RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 CCDC136Q96JN2 1154 aa17.52■□□□□ 0.4
NUP50-209ENST00000432340 CEP170P1Q96L14 293 aa17.52■□□□□ 0.4
NUP50-209ENST00000432340 SH2D3AQ9BRG2 576 aa17.52■□□□□ 0.4
NUP50-209ENST00000432340 NXF3Q9H4D5 531 aaKnown RBP17.52■□□□□ 0.4
NUP50-209ENST00000432340 DAXXQ9UER7 740 aaPredicted RBP17.52■□□□□ 0.4
NUP50-209ENST00000432340 CDY1Q9Y6F8 540 aa17.52■□□□□ 0.4
NUP50-209ENST00000432340 MYBPHLA2RUH7 354 aa17.51■□□□□ 0.39
NUP50-209ENST00000432340 SPECC1L-ADORA2AF8WAN1 911 aa17.51■□□□□ 0.39
NUP50-209ENST00000432340 INO80B-WBP1J3KQ70 363 aa17.51■□□□□ 0.39
NUP50-209ENST00000432340 ADAM12O43184 909 aa17.51■□□□□ 0.39
NUP50-209ENST00000432340 STBD1O95210 358 aa17.51■□□□□ 0.39
NUP50-209ENST00000432340 KIF4AO95239 1232 aa17.51■□□□□ 0.39
NUP50-209ENST00000432340 PLK5Q496M5 336 aa17.51■□□□□ 0.39
NUP50-209ENST00000432340 SLC27A1Q6PCB7 646 aa17.51■□□□□ 0.39
NUP50-209ENST00000432340 ANO5Q75V66 913 aa17.51■□□□□ 0.39
NUP50-209ENST00000432340 RAB11FIP4Q86YS3 637 aa17.51■□□□□ 0.39
NUP50-209ENST00000432340 ZSCAN18Q8TBC5 510 aaPredicted RBP17.51■□□□□ 0.39
NUP50-209ENST00000432340 HASPINQ8TF76 798 aa17.51■□□□□ 0.39
NUP50-209ENST00000432340 IL25Q9H293 177 aa17.51■□□□□ 0.39
NUP50-209ENST00000432340 SMOC1Q9H4F8 434 aa17.51■□□□□ 0.39
NUP50-209ENST00000432340 DHX33Q9H6R0 707 aaKnown RBP17.51■□□□□ 0.39
NUP50-209ENST00000432340 GPSM3Q9Y4H4 160 aa17.51■□□□□ 0.39
NUP50-209ENST00000432340 TAF6LQ9Y6J9 622 aa17.51■□□□□ 0.39
NUP50-209ENST00000432340 TMEM150BA6NC51 233 aa17.5■□□□□ 0.39
NUP50-209ENST00000432340 CASTOR2A6NHX0 329 aa17.5■□□□□ 0.39
NUP50-209ENST00000432340 SLC38A8A6NNN8 435 aa17.5■□□□□ 0.39
NUP50-209ENST00000432340 ARNTLO00327 626 aa17.5■□□□□ 0.39
NUP50-209ENST00000432340 SEC24BO95487 1268 aa17.5■□□□□ 0.39
NUP50-209ENST00000432340 THP07101 528 aa17.5■□□□□ 0.39
NUP50-209ENST00000432340 FGFR3P22607 806 aa17.5■□□□□ 0.39
NUP50-209ENST00000432340 AKAP5P24588 427 aa17.5■□□□□ 0.39
NUP50-209ENST00000432340 CTHP32929 405 aa17.5■□□□□ 0.39
NUP50-209ENST00000432340 PTENP60484 403 aa17.5■□□□□ 0.39
NUP50-209ENST00000432340 POU5F1BQ06416 359 aa17.5■□□□□ 0.39
NUP50-209ENST00000432340 CCINQ13939 588 aa17.5■□□□□ 0.39
NUP50-209ENST00000432340 TCEAL6Q6IPX3 200 aa17.5■□□□□ 0.39
NUP50-209ENST00000432340 B4GALNT3Q6L9W6 998 aa17.5■□□□□ 0.39
NUP50-209ENST00000432340 OTUD6AQ7L8S5 288 aa17.5■□□□□ 0.39
NUP50-209ENST00000432340 FERMT3Q86UX7 667 aa17.5■□□□□ 0.39
NUP50-209ENST00000432340 RABGGTAQ92696 567 aa17.5■□□□□ 0.39
NUP50-209ENST00000432340 TCEAL3Q969E4 200 aa17.5■□□□□ 0.39
NUP50-209ENST00000432340 TMEM143Q96AN5 459 aa17.5■□□□□ 0.39
NUP50-209ENST00000432340 ZNF512Q96ME7 567 aaPredicted RBP17.5■□□□□ 0.39
NUP50-209ENST00000432340 C22orf23Q9BZE7 217 aa17.5■□□□□ 0.39
NUP50-209ENST00000432340 RWDD1Q9H446 243 aaPredicted RBP17.5■□□□□ 0.39
NUP50-209ENST00000432340 SLITRK6Q9H5Y7 841 aa17.5■□□□□ 0.39
NUP50-209ENST00000432340 SPEGQ15772 3267 aa17.5■□□□□ 0.39
NUP50-209ENST00000432340 LNP1A1A4G5 178 aa17.49■□□□□ 0.39
NUP50-209ENST00000432340 BCLAF3A2AJT9 711 aaKnown RBP17.49■□□□□ 0.39
NUP50-209ENST00000432340 HEPACAM2A8MVW5 462 aa17.49■□□□□ 0.39
NUP50-209ENST00000432340 ZZEF1O43149 2961 aa17.49■□□□□ 0.39
NUP50-209ENST00000432340 PSMD10O75832 226 aa17.49■□□□□ 0.39
NUP50-209ENST00000432340 QARSP47897 775 aaKnown RBP17.49■□□□□ 0.39
NUP50-209ENST00000432340 FGD1P98174 961 aa17.49■□□□□ 0.39
NUP50-209ENST00000432340 PFKFB3Q16875 520 aaPredicted RBP17.49■□□□□ 0.39
NUP50-209ENST00000432340 SMC5Q8IY18 1101 aa17.49■□□□□ 0.39
NUP50-209ENST00000432340 GLIS3Q8NEA6 775 aa17.49■□□□□ 0.39
NUP50-209ENST00000432340 CPB2Q96IY4 423 aa17.49■□□□□ 0.39
NUP50-209ENST00000432340 MKNK1Q9BUB5 465 aa17.49■□□□□ 0.39
NUP50-209ENST00000432340 MAFFQ9ULX9 164 aa17.49■□□□□ 0.39
NUP50-209ENST00000432340 MYH9P35579 1960 aaKnown RBP17.49■□□□□ 0.39
NUP50-209ENST00000432340 MTCL1Q9Y4B5 1905 aaKnown RBP17.49■□□□□ 0.39
NUP50-209ENST00000432340 CCDC196A0A1B0GTZ2 297 aa17.48■□□□□ 0.39
NUP50-209ENST00000432340 ZBTB43O43298 467 aa17.48■□□□□ 0.39
NUP50-209ENST00000432340 HYAL3O43820 417 aaPredicted RBP17.48■□□□□ 0.39
NUP50-209ENST00000432340 TOP3BO95985 862 aaKnown RBP17.48■□□□□ 0.39
NUP50-209ENST00000432340 VIPR2P41587 438 aa17.48■□□□□ 0.39
NUP50-209ENST00000432340 PLCB2Q00722 1185 aa17.48■□□□□ 0.39
NUP50-209ENST00000432340 FCHO2Q0JRZ9 810 aa17.48■□□□□ 0.39
NUP50-209ENST00000432340 LMAN2Q12907 356 aa17.48■□□□□ 0.39
NUP50-209ENST00000432340 ARHGAP29Q52LW3 1261 aa17.48■□□□□ 0.39
NUP50-209ENST00000432340 PLA2G4FQ68DD2 849 aa17.48■□□□□ 0.39
NUP50-209ENST00000432340 KIAA1211LQ6NV74 962 aa17.48■□□□□ 0.39
NUP50-209ENST00000432340 APOA5Q6Q788 366 aa17.48■□□□□ 0.39
NUP50-209ENST00000432340 IFNLR1Q8IU57 520 aaPredicted RBP17.48■□□□□ 0.39
NUP50-209ENST00000432340 TCEAL8Q8IYN2 117 aa17.48■□□□□ 0.39
NUP50-209ENST00000432340 EXOC4Q96A65 974 aa17.48■□□□□ 0.39
NUP50-209ENST00000432340 ASAH2Q9NR71 780 aa17.48■□□□□ 0.39
NUP50-209ENST00000432340 KLK14Q9P0G3 267 aa17.48■□□□□ 0.39
NUP50-209ENST00000432340 RALGAPA1Q6GYQ0 2036 aa17.47■□□□□ 0.39
NUP50-209ENST00000432340 TMEM189-UBE2V1I3L0A0 370 aa17.47■□□□□ 0.39
NUP50-209ENST00000432340 DPYSL4O14531 572 aa17.47■□□□□ 0.39
NUP50-209ENST00000432340 EXTL3O43909 919 aa17.47■□□□□ 0.39
NUP50-209ENST00000432340 ATF2P15336 505 aa17.47■□□□□ 0.39
NUP50-209ENST00000432340 NUCB1Q02818 461 aa17.47■□□□□ 0.39
NUP50-209ENST00000432340 FUT2Q10981 343 aa17.47■□□□□ 0.39
NUP50-209ENST00000432340 GRSF1Q12849 480 aaKnown RBP eCLIP17.47■□□□□ 0.39
NUP50-209ENST00000432340 AAMPQ13685 434 aa17.47■□□□□ 0.39
NUP50-209ENST00000432340 EMC2Q15006 297 aa17.47■□□□□ 0.39
NUP50-209ENST00000432340 SLC8B1Q6J4K2 584 aa17.47■□□□□ 0.39
NUP50-209ENST00000432340 CCDC148Q8NFR7 591 aa17.47■□□□□ 0.39
NUP50-209ENST00000432340 TCEAL4Q96EI5 215 aa17.47■□□□□ 0.39
NUP50-209ENST00000432340 PAAF1Q9BRP4 392 aa17.47■□□□□ 0.39
NUP50-209ENST00000432340 CYP4F11Q9HBI6 524 aa17.47■□□□□ 0.39
NUP50-209ENST00000432340 RBM8AQ9Y5S9 174 aaKnown RBP17.47■□□□□ 0.39
NUP50-209ENST00000432340 B3GAT3O94766 335 aa17.46■□□□□ 0.39
NUP50-209ENST00000432340 ZIC2O95409 532 aaPredicted RBP17.46■□□□□ 0.39
NUP50-209ENST00000432340 NPTXRO95502 500 aa17.46■□□□□ 0.39
NUP50-209ENST00000432340 ARF4P18085 180 aaPredicted RBP17.46■□□□□ 0.39
NUP50-209ENST00000432340 PXNP49023 591 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms