8.02□□□□□ -1.13
COL17A1-204ENST00000433822 MAATS1Q7Z4T9 603 aa8.02□□□□□ -1.13
COL17A1-204ENST00000433822 SYCP3Q8IZU3 236 aa8.02□□□□□ -1.13
COL17A1-204ENST00000433822 CCDC26Q8TAB7 109 aa8.02□□□□□ -1.13
COL17A1-204ENST00000433822 FAM76AQ8TAV0 307 aa8.02□□□□□ -1.13
COL17A1-204ENST00000433822 CTNNBL1Q8WYA6 563 aaPredicted RBP8.02□□□□□ -1.13
COL17A1-204ENST00000433822 LRRC45Q96CN5 670 aa8.02□□□□□ -1.13
COL17A1-204ENST00000433822 RPS6KC1Q96S38 1066 aa8.02□□□□□ -1.13
COL17A1-204ENST00000433822 PDCD2LQ9BRP1 358 aa8.02□□□□□ -1.13
COL17A1-204ENST00000433822 PACSIN1Q9BY11 444 aa8.02□□□□□ -1.13
COL17A1-204ENST00000433822 ZNF341Q9BYN7 854 aa8.02□□□□□ -1.13
COL17A1-204ENST00000433822 TAF1DQ9H5J8 278 aaPredicted RBP8.02□□□□□ -1.13
COL17A1-204ENST00000433822 AS3MTQ9HBK9 375 aa8.02□□□□□ -1.13
COL17A1-204ENST00000433822 VEZTQ9HBM0 779 aa8.02□□□□□ -1.13
COL17A1-204ENST00000433822 KIAA1586Q9HCI6 787 aa8.02□□□□□ -1.13
COL17A1-204ENST00000433822 ZCCHC17Q9NP64 241 aaKnown RBP8.02□□□□□ -1.13
COL17A1-204ENST00000433822 PXMP2Q9NR77 195 aa8.02□□□□□ -1.13
COL17A1-204ENST00000433822 FBXO28Q9NVF7 368 aa8.02□□□□□ -1.13
COL17A1-204ENST00000433822 COL20A1Q9P218 1284 aa8.02□□□□□ -1.13
COL17A1-204ENST00000433822 AMFRQ9UKV5 643 aa8.02□□□□□ -1.13
COL17A1-204ENST00000433822 PPME1Q9Y570 386 aa8.02□□□□□ -1.13
COL17A1-204ENST00000433822 PPP2R3BQ9Y5P8 575 aa8.02□□□□□ -1.13
COL17A1-204ENST00000433822 ASTN2O75129 1339 aaPredicted RBP8.02□□□□□ -1.13
COL17A1-204ENST00000433822 SYNGAP1Q96PV0 1343 aa8.02□□□□□ -1.13
COL17A1-204ENST00000433822 A0A0C4DFX4 3053 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 ARID2Q68CP9 1835 aa8.01□□□□□ -1.13
COL17A1-204ENST00000433822 SCO2A0A1W2PP80 73 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms