RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 GLRA4Q5JXX5 417 aa16.36■□□□□ 0.21
PRKDC-203ENST00000432581 NT5DC1Q5TFE4 455 aa16.36■□□□□ 0.21
PRKDC-203ENST00000432581 NPAS3Q8IXF0 933 aa16.36■□□□□ 0.21
PRKDC-203ENST00000432581 RUBCNQ92622 972 aa16.36■□□□□ 0.21
PRKDC-203ENST00000432581 DDX27Q96GQ7 796 aaKnown RBP16.36■□□□□ 0.21
PRKDC-203ENST00000432581 C8orf76Q96K31 380 aa16.36■□□□□ 0.21
PRKDC-203ENST00000432581 HINFPQ9BQA5 517 aa16.36■□□□□ 0.21
PRKDC-203ENST00000432581 BHMT2Q9H2M3 363 aa16.36■□□□□ 0.21
PRKDC-203ENST00000432581 TOPORSQ9NS56 1045 aaPredicted RBP16.36■□□□□ 0.21
PRKDC-203ENST00000432581 GDE1Q9NZC3 331 aa16.36■□□□□ 0.21
PRKDC-203ENST00000432581 DNMT3BQ9UBC3 853 aaKnown RBP16.36■□□□□ 0.21
PRKDC-203ENST00000432581 TNFSF13BQ9Y275 285 aa16.36■□□□□ 0.21
PRKDC-203ENST00000432581 MRPS23Q9Y3D9 190 aaKnown RBP16.36■□□□□ 0.21
PRKDC-203ENST00000432581 STK24Q9Y6E0 443 aa16.36■□□□□ 0.21
PRKDC-203ENST00000432581 WDR87Q6ZQQ6 2873 aa16.36■□□□□ 0.21
PRKDC-203ENST00000432581 PHLPP2Q6ZVD8 1323 aa16.36■□□□□ 0.21
PRKDC-203ENST00000432581 LAMTOR5O43504 91 aa16.35■□□□□ 0.21
PRKDC-203ENST00000432581 TKTP29401 623 aaKnown RBP16.35■□□□□ 0.21
PRKDC-203ENST00000432581 CCT6AP40227 531 aaKnown RBP16.35■□□□□ 0.21
PRKDC-203ENST00000432581 TRAPPC10P48553 1259 aa16.35■□□□□ 0.21
PRKDC-203ENST00000432581 FXR2P51116 673 aaKnown RBP eCLIP16.35■□□□□ 0.214e-14■■■■■ 29.2
PRKDC-203ENST00000432581 UBXN2BQ14CS0 331 aa16.35■□□□□ 0.21
PRKDC-203ENST00000432581 TTC38Q5R3I4 469 aa16.35■□□□□ 0.21
PRKDC-203ENST00000432581 KXD1Q9BQD3 176 aa16.35■□□□□ 0.21
PRKDC-203ENST00000432581 CCDC94Q9BW85 323 aaPredicted RBP16.35■□□□□ 0.21
PRKDC-203ENST00000432581 AVENQ9NQS1 362 aaPredicted RBP16.35■□□□□ 0.21
PRKDC-203ENST00000432581 SLC38A7Q9NVC3 462 aa16.35■□□□□ 0.21
PRKDC-203ENST00000432581 HCFC1R1Q9NWW0 138 aa16.35■□□□□ 0.21
PRKDC-203ENST00000432581 FBXO4Q9UKT5 387 aa16.35■□□□□ 0.21
PRKDC-203ENST00000432581 OTOGLQ3ZCN5 2332 aa16.35■□□□□ 0.21
PRKDC-203ENST00000432581 SMIM28A0A1B0GU29 152 aa16.34■□□□□ 0.21
PRKDC-203ENST00000432581 FAM170BA6NMN3 283 aa16.34■□□□□ 0.21
PRKDC-203ENST00000432581 KINO60870 393 aaKnown RBP16.34■□□□□ 0.21
PRKDC-203ENST00000432581 LRRN2O75325 713 aa16.34■□□□□ 0.21
PRKDC-203ENST00000432581 ECI2O75521 394 aa16.34■□□□□ 0.21
PRKDC-203ENST00000432581 RHOP08100 348 aa16.34■□□□□ 0.21
PRKDC-203ENST00000432581 ELF1P32519 619 aa16.34■□□□□ 0.21
PRKDC-203ENST00000432581 GRM5P41594 1212 aa16.34■□□□□ 0.21
PRKDC-203ENST00000432581 ST3GAL1Q11201 340 aa16.34■□□□□ 0.21
PRKDC-203ENST00000432581 XKR4Q5GH76 650 aa16.34■□□□□ 0.21
PRKDC-203ENST00000432581 SLC8B1Q6J4K2 584 aa16.34■□□□□ 0.21
PRKDC-203ENST00000432581 CD300LGQ6UXG3 332 aa16.34■□□□□ 0.21
PRKDC-203ENST00000432581 KIAA2013Q8IYS2 634 aa16.34■□□□□ 0.21
PRKDC-203ENST00000432581 MAML2Q8IZL2 1156 aaPredicted RBP16.34■□□□□ 0.21
PRKDC-203ENST00000432581 ZNF461Q8TAF7 563 aa16.34■□□□□ 0.21
PRKDC-203ENST00000432581 ING5Q8WYH8 240 aa16.34■□□□□ 0.21
PRKDC-203ENST00000432581 LLPHQ9BRT6 129 aaKnown RBP16.34■□□□□ 0.21
PRKDC-203ENST00000432581 RAB34Q9BZG1 259 aa16.34■□□□□ 0.21
PRKDC-203ENST00000432581 GOLGA2P5Q9HBQ8 144 aa16.34■□□□□ 0.21
PRKDC-203ENST00000432581 LTB4R2Q9NPC1 389 aa16.34■□□□□ 0.21
PRKDC-203ENST00000432581 SPATA6Q9NWH7 488 aaPredicted RBP16.34■□□□□ 0.21
PRKDC-203ENST00000432581 LRWD1Q9UFC0 647 aa16.34■□□□□ 0.21
PRKDC-203ENST00000432581 KIAA1024Q9UPX6 916 aa16.34■□□□□ 0.21
PRKDC-203ENST00000432581 DCHS1Q96JQ0 3298 aa16.34■□□□□ 0.21
PRKDC-203ENST00000432581 GPR179Q6PRD1 2367 aa16.33■□□□□ 0.2
PRKDC-203ENST00000432581 ARHGEF37A1IGU5 675 aa16.33■□□□□ 0.2
PRKDC-203ENST00000432581 SPTLC1O15269 473 aa16.33■□□□□ 0.2
PRKDC-203ENST00000432581 NCAM2O15394 837 aa16.33■□□□□ 0.2
PRKDC-203ENST00000432581 LRG1P02750 347 aa16.33■□□□□ 0.2
PRKDC-203ENST00000432581 IGFBP6P24592 240 aaPredicted RBP16.33■□□□□ 0.2
PRKDC-203ENST00000432581 BRCC3P46736 316 aa16.33■□□□□ 0.2
PRKDC-203ENST00000432581 DMP1Q13316 513 aaPredicted RBP16.33■□□□□ 0.2
PRKDC-203ENST00000432581 GNL2Q13823 731 aaKnown RBP16.33■□□□□ 0.2
PRKDC-203ENST00000432581 PDIA5Q14554 519 aa16.33■□□□□ 0.2
PRKDC-203ENST00000432581 ECM1Q16610 540 aa16.33■□□□□ 0.2
PRKDC-203ENST00000432581 ZNF568Q3ZCX4 644 aa16.33■□□□□ 0.2
PRKDC-203ENST00000432581 ZBTB41Q5SVQ8 909 aa16.33■□□□□ 0.2
PRKDC-203ENST00000432581 ALKAL1Q6UXT8 129 aa16.33■□□□□ 0.2
PRKDC-203ENST00000432581 C3orf58Q8NDZ4 430 aa16.33■□□□□ 0.2
PRKDC-203ENST00000432581 RMDN1Q96DB5 314 aa16.33■□□□□ 0.2
PRKDC-203ENST00000432581 NELL2Q99435 816 aa16.33■□□□□ 0.2
PRKDC-203ENST00000432581 ACO2Q99798 780 aaKnown RBP16.33■□□□□ 0.2
PRKDC-203ENST00000432581 MRPL4Q9BYD3 311 aaKnown RBP16.33■□□□□ 0.2
PRKDC-203ENST00000432581 CDT1Q9H211 546 aa16.33■□□□□ 0.2
PRKDC-203ENST00000432581 TMEM134Q9H6X4 195 aa16.33■□□□□ 0.2
PRKDC-203ENST00000432581 POLD4Q9HCU8 107 aa16.33■□□□□ 0.2
PRKDC-203ENST00000432581 NOL7Q9UMY1 257 aaKnown RBP16.33■□□□□ 0.2
PRKDC-203ENST00000432581 LIMCH1Q9UPQ0 1083 aa16.33■□□□□ 0.2
PRKDC-203ENST00000432581 CCDC169A6NNP5 214 aa16.32■□□□□ 0.2
PRKDC-203ENST00000432581 H7C4K7 107 aa16.32■□□□□ 0.2
PRKDC-203ENST00000432581 I3L4J1 428 aa16.32■□□□□ 0.2
PRKDC-203ENST00000432581 PODXLO00592 558 aa16.32■□□□□ 0.2
PRKDC-203ENST00000432581 PRRG1O14668 218 aa16.32■□□□□ 0.2
PRKDC-203ENST00000432581 SYN3O14994 580 aa16.32■□□□□ 0.2
PRKDC-203ENST00000432581 ABLIM3O94929 683 aa16.32■□□□□ 0.2
PRKDC-203ENST00000432581 PTPN2P17706 415 aa16.32■□□□□ 0.2
PRKDC-203ENST00000432581 NPTX2P47972 431 aa16.32■□□□□ 0.2
PRKDC-203ENST00000432581 ROR1Q01973 937 aa16.32■□□□□ 0.2
PRKDC-203ENST00000432581 VARS2Q5ST30 1063 aaKnown RBP16.32■□□□□ 0.2
PRKDC-203ENST00000432581 ZNF852Q6ZMS4 543 aa16.32■□□□□ 0.2
PRKDC-203ENST00000432581 TPRG1Q6ZUI0 275 aa16.32■□□□□ 0.2
PRKDC-203ENST00000432581 SUMF1Q8NBK3 374 aa16.32■□□□□ 0.2
PRKDC-203ENST00000432581 FBXO18Q8NFZ0 1043 aa16.32■□□□□ 0.2
PRKDC-203ENST00000432581 SNX29Q8TEQ0 813 aa16.32■□□□□ 0.2
PRKDC-203ENST00000432581 MCRS1Q96EZ8 462 aa16.32■□□□□ 0.2
PRKDC-203ENST00000432581 PTPRHQ9HD43 1115 aa16.32■□□□□ 0.2
PRKDC-203ENST00000432581 DDX19AQ9NUU7 478 aaKnown RBP16.32■□□□□ 0.2
PRKDC-203ENST00000432581 MRPS17Q9Y2R5 130 aaKnown RBP16.32■□□□□ 0.2
PRKDC-203ENST00000432581 MTF2Q9Y483 593 aaPredicted RBP16.32■□□□□ 0.2
PRKDC-203ENST00000432581 RBM19Q9Y4C8 960 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms