RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 OR6B3Q8NGW1 331 aa7.28□□□□□ -1.24
USP54-206ENST00000433394 PLBD2Q8NHP8 589 aa7.28□□□□□ -1.24
USP54-206ENST00000433394 STON2Q8WXE9 905 aa7.28□□□□□ -1.24
USP54-206ENST00000433394 TNPO1Q92973 898 aaKnown RBP7.28□□□□□ -1.24
USP54-206ENST00000433394 KRTAP4-12Q9BQ66 201 aa7.28□□□□□ -1.24
USP54-206ENST00000433394 UNKQ9C0B0 810 aaKnown RBP7.28□□□□□ -1.24
USP54-206ENST00000433394 C12orf65Q9H3J6 166 aaKnown RBP7.28□□□□□ -1.24
USP54-206ENST00000433394 STARD7Q9NQZ5 370 aa7.28□□□□□ -1.24
USP54-206ENST00000433394 CFAP97Q9P2B7 532 aa7.28□□□□□ -1.24
USP54-206ENST00000433394 HDAC5Q9UQL6 1122 aa7.28□□□□□ -1.24
USP54-206ENST00000433394 RUVBL1Q9Y265 456 aaKnown RBP7.28□□□□□ -1.24
USP54-206ENST00000433394 CEP83Q9Y592 693 aa7.28□□□□□ -1.24
USP54-206ENST00000433394 A0A1W2PRX2 142 aa7.27□□□□□ -1.25
USP54-206ENST00000433394 F5H423 210 aaPredicted RBP7.27□□□□□ -1.25
USP54-206ENST00000433394 SLC26A4O43511 780 aa7.27□□□□□ -1.25
USP54-206ENST00000433394 GNAI2P04899 355 aa7.27□□□□□ -1.25
USP54-206ENST00000433394 SNRPA1P09661 255 aaKnown RBP7.27□□□□□ -1.25
USP54-206ENST00000433394 PRIM2P49643 509 aa7.27□□□□□ -1.25
USP54-206ENST00000433394 RAC3P60763 192 aa7.27□□□□□ -1.25
USP54-206ENST00000433394 NFYCQ13952 458 aa7.27□□□□□ -1.25
USP54-206ENST00000433394 HABP2Q14520 560 aaPredicted RBP7.27□□□□□ -1.25
USP54-206ENST00000433394 CNGA2Q16280 664 aa7.27□□□□□ -1.25
USP54-206ENST00000433394 PDCD2Q16342 344 aaPredicted RBP7.27□□□□□ -1.25
USP54-206ENST00000433394 VWA3BQ502W6 1294 aa7.27□□□□□ -1.25
USP54-206ENST00000433394 CIAPIN1Q6FI81 312 aa7.27□□□□□ -1.25
USP54-206ENST00000433394 ZGPATQ8N5A5 531 aaKnown RBP7.27□□□□□ -1.25
USP54-206ENST00000433394 CCDC33Q8N5R6 958 aa7.27□□□□□ -1.25
USP54-206ENST00000433394 OR2C3Q8N628 320 aa7.27□□□□□ -1.25
USP54-206ENST00000433394 REPS2Q8NFH8 660 aa7.27□□□□□ -1.25
USP54-206ENST00000433394 FBXO18Q8NFZ0 1043 aa7.27□□□□□ -1.25
USP54-206ENST00000433394 IL31RAQ8NI17 732 aa7.27□□□□□ -1.25
USP54-206ENST00000433394 ANKS1AQ92625 1134 aa7.27□□□□□ -1.25
USP54-206ENST00000433394 TRIM63Q969Q1 353 aa7.27□□□□□ -1.25
USP54-206ENST00000433394 ZC3H10Q96K80 434 aaKnown RBP7.27□□□□□ -1.25
USP54-206ENST00000433394 RIPOR3Q96MK2 946 aa7.27□□□□□ -1.25
USP54-206ENST00000433394 TCF25Q9BQ70 676 aa7.27□□□□□ -1.25
USP54-206ENST00000433394 IL23AQ9NPF7 189 aa7.27□□□□□ -1.25
USP54-206ENST00000433394 ZDHHC8Q9ULC8 765 aa7.27□□□□□ -1.25
USP54-206ENST00000433394 PCDHA6Q9UN73 950 aa7.27□□□□□ -1.25
USP54-206ENST00000433394 ACTL7AQ9Y615 435 aa7.27□□□□□ -1.25
USP54-206ENST00000433394 ABHD14A-ACY1A0A1B0GW23 586 aa7.26□□□□□ -1.25
USP54-206ENST00000433394 B5MCH6 92 aa7.26□□□□□ -1.25
USP54-206ENST00000433394 TBC1D4O60343 1298 aa7.26□□□□□ -1.25
USP54-206ENST00000433394 TCEA3O75764 348 aa7.26□□□□□ -1.25
USP54-206ENST00000433394 PRDX5P30044 214 aa7.26□□□□□ -1.25
USP54-206ENST00000433394 PIK3CBP42338 1070 aa7.26□□□□□ -1.25
USP54-206ENST00000433394 ATP8B2P98198 1209 aa7.26□□□□□ -1.25
USP54-206ENST00000433394 ANO1Q5XXA6 986 aa7.26□□□□□ -1.25
USP54-206ENST00000433394 AFMIDQ63HM1 303 aa7.26□□□□□ -1.25
USP54-206ENST00000433394 SWSAP1Q6NVH7 229 aa7.26□□□□□ -1.25
USP54-206ENST00000433394 ZNF783Q6ZMS7 281 aa7.26□□□□□ -1.25
USP54-206ENST00000433394 PLXDC1Q8IUK5 500 aa7.26□□□□□ -1.25
USP54-206ENST00000433394 LINC01356Q8N9X3 169 aa7.26□□□□□ -1.25
USP54-206ENST00000433394 BHLHE22Q8NFJ8 381 aaPredicted RBP7.26□□□□□ -1.25
USP54-206ENST00000433394 SGCZQ96LD1 299 aa7.26□□□□□ -1.25
USP54-206ENST00000433394 NT5C1BQ96P26 610 aa7.26□□□□□ -1.25
USP54-206ENST00000433394 DMRTA2Q96SC8 542 aa7.26□□□□□ -1.25
USP54-206ENST00000433394 CERS4Q9HA82 394 aa7.26□□□□□ -1.25
USP54-206ENST00000433394 RSAD1Q9HA92 442 aa7.26□□□□□ -1.25
USP54-206ENST00000433394 SLAMF7Q9NQ25 335 aa7.26□□□□□ -1.25
USP54-206ENST00000433394 SERHLQ9NQF3 203 aa7.26□□□□□ -1.25
USP54-206ENST00000433394 CLCA2Q9UQC9 943 aa7.26□□□□□ -1.25
USP54-206ENST00000433394 PMS2P1A4D2B8 440 aa7.25□□□□□ -1.25
USP54-206ENST00000433394 KIAA0391O15091 583 aaKnown RBP7.25□□□□□ -1.25
USP54-206ENST00000433394 KPNA5O15131 536 aa7.25□□□□□ -1.25
USP54-206ENST00000433394 IL18RAPO95256 599 aa7.25□□□□□ -1.25
USP54-206ENST00000433394 ALOX15P16050 662 aaPredicted RBP7.25□□□□□ -1.25
USP54-206ENST00000433394 TNFSF4P23510 183 aa7.25□□□□□ -1.25
USP54-206ENST00000433394 PCSK1P29120 753 aa7.25□□□□□ -1.25
USP54-206ENST00000433394 SERPINB3P29508 390 aa7.25□□□□□ -1.25
USP54-206ENST00000433394 STT3AP46977 705 aa7.25□□□□□ -1.25
USP54-206ENST00000433394 ALDH1A3P47895 512 aa7.25□□□□□ -1.25
USP54-206ENST00000433394 LINC00310P59036 64 aa7.25□□□□□ -1.25
USP54-206ENST00000433394 DLX2Q07687 328 aaPredicted RBP7.25□□□□□ -1.25
USP54-206ENST00000433394 GRM1Q13255 1194 aa7.25□□□□□ -1.25
USP54-206ENST00000433394 KCNA10Q16322 511 aa7.25□□□□□ -1.25
USP54-206ENST00000433394 LCE3BQ5TA77 95 aa7.25□□□□□ -1.25
USP54-206ENST00000433394 TCERG1LQ5VWI1 586 aa7.25□□□□□ -1.25
USP54-206ENST00000433394 OTUD7BQ6GQQ9 843 aa7.25□□□□□ -1.25
USP54-206ENST00000433394 XRRA1Q6P2D8 792 aa7.25□□□□□ -1.25
USP54-206ENST00000433394 SHCBP1Q8NEM2 672 aa7.25□□□□□ -1.25
USP54-206ENST00000433394 KBTBD7Q8WVZ9 684 aa7.25□□□□□ -1.25
USP54-206ENST00000433394 SIK2Q9H0K1 926 aa7.25□□□□□ -1.25
USP54-206ENST00000433394 MRPL46Q9H2W6 279 aaKnown RBP7.25□□□□□ -1.25
USP54-206ENST00000433394 BRD9Q9H8M2 597 aa7.25□□□□□ -1.25
USP54-206ENST00000433394 PPCSQ9HAB8 311 aa7.25□□□□□ -1.25
USP54-206ENST00000433394 AFF4Q9UHB7 1163 aaKnown RBP7.25□□□□□ -1.25
USP54-206ENST00000433394 POM121BA6NF01 834 aa7.24□□□□□ -1.25
USP54-206ENST00000433394 MYO1CO00159 1063 aa7.24□□□□□ -1.25
USP54-206ENST00000433394 F2RL2O00254 374 aa7.24□□□□□ -1.25
USP54-206ENST00000433394 NPHP1O15259 732 aa7.24□□□□□ -1.25
USP54-206ENST00000433394 GRM6O15303 877 aa7.24□□□□□ -1.25
USP54-206ENST00000433394 PJA2O43164 708 aa7.24□□□□□ -1.25
USP54-206ENST00000433394 B4GALT4O60513 344 aa7.24□□□□□ -1.25
USP54-206ENST00000433394 TSPAN15O95858 294 aa7.24□□□□□ -1.25
USP54-206ENST00000433394 PARP1P09874 1014 aaKnown RBP7.24□□□□□ -1.25
USP54-206ENST00000433394 EN2P19622 333 aaPredicted RBP7.24□□□□□ -1.25
USP54-206ENST00000433394 RAP1GAPP47736 663 aa7.24□□□□□ -1.25
USP54-206ENST00000433394 SUMO3P55854 103 aaPredicted RBP7.24□□□□□ -1.25
USP54-206ENST00000433394 SOX8P57073 446 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms